RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 FLT4P35916 1363 aa16.46■□□□□ 0.23
TRAPPC6B-204ENST00000554018 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
TRAPPC6B-204ENST00000554018 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
TRAPPC6B-204ENST00000554018 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
TRAPPC6B-204ENST00000554018 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC6B-204ENST00000554018 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
TRAPPC6B-204ENST00000554018 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC6B-204ENST00000554018 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
TRAPPC6B-204ENST00000554018 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
TRAPPC6B-204ENST00000554018 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
TRAPPC6B-204ENST00000554018 SLC15A2Q16348 729 aa16.42■□□□□ 0.22
TRAPPC6B-204ENST00000554018 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
TRAPPC6B-204ENST00000554018 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC6B-204ENST00000554018 PANK3Q9H999 370 aa16.41■□□□□ 0.22
TRAPPC6B-204ENST00000554018 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
TRAPPC6B-204ENST00000554018 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC6B-204ENST00000554018 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
TRAPPC6B-204ENST00000554018 LY75O60449 1722 aa16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 ZBTB7AO95365 584 aa16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
TRAPPC6B-204ENST00000554018 NSD2O96028 1365 aa16.38■□□□□ 0.21
TRAPPC6B-204ENST00000554018 ITGB4P16144 1822 aa16.38■□□□□ 0.21
TRAPPC6B-204ENST00000554018 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
TRAPPC6B-204ENST00000554018 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC6B-204ENST00000554018 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
TRAPPC6B-204ENST00000554018 KCNQ4P56696 695 aa16.36■□□□□ 0.21
TRAPPC6B-204ENST00000554018 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
TRAPPC6B-204ENST00000554018 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
TRAPPC6B-204ENST00000554018 EYA1Q99502 592 aa16.35■□□□□ 0.21
TRAPPC6B-204ENST00000554018 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
TRAPPC6B-204ENST00000554018 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
TRAPPC6B-204ENST00000554018 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
TRAPPC6B-204ENST00000554018 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
TRAPPC6B-204ENST00000554018 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
TRAPPC6B-204ENST00000554018 CYP27B1O15528 508 aa16.34■□□□□ 0.21
TRAPPC6B-204ENST00000554018 PTGER2P43116 358 aa16.34■□□□□ 0.21
TRAPPC6B-204ENST00000554018 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
TRAPPC6B-204ENST00000554018 UTRNP46939 3433 aa16.33■□□□□ 0.2
TRAPPC6B-204ENST00000554018 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
TRAPPC6B-204ENST00000554018 MTFR1LQ9H019 292 aa16.31■□□□□ 0.2
TRAPPC6B-204ENST00000554018 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 TAF1LQ8IZX4 1826 aa16.3■□□□□ 0.2
TRAPPC6B-204ENST00000554018 C5P01031 1676 aa16.28■□□□□ 0.2
TRAPPC6B-204ENST00000554018 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
TRAPPC6B-204ENST00000554018 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
TRAPPC6B-204ENST00000554018 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
TRAPPC6B-204ENST00000554018 PNPLA7Q6ZV29 1317 aa16.27■□□□□ 0.2
TRAPPC6B-204ENST00000554018 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC6B-204ENST00000554018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.23e-9■□□□□ 10.6
TRAPPC6B-204ENST00000554018 COL24A1Q17RW2 1714 aa16.26■□□□□ 0.19
TRAPPC6B-204ENST00000554018 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
TRAPPC6B-204ENST00000554018 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
TRAPPC6B-204ENST00000554018 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC6B-204ENST00000554018 PIGBQ92521 554 aa16.25■□□□□ 0.19
TRAPPC6B-204ENST00000554018 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC6B-204ENST00000554018 PHKG2P15735 406 aa16.24■□□□□ 0.19
TRAPPC6B-204ENST00000554018 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
TRAPPC6B-204ENST00000554018 ARXQ96QS3 562 aa16.24■□□□□ 0.19
TRAPPC6B-204ENST00000554018 SLC16A10Q8TF71 515 aa16.23■□□□□ 0.19
TRAPPC6B-204ENST00000554018 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
TRAPPC6B-204ENST00000554018 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
TRAPPC6B-204ENST00000554018 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
TRAPPC6B-204ENST00000554018 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC6B-204ENST00000554018 MSH5O43196 834 aa16.21■□□□□ 0.19
TRAPPC6B-204ENST00000554018 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC6B-204ENST00000554018 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
TRAPPC6B-204ENST00000554018 C4BP0C0L5 1744 aa16.21■□□□□ 0.19
TRAPPC6B-204ENST00000554018 UBR3Q6ZT12 1888 aa16.2■□□□□ 0.18
TRAPPC6B-204ENST00000554018 PER1O15534 1290 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC6B-204ENST00000554018 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
TRAPPC6B-204ENST00000554018 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
TRAPPC6B-204ENST00000554018 IL13P35225 146 aa16.19■□□□□ 0.18
TRAPPC6B-204ENST00000554018 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC6B-204ENST00000554018 CC2D1BQ5T0F9 858 aaKnown RBP16.19■□□□□ 0.18
TRAPPC6B-204ENST00000554018 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
TRAPPC6B-204ENST00000554018 POLD1P28340 1107 aa16.18■□□□□ 0.18
TRAPPC6B-204ENST00000554018 MTHFSP49914 203 aa16.18■□□□□ 0.18
TRAPPC6B-204ENST00000554018 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC6B-204ENST00000554018 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
TRAPPC6B-204ENST00000554018 SIK1P57059 783 aa16.17■□□□□ 0.18
TRAPPC6B-204ENST00000554018 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
TRAPPC6B-204ENST00000554018 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
TRAPPC6B-204ENST00000554018 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
TRAPPC6B-204ENST00000554018 MAP3K5Q99683 1374 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 CHD4Q14839 1912 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 YY1P25490 414 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
TRAPPC6B-204ENST00000554018 KDRP35968 1356 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms