RNA–Protein interactions for RNA: ENST00000554902.5

PNN-204, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-204ENST00000554902 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
PNN-204ENST00000554902 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
PNN-204ENST00000554902 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
PNN-204ENST00000554902 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
PNN-204ENST00000554902 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
PNN-204ENST00000554902 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
PNN-204ENST00000554902 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
PNN-204ENST00000554902 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
PNN-204ENST00000554902 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 SPINT1O43278 529 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.022e-17■□□□□ 9.6
PNN-204ENST00000554902 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 AGBL1Q96MI9 1066 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 PCDHB11Q9Y5F2 797 aa8.7□□□□□ -1.02
PNN-204ENST00000554902 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
PNN-204ENST00000554902 RELBQ01201 579 aa8.69□□□□□ -1.02
PNN-204ENST00000554902 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
PNN-204ENST00000554902 SKIP12755 728 aa8.68□□□□□ -1.02
PNN-204ENST00000554902 TBC1D9Q6ZT07 1266 aa8.68□□□□□ -1.02
PNN-204ENST00000554902 CDCA7Q9BWT1 371 aaPredicted RBP8.68□□□□□ -1.02
PNN-204ENST00000554902 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
PNN-204ENST00000554902 PLPP7Q8NBV4 271 aa8.67□□□□□ -1.02
PNN-204ENST00000554902 CYLDQ9NQC7 956 aa8.67□□□□□ -1.02
PNN-204ENST00000554902 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
PNN-204ENST00000554902 ZSCAN1Q8NBB4 408 aa8.66□□□□□ -1.02
PNN-204ENST00000554902 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
PNN-204ENST00000554902 CHIC2Q9UKJ5 165 aa8.66□□□□□ -1.02
PNN-204ENST00000554902 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 LILRA1O75019 489 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 SCTRP47872 440 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 PTSQ03393 145 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 OXLD1Q5BKU9 147 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 INSM2Q96T92 566 aaPredicted RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
PNN-204ENST00000554902 POLMQ9NP87 494 aaPredicted RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
PNN-204ENST00000554902 FAM181BA6NEQ2 426 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 USP17L5A8MUK1 530 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 ATP9BO43861 1147 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 ADH1AP07327 375 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
PNN-204ENST00000554902 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
PNN-204ENST00000554902 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
PNN-204ENST00000554902 NCOA4Q13772 614 aa8.63□□□□□ -1.03
PNN-204ENST00000554902 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
PNN-204ENST00000554902 CCDC97Q96F63 343 aaPredicted RBP8.63□□□□□ -1.03
PNN-204ENST00000554902 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
PNN-204ENST00000554902 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
PNN-204ENST00000554902 PTGIRP43119 386 aa8.62□□□□□ -1.03
PNN-204ENST00000554902 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
PNN-204ENST00000554902 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
PNN-204ENST00000554902 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
PNN-204ENST00000554902 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
PNN-204ENST00000554902 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
PNN-204ENST00000554902 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
PNN-204ENST00000554902 SLC35F4A4IF30 521 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 MYCP01106 439 aaPredicted RBP8.6□□□□□ -1.03
PNN-204ENST00000554902 RFX1P22670 979 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 LMOD1P29536 600 aaPredicted RBP8.6□□□□□ -1.03
PNN-204ENST00000554902 USP4Q13107 963 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 EML3Q32P44 896 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 RNF217Q8TC41 542 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 ESF1Q9H501 851 aaKnown RBP8.6□□□□□ -1.03
PNN-204ENST00000554902 SERPINA10Q9UK55 444 aa8.6□□□□□ -1.03
PNN-204ENST00000554902 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
PNN-204ENST00000554902 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
PNN-204ENST00000554902 ARID3AQ99856 593 aa8.58□□□□□ -1.04
PNN-204ENST00000554902 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
PNN-204ENST00000554902 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
PNN-204ENST00000554902 FOXD4L5Q5VV16 416 aaPredicted RBP8.57□□□□□ -1.04
PNN-204ENST00000554902 NANOS1Q8WY41 292 aaKnown RBP8.57□□□□□ -1.04
PNN-204ENST00000554902 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
PNN-204ENST00000554902 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
PNN-204ENST00000554902 ITGA6P23229 1130 aa8.56□□□□□ -1.04
PNN-204ENST00000554902 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
PNN-204ENST00000554902 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
PNN-204ENST00000554902 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
PNN-204ENST00000554902 LYSMD3Q7Z3D4 306 aa8.55□□□□□ -1.04
PNN-204ENST00000554902 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
PNN-204ENST00000554902 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 RNF144AP50876 292 aaPredicted RBP8.54□□□□□ -1.04
PNN-204ENST00000554902 GTF2IP78347 998 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
PNN-204ENST00000554902 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 VWA5B2Q8N398 1253 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
PNN-204ENST00000554902 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
PNN-204ENST00000554902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms