RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
ABCD4-223ENST00000555904 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
ABCD4-223ENST00000555904 MEGF6O75095 1541 aa16.55■□□□□ 0.24
ABCD4-223ENST00000555904 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
ABCD4-223ENST00000555904 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-223ENST00000555904 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
ABCD4-223ENST00000555904 GLI3P10071 1580 aa16.55■□□□□ 0.24
ABCD4-223ENST00000555904 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
ABCD4-223ENST00000555904 RXRBP28702 533 aa16.54■□□□□ 0.24
ABCD4-223ENST00000555904 DDB1Q16531 1140 aa16.53■□□□□ 0.24
ABCD4-223ENST00000555904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.241e-9■■□□□ 13.7
ABCD4-223ENST00000555904 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 EXOC5O00471 708 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
ABCD4-223ENST00000555904 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
ABCD4-223ENST00000555904 RGS17Q9UGC6 210 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-223ENST00000555904 TNS2Q63HR2 1409 aa16.52■□□□□ 0.23
ABCD4-223ENST00000555904 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
ABCD4-223ENST00000555904 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
ABCD4-223ENST00000555904 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
ABCD4-223ENST00000555904 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
ABCD4-223ENST00000555904 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-223ENST00000555904 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
ABCD4-223ENST00000555904 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
ABCD4-223ENST00000555904 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
ABCD4-223ENST00000555904 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
ABCD4-223ENST00000555904 LMOD3Q0VAK6 560 aa16.48■□□□□ 0.23
ABCD4-223ENST00000555904 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
ABCD4-223ENST00000555904 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
ABCD4-223ENST00000555904 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
ABCD4-223ENST00000555904 APAF1O14727 1248 aa16.47■□□□□ 0.23
ABCD4-223ENST00000555904 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
ABCD4-223ENST00000555904 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
ABCD4-223ENST00000555904 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
ABCD4-223ENST00000555904 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
ABCD4-223ENST00000555904 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
ABCD4-223ENST00000555904 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
ABCD4-223ENST00000555904 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
ABCD4-223ENST00000555904 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
ABCD4-223ENST00000555904 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
ABCD4-223ENST00000555904 PHKG2P15735 406 aa16.45■□□□□ 0.22
ABCD4-223ENST00000555904 RIPK4P57078 832 aa16.45■□□□□ 0.22
ABCD4-223ENST00000555904 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
ABCD4-223ENST00000555904 RGS12O14924 1447 aa16.44■□□□□ 0.22
ABCD4-223ENST00000555904 CYP27B1O15528 508 aa16.43■□□□□ 0.22
ABCD4-223ENST00000555904 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
ABCD4-223ENST00000555904 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
ABCD4-223ENST00000555904 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
ABCD4-223ENST00000555904 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
ABCD4-223ENST00000555904 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
ABCD4-223ENST00000555904 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
ABCD4-223ENST00000555904 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
ABCD4-223ENST00000555904 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
ABCD4-223ENST00000555904 MPRIPQ6WCQ1 1025 aa16.4■□□□□ 0.22
ABCD4-223ENST00000555904 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-223ENST00000555904 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-223ENST00000555904 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-223ENST00000555904 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
ABCD4-223ENST00000555904 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
ABCD4-223ENST00000555904 TEFQ10587 303 aa16.38■□□□□ 0.21
ABCD4-223ENST00000555904 MCM10Q7L590 875 aa16.38■□□□□ 0.21
ABCD4-223ENST00000555904 CABP4P57796 275 aa16.37■□□□□ 0.21
ABCD4-223ENST00000555904 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
ABCD4-223ENST00000555904 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-223ENST00000555904 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
ABCD4-223ENST00000555904 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
ABCD4-223ENST00000555904 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
ABCD4-223ENST00000555904 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
ABCD4-223ENST00000555904 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-223ENST00000555904 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
ABCD4-223ENST00000555904 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
ABCD4-223ENST00000555904 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
ABCD4-223ENST00000555904 BCL9O00512 1426 aa16.35■□□□□ 0.21
ABCD4-223ENST00000555904 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
ABCD4-223ENST00000555904 IL17REQ8NFR9 667 aa16.34■□□□□ 0.21
ABCD4-223ENST00000555904 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
ABCD4-223ENST00000555904 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
ABCD4-223ENST00000555904 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
ABCD4-223ENST00000555904 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
ABCD4-223ENST00000555904 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
ABCD4-223ENST00000555904 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
ABCD4-223ENST00000555904 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
ABCD4-223ENST00000555904 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.2
ABCD4-223ENST00000555904 MRC1P22897 1456 aa16.32■□□□□ 0.2
ABCD4-223ENST00000555904 DOT1LQ8TEK3 1739 aa16.32■□□□□ 0.2
ABCD4-223ENST00000555904 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
ABCD4-223ENST00000555904 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
ABCD4-223ENST00000555904 IL16Q14005 1332 aa16.31■□□□□ 0.2
ABCD4-223ENST00000555904 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
ABCD4-223ENST00000555904 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
ABCD4-223ENST00000555904 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
ABCD4-223ENST00000555904 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
ABCD4-223ENST00000555904 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
ABCD4-223ENST00000555904 GNAI1P63096 354 aa16.3■□□□□ 0.2
ABCD4-223ENST00000555904 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
ABCD4-223ENST00000555904 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms