RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
SPTLC2-202ENST00000554365 UTRNP46939 3433 aa19.49■□□□□ 0.71
SPTLC2-202ENST00000554365 PNPLA7Q6ZV29 1317 aa19.49■□□□□ 0.71
SPTLC2-202ENST00000554365 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
SPTLC2-202ENST00000554365 USP47Q96K76 1375 aa19.48■□□□□ 0.71
SPTLC2-202ENST00000554365 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
SPTLC2-202ENST00000554365 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
SPTLC2-202ENST00000554365 TFCP2L1Q9NZI6 479 aa19.48■□□□□ 0.71
SPTLC2-202ENST00000554365 SLC24A1O60721 1099 aa19.47■□□□□ 0.71
SPTLC2-202ENST00000554365 POLD1P28340 1107 aa19.47■□□□□ 0.71
SPTLC2-202ENST00000554365 GPR162Q16538 588 aa19.47■□□□□ 0.71
SPTLC2-202ENST00000554365 MEGF6O75095 1541 aa19.46■□□□□ 0.71
SPTLC2-202ENST00000554365 RRS1Q15050 365 aaKnown RBP19.46■□□□□ 0.71
SPTLC2-202ENST00000554365 RGPD2P0DJD1 1756 aa19.46■□□□□ 0.71
SPTLC2-202ENST00000554365 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
SPTLC2-202ENST00000554365 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
SPTLC2-202ENST00000554365 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
SPTLC2-202ENST00000554365 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
SPTLC2-202ENST00000554365 QSER1Q2KHR3 1735 aa19.45■□□□□ 0.7
SPTLC2-202ENST00000554365 NSD2O96028 1365 aa19.44■□□□□ 0.7
SPTLC2-202ENST00000554365 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
SPTLC2-202ENST00000554365 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
SPTLC2-202ENST00000554365 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
SPTLC2-202ENST00000554365 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
SPTLC2-202ENST00000554365 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
SPTLC2-202ENST00000554365 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
SPTLC2-202ENST00000554365 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
SPTLC2-202ENST00000554365 TUBGCP6Q96RT7 1819 aa19.42■□□□□ 0.7
SPTLC2-202ENST00000554365 FYB1O15117 783 aa19.42■□□□□ 0.7
SPTLC2-202ENST00000554365 MSH5O43196 834 aa19.42■□□□□ 0.7
SPTLC2-202ENST00000554365 RAPGEF4Q8WZA2 1011 aa19.42■□□□□ 0.7
SPTLC2-202ENST00000554365 CHD4Q14839 1912 aa19.41■□□□□ 0.7
SPTLC2-202ENST00000554365 TMF1P82094 1093 aa19.41■□□□□ 0.7
SPTLC2-202ENST00000554365 LY75O60449 1722 aa19.41■□□□□ 0.7
SPTLC2-202ENST00000554365 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
SPTLC2-202ENST00000554365 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
SPTLC2-202ENST00000554365 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
SPTLC2-202ENST00000554365 NLGN2Q8NFZ4 835 aa19.38■□□□□ 0.69
SPTLC2-202ENST00000554365 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
SPTLC2-202ENST00000554365 COL23A1Q86Y22 540 aaPredicted RBP19.37■□□□□ 0.69
SPTLC2-202ENST00000554365 INSRP06213 1382 aa19.36■□□□□ 0.69
SPTLC2-202ENST00000554365 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
SPTLC2-202ENST00000554365 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
SPTLC2-202ENST00000554365 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
SPTLC2-202ENST00000554365 C1QTNF8P60827 252 aa19.35■□□□□ 0.69
SPTLC2-202ENST00000554365 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
SPTLC2-202ENST00000554365 FLT4P35916 1363 aa19.34■□□□□ 0.69
SPTLC2-202ENST00000554365 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
SPTLC2-202ENST00000554365 CDCA8Q53HL2 280 aa19.33■□□□□ 0.68
SPTLC2-202ENST00000554365 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
SPTLC2-202ENST00000554365 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
SPTLC2-202ENST00000554365 C5P01031 1676 aa19.32■□□□□ 0.68
SPTLC2-202ENST00000554365 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
SPTLC2-202ENST00000554365 KIF24Q5T7B8 1368 aa19.31■□□□□ 0.68
SPTLC2-202ENST00000554365 CYP27B1O15528 508 aa19.3■□□□□ 0.68
SPTLC2-202ENST00000554365 GIGYF1O75420 1035 aaPredicted RBP19.3■□□□□ 0.68
SPTLC2-202ENST00000554365 YBX3P16989 372 aaKnown RBP eCLIP19.3■□□□□ 0.68
SPTLC2-202ENST00000554365 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
SPTLC2-202ENST00000554365 PPM1GO15355 546 aaPredicted RBP19.29■□□□□ 0.68
SPTLC2-202ENST00000554365 GRIN3BO60391 1043 aa19.29■□□□□ 0.68
SPTLC2-202ENST00000554365 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
SPTLC2-202ENST00000554365 NSD3Q9BZ95 1437 aa19.28■□□□□ 0.68
SPTLC2-202ENST00000554365 FLAD1Q8NFF5 587 aa19.28■□□□□ 0.68
SPTLC2-202ENST00000554365 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
SPTLC2-202ENST00000554365 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.68
SPTLC2-202ENST00000554365 SMARCC1Q92922 1105 aaPredicted RBP19.27■□□□□ 0.68
SPTLC2-202ENST00000554365 AK7Q96M32 723 aa19.27■□□□□ 0.68
SPTLC2-202ENST00000554365 TOGARAM1Q9Y4F4 1720 aa19.26■□□□□ 0.67
SPTLC2-202ENST00000554365 PHF14O94880 888 aa19.25■□□□□ 0.67
SPTLC2-202ENST00000554365 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
SPTLC2-202ENST00000554365 PIGBQ92521 554 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 C4BP0C0L5 1744 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 PKD1L3Q7Z443 1732 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
SPTLC2-202ENST00000554365 ITGB4P16144 1822 aa19.23■□□□□ 0.67
SPTLC2-202ENST00000554365 SMIM5Q71RC9 77 aa19.23■□□□□ 0.67
SPTLC2-202ENST00000554365 KIF7Q2M1P5 1343 aa19.23■□□□□ 0.67
SPTLC2-202ENST00000554365 AMIGO3Q86WK7 504 aa19.22■□□□□ 0.67
SPTLC2-202ENST00000554365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.21■□□□□ 0.67
SPTLC2-202ENST00000554365 NCAPD2Q15021 1401 aa19.2■□□□□ 0.66
SPTLC2-202ENST00000554365 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
SPTLC2-202ENST00000554365 EYA1Q99502 592 aa19.2■□□□□ 0.66
SPTLC2-202ENST00000554365 TMOD3Q9NYL9 352 aa19.2■□□□□ 0.66
SPTLC2-202ENST00000554365 LOC102724428A0A0B4J2F2 783 aa19.19■□□□□ 0.66
SPTLC2-202ENST00000554365 SIK1P57059 783 aa19.19■□□□□ 0.66
SPTLC2-202ENST00000554365 POLR3GLQ9BT43 218 aa19.19■□□□□ 0.66
SPTLC2-202ENST00000554365 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
SPTLC2-202ENST00000554365 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
SPTLC2-202ENST00000554365 ANKRD26Q9UPS8 1709 aa19.18■□□□□ 0.66
SPTLC2-202ENST00000554365 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
SPTLC2-202ENST00000554365 SSFA2P28290 1259 aa19.17■□□□□ 0.66
SPTLC2-202ENST00000554365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPTLC2-202ENST00000554365 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
SPTLC2-202ENST00000554365 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
SPTLC2-202ENST00000554365 UBR3Q6ZT12 1888 aa19.17■□□□□ 0.66
SPTLC2-202ENST00000554365 PHKG2P15735 406 aa19.16■□□□□ 0.66
SPTLC2-202ENST00000554365 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
SPTLC2-202ENST00000554365 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms