RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 INSM2Q96T92 566 aaPredicted RBP13.73□□□□□ -0.21
PCNX1-205ENST00000553508 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
PCNX1-205ENST00000553508 GLMNQ92990 594 aa13.72□□□□□ -0.21
PCNX1-205ENST00000553508 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
PCNX1-205ENST00000553508 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
PCNX1-205ENST00000553508 SPINT1O43278 529 aa13.71□□□□□ -0.21
PCNX1-205ENST00000553508 MAN1A2O60476 641 aa13.71□□□□□ -0.21
PCNX1-205ENST00000553508 POLMQ9NP87 494 aaPredicted RBP13.71□□□□□ -0.21
PCNX1-205ENST00000553508 TRAK2O60296 914 aa13.7□□□□□ -0.22
PCNX1-205ENST00000553508 CTSOP43234 321 aaPredicted RBP13.7□□□□□ -0.22
PCNX1-205ENST00000553508 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PCNX1-205ENST00000553508 TTLL8A6PVC2 850 aa13.69□□□□□ -0.22
PCNX1-205ENST00000553508 USP4Q13107 963 aa13.69□□□□□ -0.22
PCNX1-205ENST00000553508 CYP2U1Q7Z449 544 aa13.69□□□□□ -0.22
PCNX1-205ENST00000553508 CHIC2Q9UKJ5 165 aa13.69□□□□□ -0.22
PCNX1-205ENST00000553508 MEN1O00255 615 aa13.68□□□□□ -0.22
PCNX1-205ENST00000553508 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
PCNX1-205ENST00000553508 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
PCNX1-205ENST00000553508 MAP7D1Q3KQU3 841 aa13.67□□□□□ -0.22
PCNX1-205ENST00000553508 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
PCNX1-205ENST00000553508 RAB6BQ9NRW1 208 aa13.67□□□□□ -0.22
PCNX1-205ENST00000553508 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
PCNX1-205ENST00000553508 ZNF775Q96BV0 537 aaPredicted RBP13.66□□□□□ -0.22
PCNX1-205ENST00000553508 UCN2Q96RP3 112 aa13.66□□□□□ -0.22
PCNX1-205ENST00000553508 ARHGEF10LQ9HCE6 1279 aa13.66□□□□□ -0.22
PCNX1-205ENST00000553508 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
PCNX1-205ENST00000553508 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
PCNX1-205ENST00000553508 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
PCNX1-205ENST00000553508 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
PCNX1-205ENST00000553508 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
PCNX1-205ENST00000553508 NCOA4Q13772 614 aa13.62□□□□□ -0.23
PCNX1-205ENST00000553508 EML3Q32P44 896 aa13.62□□□□□ -0.23
PCNX1-205ENST00000553508 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
PCNX1-205ENST00000553508 NFATC2IPQ8NCF5 419 aa13.61□□□□□ -0.23
PCNX1-205ENST00000553508 GNRH1P01148 92 aa13.6□□□□□ -0.23
PCNX1-205ENST00000553508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PCNX1-205ENST00000553508 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
PCNX1-205ENST00000553508 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
PCNX1-205ENST00000553508 RNF217Q8TC41 542 aa13.6□□□□□ -0.23
PCNX1-205ENST00000553508 TFIP11Q9UBB9 837 aaKnown RBP13.59□□□□□ -0.23
PCNX1-205ENST00000553508 ATP9BO43861 1147 aa13.58□□□□□ -0.24
PCNX1-205ENST00000553508 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
PCNX1-205ENST00000553508 NOD1Q9Y239 953 aa13.58□□□□□ -0.24
PCNX1-205ENST00000553508 VEGFBP49765 207 aa13.57□□□□□ -0.24
PCNX1-205ENST00000553508 CLN3Q13286 438 aa13.57□□□□□ -0.24
PCNX1-205ENST00000553508 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
PCNX1-205ENST00000553508 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 IL2RAP01589 272 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
PCNX1-205ENST00000553508 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
PCNX1-205ENST00000553508 ETNK1Q9HBU6 452 aa13.55□□□□□ -0.24
PCNX1-205ENST00000553508 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
PCNX1-205ENST00000553508 LZTS3O60299 673 aaPredicted RBP13.54□□□□□ -0.24
PCNX1-205ENST00000553508 GTF2IP78347 998 aa13.54□□□□□ -0.24
PCNX1-205ENST00000553508 PSME1Q06323 249 aa13.54□□□□□ -0.24
PCNX1-205ENST00000553508 LYSMD3Q7Z3D4 306 aa13.54□□□□□ -0.24
PCNX1-205ENST00000553508 NXF1Q9UBU9 619 aaKnown RBP13.54□□□□□ -0.24
PCNX1-205ENST00000553508 TERTO14746 1132 aaKnown RBP13.53□□□□□ -0.24
PCNX1-205ENST00000553508 RHOQP17081 205 aa13.53□□□□□ -0.24
PCNX1-205ENST00000553508 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
PCNX1-205ENST00000553508 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
PCNX1-205ENST00000553508 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
PCNX1-205ENST00000553508 PCDHGA11Q9Y5H2 935 aa13.53□□□□□ -0.24
PCNX1-205ENST00000553508 GDF10P55107 478 aa13.52□□□□□ -0.25
PCNX1-205ENST00000553508 CENPCQ03188 943 aa13.52□□□□□ -0.25
PCNX1-205ENST00000553508 PTSQ03393 145 aa13.52□□□□□ -0.25
PCNX1-205ENST00000553508 XAGE2Q96GT9 111 aa13.52□□□□□ -0.25
PCNX1-205ENST00000553508 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
PCNX1-205ENST00000553508 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
PCNX1-205ENST00000553508 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
PCNX1-205ENST00000553508 GPC1P35052 558 aa13.5□□□□□ -0.25
PCNX1-205ENST00000553508 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
PCNX1-205ENST00000553508 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
PCNX1-205ENST00000553508 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
PCNX1-205ENST00000553508 SCNN1DP51172 638 aa13.49□□□□□ -0.25
PCNX1-205ENST00000553508 POU4F2Q12837 409 aa13.49□□□□□ -0.25
PCNX1-205ENST00000553508 GRIP2Q9C0E4 1043 aa13.49□□□□□ -0.25
PCNX1-205ENST00000553508 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
PCNX1-205ENST00000553508 INHAP05111 366 aa13.47□□□□□ -0.25
PCNX1-205ENST00000553508 NFX1Q12986 1120 aaKnown RBP13.47□□□□□ -0.25
PCNX1-205ENST00000553508 TRIM50Q86XT4 487 aa13.47□□□□□ -0.25
PCNX1-205ENST00000553508 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.25
PCNX1-205ENST00000553508 PPFIA3O75145 1194 aa13.46□□□□□ -0.25
PCNX1-205ENST00000553508 WFS1O76024 890 aa13.46□□□□□ -0.25
PCNX1-205ENST00000553508 TLR1Q15399 786 aa13.46□□□□□ -0.25
PCNX1-205ENST00000553508 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCNX1-205ENST00000553508 HRH3Q9Y5N1 445 aa13.46□□□□□ -0.25
PCNX1-205ENST00000553508 RFX1P22670 979 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 CLDN10P78369 228 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
PCNX1-205ENST00000553508 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 OGFOD1Q8N543 542 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 SLC16A10Q8TF71 515 aa13.45□□□□□ -0.26
PCNX1-205ENST00000553508 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
PCNX1-205ENST00000553508 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
PCNX1-205ENST00000553508 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms