RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
AC004828.1-201ENST00000555303 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
AC004828.1-201ENST00000555303 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
AC004828.1-201ENST00000555303 DDX54Q8TDD1 881 aaKnown RBP12.49□□□□□ -0.41
AC004828.1-201ENST00000555303 FBLN1P23142 703 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
AC004828.1-201ENST00000555303 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
AC004828.1-201ENST00000555303 PCDH11XQ9BZA7 1347 aa12.47□□□□□ -0.41
AC004828.1-201ENST00000555303 PCDH11YQ9BZA8 1340 aa12.47□□□□□ -0.41
AC004828.1-201ENST00000555303 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC004828.1-201ENST00000555303 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
AC004828.1-201ENST00000555303 NSD2O96028 1365 aa12.46□□□□□ -0.41
AC004828.1-201ENST00000555303 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
AC004828.1-201ENST00000555303 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
AC004828.1-201ENST00000555303 C5P01031 1676 aa12.45□□□□□ -0.42
AC004828.1-201ENST00000555303 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
AC004828.1-201ENST00000555303 HMGB2P26583 209 aaKnown RBP12.45□□□□□ -0.42
AC004828.1-201ENST00000555303 ITGB4P16144 1822 aa12.45□□□□□ -0.42
AC004828.1-201ENST00000555303 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
AC004828.1-201ENST00000555303 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 PTGER2P43116 358 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
AC004828.1-201ENST00000555303 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
AC004828.1-201ENST00000555303 USHBP1Q8N6Y0 703 aa12.43□□□□□ -0.42
AC004828.1-201ENST00000555303 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
AC004828.1-201ENST00000555303 PDGFDQ9GZP0 370 aaPredicted RBP12.43□□□□□ -0.42
AC004828.1-201ENST00000555303 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
AC004828.1-201ENST00000555303 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
AC004828.1-201ENST00000555303 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
AC004828.1-201ENST00000555303 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
AC004828.1-201ENST00000555303 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
AC004828.1-201ENST00000555303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC004828.1-201ENST00000555303 POLKQ9UBT6 870 aa12.4□□□□□ -0.42
AC004828.1-201ENST00000555303 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
AC004828.1-201ENST00000555303 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
AC004828.1-201ENST00000555303 POLR3GLQ9BT43 218 aa12.39□□□□□ -0.43
AC004828.1-201ENST00000555303 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
AC004828.1-201ENST00000555303 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
AC004828.1-201ENST00000555303 UTRNP46939 3433 aa12.39□□□□□ -0.43
AC004828.1-201ENST00000555303 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 C4BP0C0L5 1744 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 CYP27B1O15528 508 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 CHD4Q14839 1912 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
AC004828.1-201ENST00000555303 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
AC004828.1-201ENST00000555303 ARXQ96QS3 562 aa12.37□□□□□ -0.43
AC004828.1-201ENST00000555303 EYA1Q99502 592 aa12.37□□□□□ -0.43
AC004828.1-201ENST00000555303 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
AC004828.1-201ENST00000555303 ZNF831Q5JPB2 1677 aa12.37□□□□□ -0.43
AC004828.1-201ENST00000555303 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
AC004828.1-201ENST00000555303 POLD1P28340 1107 aa12.36□□□□□ -0.43
AC004828.1-201ENST00000555303 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
AC004828.1-201ENST00000555303 PANK3Q9H999 370 aa12.36□□□□□ -0.43
AC004828.1-201ENST00000555303 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
AC004828.1-201ENST00000555303 YY1P25490 414 aa12.35□□□□□ -0.43
AC004828.1-201ENST00000555303 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
AC004828.1-201ENST00000555303 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
AC004828.1-201ENST00000555303 GOLGB1Q14789 3259 aaKnown RBP12.34□□□□□ -0.43
AC004828.1-201ENST00000555303 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
AC004828.1-201ENST00000555303 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
AC004828.1-201ENST00000555303 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
AC004828.1-201ENST00000555303 PHKG2P15735 406 aa12.33□□□□□ -0.44
AC004828.1-201ENST00000555303 TNNT2P45379 298 aaPredicted RBP12.33□□□□□ -0.44
AC004828.1-201ENST00000555303 KCNQ4P56696 695 aa12.33□□□□□ -0.44
AC004828.1-201ENST00000555303 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
AC004828.1-201ENST00000555303 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
AC004828.1-201ENST00000555303 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
AC004828.1-201ENST00000555303 PIGBQ92521 554 aa12.31□□□□□ -0.44
AC004828.1-201ENST00000555303 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
AC004828.1-201ENST00000555303 KDRP35968 1356 aa12.3□□□□□ -0.44
AC004828.1-201ENST00000555303 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
AC004828.1-201ENST00000555303 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
AC004828.1-201ENST00000555303 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
AC004828.1-201ENST00000555303 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
AC004828.1-201ENST00000555303 SCN11AQ9UI33 1791 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 SIK1P57059 783 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 PLEKHO1Q53GL0 409 aaPredicted RBP12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 AK7Q96M32 723 aa12.29□□□□□ -0.44
AC004828.1-201ENST00000555303 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
AC004828.1-201ENST00000555303 MSH5O43196 834 aa12.28□□□□□ -0.44
AC004828.1-201ENST00000555303 SSFA2P28290 1259 aa12.28□□□□□ -0.44
AC004828.1-201ENST00000555303 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
AC004828.1-201ENST00000555303 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
AC004828.1-201ENST00000555303 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
AC004828.1-201ENST00000555303 ZNF530Q6P9A1 599 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms