RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZBTB7AO95365 584 aa27.47■■□□□ 1.99
PRKCH-219ENST00000555906 CGNL1Q0VF96 1302 aa27.46■■□□□ 1.99
PRKCH-219ENST00000555906 NSD2O96028 1365 aa27.46■■□□□ 1.99
PRKCH-219ENST00000555906 PTGER2P43116 358 aa27.45■■□□□ 1.98
PRKCH-219ENST00000555906 ZCRB1Q8TBF4 217 aaKnown RBP27.45■■□□□ 1.98
PRKCH-219ENST00000555906 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
PRKCH-219ENST00000555906 NBPF6Q5VWK0 638 aa27.44■■□□□ 1.98
PRKCH-219ENST00000555906 NBPF4Q96M43 638 aa27.44■■□□□ 1.98
PRKCH-219ENST00000555906 CARD14Q9BXL6 1004 aa27.44■■□□□ 1.98
PRKCH-219ENST00000555906 MTFR1LQ9H019 292 aa27.43■■□□□ 1.98
PRKCH-219ENST00000555906 SLC27A3Q5K4L6 730 aa27.42■■□□□ 1.98
PRKCH-219ENST00000555906 PCGF6Q9BYE7 350 aa27.42■■□□□ 1.98
PRKCH-219ENST00000555906 LRRC4BQ9NT99 713 aa27.42■■□□□ 1.98
PRKCH-219ENST00000555906 ZNF827Q17R98 1081 aa27.41■■□□□ 1.98
PRKCH-219ENST00000555906 MAP2P11137 1827 aaKnown RBP27.41■■□□□ 1.98
PRKCH-219ENST00000555906 COL24A1Q17RW2 1714 aa27.41■■□□□ 1.98
PRKCH-219ENST00000555906 HSP90AB2PQ58FF8 381 aa27.4■■□□□ 1.98
PRKCH-219ENST00000555906 USHBP1Q8N6Y0 703 aa27.4■■□□□ 1.98
PRKCH-219ENST00000555906 RAPGEF4Q8WZA2 1011 aa27.4■■□□□ 1.98
PRKCH-219ENST00000555906 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
PRKCH-219ENST00000555906 ATF5Q9Y2D1 282 aaPredicted RBP27.39■■□□□ 1.98
PRKCH-219ENST00000555906 PRIM1P49642 420 aaKnown RBP27.38■■□□□ 1.97
PRKCH-219ENST00000555906 SYTL4Q96C24 671 aaPredicted RBP27.38■■□□□ 1.97
PRKCH-219ENST00000555906 TOGARAM1Q9Y4F4 1720 aa27.38■■□□□ 1.97
PRKCH-219ENST00000555906 SGIP1Q9BQI5 828 aa27.37■■□□□ 1.97
PRKCH-219ENST00000555906 TATP17735 454 aaPredicted RBP27.36■■□□□ 1.97
PRKCH-219ENST00000555906 AKT1S1Q96B36 256 aa27.36■■□□□ 1.97
PRKCH-219ENST00000555906 PCDH11XQ9BZA7 1347 aa27.36■■□□□ 1.97
PRKCH-219ENST00000555906 PCDH11YQ9BZA8 1340 aa27.36■■□□□ 1.97
PRKCH-219ENST00000555906 DCAF8L1A6NGE4 600 aa27.35■■□□□ 1.97
PRKCH-219ENST00000555906 EMILIN1Q9Y6C2 1016 aa27.35■■□□□ 1.97
PRKCH-219ENST00000555906 C5P01031 1676 aa27.34■■□□□ 1.97
PRKCH-219ENST00000555906 ITGB4P16144 1822 aa27.34■■□□□ 1.97
PRKCH-219ENST00000555906 TAF1LQ8IZX4 1826 aa27.31■■□□□ 1.96
PRKCH-219ENST00000555906 MAP3K5Q99683 1374 aa27.31■■□□□ 1.96
PRKCH-219ENST00000555906 FHDC1Q9C0D6 1143 aaPredicted RBP27.3■■□□□ 1.96
PRKCH-219ENST00000555906 PNPLA7Q6ZV29 1317 aa27.29■■□□□ 1.96
PRKCH-219ENST00000555906 WASHC2AQ641Q2 1341 aa27.28■■□□□ 1.96
PRKCH-219ENST00000555906 YY1P25490 414 aa27.28■■□□□ 1.96
PRKCH-219ENST00000555906 EIF4G2P78344 907 aaKnown RBP eCLIP27.28■■□□□ 1.96
PRKCH-219ENST00000555906 SLC16A10Q8TF71 515 aa27.28■■□□□ 1.96
PRKCH-219ENST00000555906 UTRNP46939 3433 aa27.28■■□□□ 1.96
PRKCH-219ENST00000555906 ARXQ96QS3 562 aa27.27■■□□□ 1.96
PRKCH-219ENST00000555906 CCNL1Q9UK58 526 aaPredicted RBP27.27■■□□□ 1.96
PRKCH-219ENST00000555906 KCNQ4P56696 695 aa27.26■■□□□ 1.95
PRKCH-219ENST00000555906 SYT17Q9BSW7 474 aa27.26■■□□□ 1.95
PRKCH-219ENST00000555906 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
PRKCH-219ENST00000555906 TFCP2L1Q9NZI6 479 aa27.25■■□□□ 1.95
PRKCH-219ENST00000555906 CYP27B1O15528 508 aa27.24■■□□□ 1.95
PRKCH-219ENST00000555906 POLR3GLQ9BT43 218 aa27.24■■□□□ 1.95
PRKCH-219ENST00000555906 HSPA5P11021 654 aaKnown RBP27.23■■□□□ 1.95
PRKCH-219ENST00000555906 CHD4Q14839 1912 aa27.23■■□□□ 1.95
PRKCH-219ENST00000555906 PALLDQ8WX93 1383 aa27.22■■□□□ 1.95
PRKCH-219ENST00000555906 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
PRKCH-219ENST00000555906 POLKQ9UBT6 870 aa27.22■■□□□ 1.95
PRKCH-219ENST00000555906 C4BP0C0L5 1744 aa27.2■■□□□ 1.94
PRKCH-219ENST00000555906 CCER1Q8TC90 406 aaPredicted RBP27.2■■□□□ 1.94
PRKCH-219ENST00000555906 POLD1P28340 1107 aa27.19■■□□□ 1.94
PRKCH-219ENST00000555906 EYA1Q99502 592 aa27.19■■□□□ 1.94
PRKCH-219ENST00000555906 SPG7Q9UQ90 795 aa27.18■■□□□ 1.94
PRKCH-219ENST00000555906 HMGB2P26583 209 aaKnown RBP27.17■■□□□ 1.94
PRKCH-219ENST00000555906 NKX1-1Q15270 411 aaPredicted RBP27.17■■□□□ 1.94
PRKCH-219ENST00000555906 MPRIPQ6WCQ1 1025 aa27.17■■□□□ 1.94
PRKCH-219ENST00000555906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.17■■□□□ 1.94
PRKCH-219ENST00000555906 UBR3Q6ZT12 1888 aa27.16■■□□□ 1.94
PRKCH-219ENST00000555906 EIF4A2Q14240 407 aaKnown RBP27.14■■□□□ 1.94
PRKCH-219ENST00000555906 SMARCC1Q92922 1105 aaPredicted RBP27.14■■□□□ 1.94
PRKCH-219ENST00000555906 PANK3Q9H999 370 aa27.14■■□□□ 1.94
PRKCH-219ENST00000555906 TNNT2P45379 298 aaPredicted RBP27.12■■□□□ 1.93
PRKCH-219ENST00000555906 IGSF1Q8N6C5 1336 aa27.12■■□□□ 1.93
PRKCH-219ENST00000555906 COL23A1Q86Y22 540 aaPredicted RBP27.11■■□□□ 1.93
PRKCH-219ENST00000555906 GOLGB1Q14789 3259 aaKnown RBP27.1■■□□□ 1.93
PRKCH-219ENST00000555906 PIGBQ92521 554 aa27.1■■□□□ 1.93
PRKCH-219ENST00000555906 PHKG2P15735 406 aa27.08■■□□□ 1.93
PRKCH-219ENST00000555906 IFNL2Q8IZJ0 200 aa27.08■■□□□ 1.93
PRKCH-219ENST00000555906 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
PRKCH-219ENST00000555906 ZNF831Q5JPB2 1677 aa27.08■■□□□ 1.92
PRKCH-219ENST00000555906 MSH5O43196 834 aa27.07■■□□□ 1.92
PRKCH-219ENST00000555906 KLHL34Q8N239 644 aa27.06■■□□□ 1.92
PRKCH-219ENST00000555906 TMOD3Q9NYL9 352 aa27.06■■□□□ 1.92
PRKCH-219ENST00000555906 AK7Q96M32 723 aa27.04■■□□□ 1.92
PRKCH-219ENST00000555906 LOC102724428A0A0B4J2F2 783 aa27.02■■□□□ 1.92
PRKCH-219ENST00000555906 SIK1P57059 783 aa27.02■■□□□ 1.92
PRKCH-219ENST00000555906 MORC1Q86VD1 984 aa27.02■■□□□ 1.92
PRKCH-219ENST00000555906 COL5A3P25940 1745 aaPredicted RBP27.02■■□□□ 1.92
PRKCH-219ENST00000555906 MSL1Q68DK7 614 aa27.01■■□□□ 1.91
PRKCH-219ENST00000555906 NLGN2Q8NFZ4 835 aa27.01■■□□□ 1.91
PRKCH-219ENST00000555906 KDRP35968 1356 aa27■■□□□ 1.91
PRKCH-219ENST00000555906 GPR162Q16538 588 aa27■■□□□ 1.91
PRKCH-219ENST00000555906 KNSTRNQ9Y448 316 aa27■■□□□ 1.91
PRKCH-219ENST00000555906 HSP90AB1P08238 724 aaKnown RBP26.98■■□□□ 1.91
PRKCH-219ENST00000555906 ZNF784Q8NCA9 323 aaPredicted RBP26.98■■□□□ 1.91
PRKCH-219ENST00000555906 LINC00116Q8NCU8 138 aa26.98■■□□□ 1.91
PRKCH-219ENST00000555906 ASAP1Q9ULH1 1129 aa26.98■■□□□ 1.91
PRKCH-219ENST00000555906 KDM6AO15550 1401 aaPredicted RBP26.98■■□□□ 1.91
PRKCH-219ENST00000555906 KIF7Q2M1P5 1343 aa26.97■■□□□ 1.91
PRKCH-219ENST00000555906 SSFA2P28290 1259 aa26.97■■□□□ 1.91
PRKCH-219ENST00000555906 AMIGO3Q86WK7 504 aa26.97■■□□□ 1.91
PRKCH-219ENST00000555906 PLEKHO1Q53GL0 409 aaPredicted RBP26.96■■□□□ 1.91
PRKCH-219ENST00000555906 ATG3Q9NT62 314 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms