RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 HSP90AB2PQ58FF8 381 aa14.16□□□□□ -0.14
HNRNPC-218ENST00000555215 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
HNRNPC-218ENST00000555215 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
HNRNPC-218ENST00000555215 TMF1P82094 1093 aa14.15□□□□□ -0.14
HNRNPC-218ENST00000555215 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
HNRNPC-218ENST00000555215 SHANK3Q9BYB0 1731 aa14.15□□□□□ -0.14
HNRNPC-218ENST00000555215 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.15
HNRNPC-218ENST00000555215 ARXQ96QS3 562 aa14.14□□□□□ -0.15
HNRNPC-218ENST00000555215 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
HNRNPC-218ENST00000555215 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
HNRNPC-218ENST00000555215 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
HNRNPC-218ENST00000555215 DOT1LQ8TEK3 1739 aa14.11□□□□□ -0.15
HNRNPC-218ENST00000555215 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
HNRNPC-218ENST00000555215 CYP27B1O15528 508 aa14.1□□□□□ -0.15
HNRNPC-218ENST00000555215 INSRP06213 1382 aa14.09□□□□□ -0.15
HNRNPC-218ENST00000555215 TUBGCP6Q96RT7 1819 aa14.09□□□□□ -0.15
HNRNPC-218ENST00000555215 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
HNRNPC-218ENST00000555215 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
HNRNPC-218ENST00000555215 LY75O60449 1722 aa14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 ZNF784Q8NCA9 323 aaPredicted RBP14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 NLGN2Q8NFZ4 835 aa14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
HNRNPC-218ENST00000555215 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 AMIGO3Q86WK7 504 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 FLT4P35916 1363 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 GOLGB1Q14789 3259 aaKnown RBP14.07□□□□□ -0.16
HNRNPC-218ENST00000555215 MSL1Q68DK7 614 aa14.05□□□□□ -0.16
HNRNPC-218ENST00000555215 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
HNRNPC-218ENST00000555215 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
HNRNPC-218ENST00000555215 COL24A1Q17RW2 1714 aa14.04□□□□□ -0.16
HNRNPC-218ENST00000555215 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
HNRNPC-218ENST00000555215 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
HNRNPC-218ENST00000555215 QSER1Q2KHR3 1735 aa14.04□□□□□ -0.16
HNRNPC-218ENST00000555215 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 EYA1Q99502 592 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 PCGF6Q9BYE7 350 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 POLKQ9UBT6 870 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
HNRNPC-218ENST00000555215 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
HNRNPC-218ENST00000555215 NCAPD2Q15021 1401 aa14.02□□□□□ -0.16
HNRNPC-218ENST00000555215 KIF24Q5T7B8 1368 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 MSH5O43196 834 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 POLD1P28340 1107 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 GPR162Q16538 588 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 PIGBQ92521 554 aa14.02□□□□□ -0.17
HNRNPC-218ENST00000555215 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
HNRNPC-218ENST00000555215 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.17
HNRNPC-218ENST00000555215 POLR3GLQ9BT43 218 aa14.01□□□□□ -0.17
HNRNPC-218ENST00000555215 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
HNRNPC-218ENST00000555215 NKX1-1Q15270 411 aaPredicted RBP14□□□□□ -0.17
HNRNPC-218ENST00000555215 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
HNRNPC-218ENST00000555215 CHD4Q14839 1912 aa13.99□□□□□ -0.17
HNRNPC-218ENST00000555215 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-218ENST00000555215 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
HNRNPC-218ENST00000555215 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
HNRNPC-218ENST00000555215 MAP2P11137 1827 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-218ENST00000555215 ITGB4P16144 1822 aa13.98□□□□□ -0.17
HNRNPC-218ENST00000555215 HSPA5P11021 654 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 ITPK1Q13572 414 aa13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 C5P01031 1676 aa13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
HNRNPC-218ENST00000555215 ANKRD26Q9UPS8 1709 aa13.96□□□□□ -0.17
HNRNPC-218ENST00000555215 PHKG2P15735 406 aa13.96□□□□□ -0.17
HNRNPC-218ENST00000555215 PANK3Q9H999 370 aa13.96□□□□□ -0.17
HNRNPC-218ENST00000555215 PHF14O94880 888 aa13.95□□□□□ -0.18
HNRNPC-218ENST00000555215 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
HNRNPC-218ENST00000555215 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
HNRNPC-218ENST00000555215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 C4BP0C0L5 1744 aa13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 SIK1P57059 783 aa13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
HNRNPC-218ENST00000555215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.182e-20■□□□□ 8.3
HNRNPC-218ENST00000555215 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
HNRNPC-218ENST00000555215 AK7Q96M32 723 aa13.93□□□□□ -0.18
HNRNPC-218ENST00000555215 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
HNRNPC-218ENST00000555215 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 C1QTNF8P60827 252 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
HNRNPC-218ENST00000555215 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
HNRNPC-218ENST00000555215 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
HNRNPC-218ENST00000555215 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
HNRNPC-218ENST00000555215 ATP6V1AP38606 617 aa13.9□□□□□ -0.18
HNRNPC-218ENST00000555215 GNPATO15228 680 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms