RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 PANK3Q9H999 370 aa33.66■■■□□ 2.98
PRKCH-216ENST00000555542 ANKRD26Q9UPS8 1709 aa33.65■■■□□ 2.98
PRKCH-216ENST00000555542 PROM2Q8N271 834 aa33.65■■■□□ 2.98
PRKCH-216ENST00000555542 MAP2P11137 1827 aaKnown RBP33.65■■■□□ 2.98
PRKCH-216ENST00000555542 TATP17735 454 aaPredicted RBP33.63■■■□□ 2.97
PRKCH-216ENST00000555542 TNNT2P45379 298 aaPredicted RBP33.63■■■□□ 2.97
PRKCH-216ENST00000555542 ANO8Q9HCE9 1232 aaPredicted RBP33.63■■■□□ 2.97
PRKCH-216ENST00000555542 SHANK3Q9BYB0 1731 aa33.62■■■□□ 2.97
PRKCH-216ENST00000555542 SYTL4Q96C24 671 aaPredicted RBP33.62■■■□□ 2.97
PRKCH-216ENST00000555542 DOT1LQ8TEK3 1739 aa33.6■■■□□ 2.97
PRKCH-216ENST00000555542 STK32BQ9NY57 414 aa33.6■■■□□ 2.97
PRKCH-216ENST00000555542 WASHC2AQ641Q2 1341 aa33.56■■■□□ 2.96
PRKCH-216ENST00000555542 PRIM1P49642 420 aaKnown RBP33.55■■■□□ 2.96
PRKCH-216ENST00000555542 SPON1Q9HCB6 807 aa33.55■■■□□ 2.96
PRKCH-216ENST00000555542 POLKQ9UBT6 870 aa33.55■■■□□ 2.96
PRKCH-216ENST00000555542 NSD2O96028 1365 aa33.53■■■□□ 2.96
PRKCH-216ENST00000555542 PCDH11XQ9BZA7 1347 aa33.53■■■□□ 2.96
PRKCH-216ENST00000555542 PCDH11YQ9BZA8 1340 aa33.53■■■□□ 2.96
PRKCH-216ENST00000555542 SLC15A2Q16348 729 aa33.52■■■□□ 2.96
PRKCH-216ENST00000555542 PPP1R1BQ9UD71 204 aaPredicted RBP33.51■■■□□ 2.95
PRKCH-216ENST00000555542 KNSTRNQ9Y448 316 aa33.51■■■□□ 2.95
PRKCH-216ENST00000555542 CASZ1Q86V15 1759 aa33.49■■■□□ 2.95
PRKCH-216ENST00000555542 MORC1Q86VD1 984 aa33.48■■■□□ 2.95
PRKCH-216ENST00000555542 KIF7Q2M1P5 1343 aa33.48■■■□□ 2.95
PRKCH-216ENST00000555542 EYA1Q99502 592 aa33.46■■■□□ 2.95
PRKCH-216ENST00000555542 PDGFDQ9GZP0 370 aaPredicted RBP33.45■■■□□ 2.95
PRKCH-216ENST00000555542 PAPPAQ13219 1627 aa33.44■■■□□ 2.94
PRKCH-216ENST00000555542 SLC27A3Q5K4L6 730 aa33.44■■■□□ 2.94
PRKCH-216ENST00000555542 PKD1L3Q7Z443 1732 aa33.44■■■□□ 2.94
PRKCH-216ENST00000555542 ZBTB7AO95365 584 aa33.43■■■□□ 2.94
PRKCH-216ENST00000555542 EIF4A2Q14240 407 aaKnown RBP33.43■■■□□ 2.94
PRKCH-216ENST00000555542 LRRC4BQ9NT99 713 aa33.43■■■□□ 2.94
PRKCH-216ENST00000555542 SPG7Q9UQ90 795 aa33.43■■■□□ 2.94
PRKCH-216ENST00000555542 NCAPD2Q15021 1401 aa33.43■■■□□ 2.94
PRKCH-216ENST00000555542 CYP27B1O15528 508 aa33.39■■■□□ 2.94
PRKCH-216ENST00000555542 LY75O60449 1722 aa33.38■■■□□ 2.93
PRKCH-216ENST00000555542 KCNQ4P56696 695 aa33.37■■■□□ 2.93
PRKCH-216ENST00000555542 ZNF827Q17R98 1081 aa33.37■■■□□ 2.93
PRKCH-216ENST00000555542 ATF5Q9Y2D1 282 aaPredicted RBP33.37■■■□□ 2.93
PRKCH-216ENST00000555542 MPRIPQ6WCQ1 1025 aa33.36■■■□□ 2.93
PRKCH-216ENST00000555542 CCNL1Q9UK58 526 aaPredicted RBP33.36■■■□□ 2.93
PRKCH-216ENST00000555542 MTFR1LQ9H019 292 aa33.33■■■□□ 2.93
PRKCH-216ENST00000555542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.32■■■□□ 2.92
PRKCH-216ENST00000555542 TOGARAM1Q9Y4F4 1720 aa33.32■■■□□ 2.92
PRKCH-216ENST00000555542 ITGB4P16144 1822 aa33.31■■■□□ 2.92
PRKCH-216ENST00000555542 AMER1Q5JTC6 1135 aaPredicted RBP33.31■■■□□ 2.92
PRKCH-216ENST00000555542 AKT1S1Q96B36 256 aa33.31■■■□□ 2.92
PRKCH-216ENST00000555542 IGSF1Q8N6C5 1336 aa33.3■■■□□ 2.92
PRKCH-216ENST00000555542 TFCP2L1Q9NZI6 479 aa33.3■■■□□ 2.92
PRKCH-216ENST00000555542 IFNL2Q8IZJ0 200 aa33.28■■■□□ 2.92
PRKCH-216ENST00000555542 PALLDQ8WX93 1383 aa33.27■■■□□ 2.92
PRKCH-216ENST00000555542 NKX1-1Q15270 411 aaPredicted RBP33.27■■■□□ 2.92
PRKCH-216ENST00000555542 QSER1Q2KHR3 1735 aa33.26■■■□□ 2.92
PRKCH-216ENST00000555542 PTGER2P43116 358 aa33.26■■■□□ 2.91
PRKCH-216ENST00000555542 PHKG2P15735 406 aa33.25■■■□□ 2.91
PRKCH-216ENST00000555542 CC2D1BQ5T0F9 858 aaKnown RBP33.25■■■□□ 2.91
PRKCH-216ENST00000555542 SMARCC1Q92922 1105 aaPredicted RBP33.24■■■□□ 2.91
PRKCH-216ENST00000555542 TUBGCP6Q96RT7 1819 aa33.23■■■□□ 2.91
PRKCH-216ENST00000555542 PLEKHG2Q9H7P9 1386 aa33.23■■■□□ 2.91
PRKCH-216ENST00000555542 TMOD3Q9NYL9 352 aa33.23■■■□□ 2.91
PRKCH-216ENST00000555542 DCAF8L1A6NGE4 600 aa33.22■■■□□ 2.91
PRKCH-216ENST00000555542 CNGB1Q14028 1251 aaPredicted RBP33.22■■■□□ 2.91
PRKCH-216ENST00000555542 PIGBQ92521 554 aa33.22■■■□□ 2.91
PRKCH-216ENST00000555542 C5P01031 1676 aa33.22■■■□□ 2.91
PRKCH-216ENST00000555542 PNPLA7Q6ZV29 1317 aa33.22■■■□□ 2.91
PRKCH-216ENST00000555542 HMGB2P26583 209 aaKnown RBP33.21■■■□□ 2.91
PRKCH-216ENST00000555542 PLEKHO1Q53GL0 409 aaPredicted RBP33.21■■■□□ 2.91
PRKCH-216ENST00000555542 PER1O15534 1290 aaPredicted RBP33.2■■■□□ 2.91
PRKCH-216ENST00000555542 MSH5O43196 834 aa33.19■■■□□ 2.9
PRKCH-216ENST00000555542 MTHFSP49914 203 aa33.18■■■□□ 2.9
PRKCH-216ENST00000555542 SULT6B1Q6IMI4 303 aa33.18■■■□□ 2.9
PRKCH-216ENST00000555542 AEBP1Q8IUX7 1158 aa33.18■■■□□ 2.9
PRKCH-216ENST00000555542 SLC16A10Q8TF71 515 aa33.18■■■□□ 2.9
PRKCH-216ENST00000555542 AMOTQ4VCS5 1084 aa33.17■■■□□ 2.9
PRKCH-216ENST00000555542 HSP90AB1P08238 724 aaKnown RBP33.16■■■□□ 2.9
PRKCH-216ENST00000555542 ZNF530Q6P9A1 599 aaPredicted RBP33.16■■■□□ 2.9
PRKCH-216ENST00000555542 IL13P35225 146 aa33.15■■■□□ 2.9
PRKCH-216ENST00000555542 TAF1LQ8IZX4 1826 aa33.15■■■□□ 2.9
PRKCH-216ENST00000555542 ARXQ96QS3 562 aa33.15■■■□□ 2.9
PRKCH-216ENST00000555542 SGIP1Q9BQI5 828 aa33.14■■■□□ 2.9
PRKCH-216ENST00000555542 POLD1P28340 1107 aa33.13■■■□□ 2.89
PRKCH-216ENST00000555542 C1orf141Q5JVX7 400 aa33.13■■■□□ 2.89
PRKCH-216ENST00000555542 FHDC1Q9C0D6 1143 aaPredicted RBP33.13■■■□□ 2.89
PRKCH-216ENST00000555542 DCAF5Q96JK2 942 aa33.11■■■□□ 2.89
PRKCH-216ENST00000555542 AK7Q96M32 723 aa33.1■■■□□ 2.89
PRKCH-216ENST00000555542 ASAP1Q9ULH1 1129 aa33.1■■■□□ 2.89
PRKCH-216ENST00000555542 C4BP0C0L5 1744 aa33.09■■■□□ 2.89
PRKCH-216ENST00000555542 KDRP35968 1356 aa33.09■■■□□ 2.89
PRKCH-216ENST00000555542 NPC1L1Q9UHC9 1359 aa33.09■■■□□ 2.89
PRKCH-216ENST00000555542 LOC102724428A0A0B4J2F2 783 aa33.08■■■□□ 2.89
PRKCH-216ENST00000555542 ERVV-2B6SEH9 535 aa33.08■■■□□ 2.89
PRKCH-216ENST00000555542 SIK1P57059 783 aa33.08■■■□□ 2.89
PRKCH-216ENST00000555542 COL23A1Q86Y22 540 aaPredicted RBP33.08■■■□□ 2.89
PRKCH-216ENST00000555542 KLHL34Q8N239 644 aa33.08■■■□□ 2.89
PRKCH-216ENST00000555542 SYT17Q9BSW7 474 aa33.08■■■□□ 2.89
PRKCH-216ENST00000555542 DIAPH1O60610 1272 aaKnown RBP33.06■■■□□ 2.88
PRKCH-216ENST00000555542 CABP4P57796 275 aa33.05■■■□□ 2.88
PRKCH-216ENST00000555542 FLAD1Q8NFF5 587 aa33.05■■■□□ 2.88
PRKCH-216ENST00000555542 HMOX1P09601 288 aa33.04■■■□□ 2.88
PRKCH-216ENST00000555542 ATP6V1AP38606 617 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms