RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
PSEN1-206ENST00000553447 IFT57Q9NWB7 429 aa22.87■■□□□ 1.25
PSEN1-206ENST00000553447 PLEKHG2Q9H7P9 1386 aa22.87■■□□□ 1.25
PSEN1-206ENST00000553447 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
PSEN1-206ENST00000553447 GNAI1P63096 354 aa22.86■■□□□ 1.25
PSEN1-206ENST00000553447 MCM10Q7L590 875 aa22.86■■□□□ 1.25
PSEN1-206ENST00000553447 RTF1Q92541 710 aaKnown RBP22.86■■□□□ 1.25
PSEN1-206ENST00000553447 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
PSEN1-206ENST00000553447 MEGF6O75095 1541 aa22.86■■□□□ 1.25
PSEN1-206ENST00000553447 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
PSEN1-206ENST00000553447 RAPGEF4Q8WZA2 1011 aa22.85■■□□□ 1.25
PSEN1-206ENST00000553447 CRB1P82279 1406 aa22.84■■□□□ 1.25
PSEN1-206ENST00000553447 TOM1L2Q6ZVM7 507 aa22.84■■□□□ 1.25
PSEN1-206ENST00000553447 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
PSEN1-206ENST00000553447 JCADQ9P266 1359 aa22.84■■□□□ 1.25
PSEN1-206ENST00000553447 TATP17735 454 aaPredicted RBP22.83■■□□□ 1.25
PSEN1-206ENST00000553447 EVA1CP58658 441 aa22.83■■□□□ 1.25
PSEN1-206ENST00000553447 FKBP8Q14318 412 aa22.83■■□□□ 1.25
PSEN1-206ENST00000553447 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
PSEN1-206ENST00000553447 BTG4Q9NY30 223 aa22.83■■□□□ 1.25
PSEN1-206ENST00000553447 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
PSEN1-206ENST00000553447 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
PSEN1-206ENST00000553447 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
PSEN1-206ENST00000553447 CARD10Q9BWT7 1032 aa22.82■■□□□ 1.24
PSEN1-206ENST00000553447 STRN4Q9NRL3 753 aa22.82■■□□□ 1.24
PSEN1-206ENST00000553447 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
PSEN1-206ENST00000553447 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
PSEN1-206ENST00000553447 LARP1Q6PKG0 1096 aaKnown RBP22.81■■□□□ 1.24
PSEN1-206ENST00000553447 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
PSEN1-206ENST00000553447 EXOSC9Q06265 439 aaKnown RBP22.8■■□□□ 1.24
PSEN1-206ENST00000553447 MBIPQ9NS73 344 aa22.8■■□□□ 1.24
PSEN1-206ENST00000553447 NUTM2BA6NNL0 878 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-206ENST00000553447 NUTM2EB1AL46 878 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-206ENST00000553447 ADAMTS2O95450 1211 aa22.79■■□□□ 1.24
PSEN1-206ENST00000553447 CT47B1P0C2W7 299 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-206ENST00000553447 NUTM2AQ8IVF1 878 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-206ENST00000553447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.246e-6■□□□□ 8.9
PSEN1-206ENST00000553447 WNK3Q9BYP7 1800 aa22.79■■□□□ 1.24
PSEN1-206ENST00000553447 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
PSEN1-206ENST00000553447 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
PSEN1-206ENST00000553447 IL17REQ8NFR9 667 aa22.78■■□□□ 1.24
PSEN1-206ENST00000553447 SCN11AQ9UI33 1791 aa22.78■■□□□ 1.24
PSEN1-206ENST00000553447 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
PSEN1-206ENST00000553447 CHL1O00533 1208 aa22.77■■□□□ 1.24
PSEN1-206ENST00000553447 IRX6P78412 446 aaPredicted RBP22.77■■□□□ 1.24
PSEN1-206ENST00000553447 SPG7Q9UQ90 795 aa22.77■■□□□ 1.24
PSEN1-206ENST00000553447 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.23
PSEN1-206ENST00000553447 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
PSEN1-206ENST00000553447 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
PSEN1-206ENST00000553447 SLIT2O94813 1529 aa22.73■■□□□ 1.23
PSEN1-206ENST00000553447 IL2RBP14784 551 aa22.73■■□□□ 1.23
PSEN1-206ENST00000553447 HSPA1LP34931 641 aa22.73■■□□□ 1.23
PSEN1-206ENST00000553447 RARSP54136 660 aaKnown RBP22.73■■□□□ 1.23
PSEN1-206ENST00000553447 SPATA31A6Q5VVP1 1343 aa22.73■■□□□ 1.23
PSEN1-206ENST00000553447 LGR6Q9HBX8 967 aa22.72■■□□□ 1.23
PSEN1-206ENST00000553447 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
PSEN1-206ENST00000553447 BCAR3O75815 825 aa22.71■■□□□ 1.23
PSEN1-206ENST00000553447 PHKG2P15735 406 aa22.71■■□□□ 1.23
PSEN1-206ENST00000553447 MPRIPQ6WCQ1 1025 aa22.71■■□□□ 1.23
PSEN1-206ENST00000553447 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
PSEN1-206ENST00000553447 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
PSEN1-206ENST00000553447 TAF7Q15545 349 aaPredicted RBP22.7■■□□□ 1.22
PSEN1-206ENST00000553447 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.22
PSEN1-206ENST00000553447 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
PSEN1-206ENST00000553447 TSPYL4Q9UJ04 414 aa22.7■■□□□ 1.22
PSEN1-206ENST00000553447 LRP6O75581 1613 aa22.7■■□□□ 1.22
PSEN1-206ENST00000553447 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
PSEN1-206ENST00000553447 PLIN1O60240 522 aa22.69■■□□□ 1.22
PSEN1-206ENST00000553447 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-206ENST00000553447 ZCRB1Q8TBF4 217 aaKnown RBP22.68■■□□□ 1.22
PSEN1-206ENST00000553447 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
PSEN1-206ENST00000553447 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
PSEN1-206ENST00000553447 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 CYP27B1O15528 508 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 VAMP4O75379 141 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 C8orf58Q8NAV2 365 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
PSEN1-206ENST00000553447 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.66■■□□□ 1.22
PSEN1-206ENST00000553447 TEFQ10587 303 aa22.66■■□□□ 1.22
PSEN1-206ENST00000553447 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-206ENST00000553447 MRC1P22897 1456 aa22.66■■□□□ 1.22
PSEN1-206ENST00000553447 HSP90AB1P08238 724 aaKnown RBP22.65■■□□□ 1.22
PSEN1-206ENST00000553447 ALDH1L2Q3SY69 923 aa22.65■■□□□ 1.22
PSEN1-206ENST00000553447 SSH1Q8WYL5 1049 aa22.64■■□□□ 1.21
PSEN1-206ENST00000553447 BCL2L13Q9BXK5 485 aa22.64■■□□□ 1.21
PSEN1-206ENST00000553447 SPATA31A1Q5TZJ5 1347 aa22.63■■□□□ 1.21
PSEN1-206ENST00000553447 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-206ENST00000553447 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
PSEN1-206ENST00000553447 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
PSEN1-206ENST00000553447 SMC4Q9NTJ3 1288 aa22.63■■□□□ 1.21
PSEN1-206ENST00000553447 KRT24Q2M2I5 525 aa22.62■■□□□ 1.21
PSEN1-206ENST00000553447 NGLY1Q96IV0 654 aa22.62■■□□□ 1.21
PSEN1-206ENST00000553447 SPATA31A5Q5VU36 1347 aa22.61■■□□□ 1.21
PSEN1-206ENST00000553447 SPATA31A7Q8IWB4 1347 aa22.61■■□□□ 1.21
PSEN1-206ENST00000553447 BCL9LQ86UU0 1499 aa22.61■■□□□ 1.21
PSEN1-206ENST00000553447 UNC5CLQ8IV45 518 aa22.61■■□□□ 1.21
PSEN1-206ENST00000553447 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
PSEN1-206ENST00000553447 BTBD11A6QL63 1104 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms