RNA–Protein interactions for RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 SHANK3Q9BYB0 1731 aa39.57■■■■□ 3.92
LINC01578-201ENST00000553829 KCNQ2O43526 872 aa39.56■■■■□ 3.92
LINC01578-201ENST00000553829 EYA1Q99502 592 aa39.56■■■■□ 3.92
LINC01578-201ENST00000553829 RGPD3A6NKT7 1758 aaPredicted RBP39.55■■■■□ 3.92
LINC01578-201ENST00000553829 RGPD4Q7Z3J3 1758 aa39.55■■■■□ 3.92
LINC01578-201ENST00000553829 NCAPD2Q15021 1401 aa39.55■■■■□ 3.92
LINC01578-201ENST00000553829 NHSQ6T4R5 1651 aa39.54■■■■□ 3.92
LINC01578-201ENST00000553829 EIF4A2Q14240 407 aaKnown RBP39.54■■■■□ 3.92
LINC01578-201ENST00000553829 ACSBG1Q96GR2 724 aa39.54■■■■□ 3.92
LINC01578-201ENST00000553829 NUP188Q5SRE5 1749 aa39.48■■■■□ 3.91
LINC01578-201ENST00000553829 NPC1L1Q9UHC9 1359 aa39.48■■■■□ 3.91
LINC01578-201ENST00000553829 CC2D1BQ5T0F9 858 aaKnown RBP39.48■■■■□ 3.91
LINC01578-201ENST00000553829 PSDA5PKW4 1024 aaPredicted RBP39.44■■■■□ 3.9
LINC01578-201ENST00000553829 PROM2Q8N271 834 aa39.44■■■■□ 3.9
LINC01578-201ENST00000553829 BTAF1O14981 1849 aa39.44■■■■□ 3.9
LINC01578-201ENST00000553829 NBPF14Q5TI25 921 aa39.42■■■■□ 3.9
LINC01578-201ENST00000553829 SRCAPQ6ZRS2 3230 aa39.42■■■■□ 3.9
LINC01578-201ENST00000553829 R3HDM1Q15032 1099 aaKnown RBP39.41■■■■□ 3.9
LINC01578-201ENST00000553829 PCDH11XQ9BZA7 1347 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PCDH11YQ9BZA8 1340 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PKD1L3Q7Z443 1732 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 IGSF1Q8N6C5 1336 aa39.4■■■■□ 3.9
LINC01578-201ENST00000553829 PRIM1P49642 420 aaKnown RBP39.38■■■■□ 3.89
LINC01578-201ENST00000553829 MTHFSP49914 203 aa39.38■■■■□ 3.89
LINC01578-201ENST00000553829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP39.38■■■■□ 3.89
LINC01578-201ENST00000553829 DOT1LQ8TEK3 1739 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 TXNRD1Q16881 649 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 SPG7Q9UQ90 795 aa39.37■■■■□ 3.89
LINC01578-201ENST00000553829 CYP27B1O15528 508 aa39.36■■■■□ 3.89
LINC01578-201ENST00000553829 IL13P35225 146 aa39.33■■■■□ 3.89
LINC01578-201ENST00000553829 SYTL4Q96C24 671 aaPredicted RBP39.33■■■■□ 3.89
LINC01578-201ENST00000553829 CNGB1Q14028 1251 aaPredicted RBP39.31■■■■□ 3.88
LINC01578-201ENST00000553829 PLEKHG2Q9H7P9 1386 aa39.31■■■■□ 3.88
LINC01578-201ENST00000553829 NKX1-1Q15270 411 aaPredicted RBP39.28■■■■□ 3.88
LINC01578-201ENST00000553829 IFNL2Q8IZJ0 200 aa39.24■■■■□ 3.87
LINC01578-201ENST00000553829 AEBP1Q8IUX7 1158 aa39.23■■■■□ 3.87
LINC01578-201ENST00000553829 ANO8Q9HCE9 1232 aaPredicted RBP39.23■■■■□ 3.87
LINC01578-201ENST00000553829 ITGB4P16144 1822 aa39.23■■■■□ 3.87
LINC01578-201ENST00000553829 SULT6B1Q6IMI4 303 aa39.22■■■■□ 3.87
LINC01578-201ENST00000553829 PHKG2P15735 406 aa39.21■■■■□ 3.87
LINC01578-201ENST00000553829 KDRP35968 1356 aa39.21■■■■□ 3.87
LINC01578-201ENST00000553829 PLEKHO1Q53GL0 409 aaPredicted RBP39.2■■■■□ 3.87
LINC01578-201ENST00000553829 DIAPH1O60610 1272 aaKnown RBP39.19■■■■□ 3.86
LINC01578-201ENST00000553829 TOGARAM1Q9Y4F4 1720 aa39.19■■■■□ 3.86
LINC01578-201ENST00000553829 LY75O60449 1722 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 AMOTQ4VCS5 1084 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 SLC27A3Q5K4L6 730 aa39.18■■■■□ 3.86
LINC01578-201ENST00000553829 LRRC4BQ9NT99 713 aa39.17■■■■□ 3.86
LINC01578-201ENST00000553829 MPRIPQ6WCQ1 1025 aa39.16■■■■□ 3.86
LINC01578-201ENST00000553829 STK32BQ9NY57 414 aa39.16■■■■□ 3.86
LINC01578-201ENST00000553829 LRP5O75197 1615 aa39.15■■■■□ 3.86
LINC01578-201ENST00000553829 SLC15A2Q16348 729 aa39.15■■■■□ 3.86
LINC01578-201ENST00000553829 PAPPAQ13219 1627 aa39.11■■■■□ 3.85
LINC01578-201ENST00000553829 ZEB1P37275 1124 aaPredicted RBP39.1■■■■□ 3.85
LINC01578-201ENST00000553829 COL3A1P02461 1466 aaPredicted RBP39.1■■■■□ 3.85
LINC01578-201ENST00000553829 PIGBQ92521 554 aa39.09■■■■□ 3.85
LINC01578-201ENST00000553829 HSP90AB1P08238 724 aaKnown RBP39.08■■■■□ 3.85
LINC01578-201ENST00000553829 PPP2R1AP30153 589 aa39.08■■■■□ 3.85
LINC01578-201ENST00000553829 ZNF530Q6P9A1 599 aaPredicted RBP39.08■■■■□ 3.85
LINC01578-201ENST00000553829 HMOX1P09601 288 aa39.07■■■■□ 3.85
LINC01578-201ENST00000553829 DCAF5Q96JK2 942 aa39.05■■■■□ 3.84
LINC01578-201ENST00000553829 CASZ1Q86V15 1759 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 KCNQ4P56696 695 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 SMARCC1Q92922 1105 aaPredicted RBP39.04■■■■□ 3.84
LINC01578-201ENST00000553829 CFAP53Q96M91 514 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 TMOD3Q9NYL9 352 aa39.04■■■■□ 3.84
LINC01578-201ENST00000553829 CCNL1Q9UK58 526 aaPredicted RBP39.04■■■■□ 3.84
LINC01578-201ENST00000553829 ERVV-2B6SEH9 535 aa39.03■■■■□ 3.84
LINC01578-201ENST00000553829 C1orf141Q5JVX7 400 aa39.02■■■■□ 3.84
LINC01578-201ENST00000553829 PDGFDQ9GZP0 370 aaPredicted RBP39.02■■■■□ 3.84
LINC01578-201ENST00000553829 AKT1S1Q96B36 256 aa39.01■■■■□ 3.84
LINC01578-201ENST00000553829 PALLDQ8WX93 1383 aa39■■■■□ 3.83
LINC01578-201ENST00000553829 ZNF827Q17R98 1081 aa39■■■■□ 3.83
LINC01578-201ENST00000553829 U2SURPO15042 1029 aaKnown RBP38.99■■■■□ 3.83
LINC01578-201ENST00000553829 DDX10Q13206 875 aaKnown RBP38.98■■■■□ 3.83
LINC01578-201ENST00000553829 SPON1Q9HCB6 807 aa38.98■■■■□ 3.83
LINC01578-201ENST00000553829 HMGB2P26583 209 aaKnown RBP38.96■■■■□ 3.83
LINC01578-201ENST00000553829 KDM6AO15550 1401 aaPredicted RBP38.96■■■■□ 3.83
LINC01578-201ENST00000553829 QSER1Q2KHR3 1735 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 TAF1LQ8IZX4 1826 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 AKAP4Q5JQC9 854 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 ASAP1Q9ULH1 1129 aa38.94■■■■□ 3.82
LINC01578-201ENST00000553829 NUDCQ9Y266 331 aa38.93■■■■□ 3.82
LINC01578-201ENST00000553829 SCN11AQ9UI33 1791 aa38.92■■■■□ 3.82
LINC01578-201ENST00000553829 MTHFSDQ2M296 383 aaKnown RBP38.91■■■■□ 3.82
LINC01578-201ENST00000553829 ATG3Q9NT62 314 aa38.91■■■■□ 3.82
LINC01578-201ENST00000553829 C5P01031 1676 aa38.9■■■■□ 3.82
LINC01578-201ENST00000553829 CABP4P57796 275 aa38.9■■■■□ 3.82
LINC01578-201ENST00000553829 TFCP2L1Q9NZI6 479 aa38.89■■■■□ 3.82
LINC01578-201ENST00000553829 VIRMAQ69YN4 1812 aaKnown RBP38.89■■■■□ 3.82
LINC01578-201ENST00000553829 TUBGCP6Q96RT7 1819 aa38.89■■■■□ 3.82
LINC01578-201ENST00000553829 ZBTB7AO95365 584 aa38.88■■■■□ 3.81
LINC01578-201ENST00000553829 LOC102724428A0A0B4J2F2 783 aa38.87■■■■□ 3.81
LINC01578-201ENST00000553829 SIK1P57059 783 aa38.87■■■■□ 3.81
LINC01578-201ENST00000553829 NFATC2IPQ8NCF5 419 aa38.85■■■■□ 3.81
LINC01578-201ENST00000553829 MTFR1LQ9H019 292 aa38.84■■■■□ 3.81
LINC01578-201ENST00000553829 PNPLA7Q6ZV29 1317 aa38.84■■■■□ 3.81
LINC01578-201ENST00000553829 LGR6Q9HBX8 967 aa38.83■■■■□ 3.81
LINC01578-201ENST00000553829 ATF5Q9Y2D1 282 aaPredicted RBP38.83■■■■□ 3.81
LINC01578-201ENST00000553829 RALBP1Q15311 655 aa38.82■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms