RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 MYOM1P52179 1685 aa13.12□□□□□ -0.31
CHD8-203ENST00000553283 USP47Q96K76 1375 aa13.11□□□□□ -0.31
CHD8-203ENST00000553283 KCNQ4P56696 695 aa13.11□□□□□ -0.31
CHD8-203ENST00000553283 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
CHD8-203ENST00000553283 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
CHD8-203ENST00000553283 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
CHD8-203ENST00000553283 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
CHD8-203ENST00000553283 PNPLA7Q6ZV29 1317 aa13.1□□□□□ -0.31
CHD8-203ENST00000553283 NSD2O96028 1365 aa13.09□□□□□ -0.31
CHD8-203ENST00000553283 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
CHD8-203ENST00000553283 MEGF6O75095 1541 aa13.09□□□□□ -0.31
CHD8-203ENST00000553283 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
CHD8-203ENST00000553283 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
CHD8-203ENST00000553283 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
CHD8-203ENST00000553283 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
CHD8-203ENST00000553283 POLD1P28340 1107 aa13.08□□□□□ -0.32
CHD8-203ENST00000553283 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
CHD8-203ENST00000553283 INSRP06213 1382 aa13.07□□□□□ -0.32
CHD8-203ENST00000553283 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
CHD8-203ENST00000553283 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
CHD8-203ENST00000553283 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
CHD8-203ENST00000553283 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
CHD8-203ENST00000553283 FLT4P35916 1363 aa13.06□□□□□ -0.32
CHD8-203ENST00000553283 GPR162Q16538 588 aa13.05□□□□□ -0.32
CHD8-203ENST00000553283 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
CHD8-203ENST00000553283 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
CHD8-203ENST00000553283 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
CHD8-203ENST00000553283 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
CHD8-203ENST00000553283 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
CHD8-203ENST00000553283 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
CHD8-203ENST00000553283 RGPD2P0DJD1 1756 aa13.03□□□□□ -0.32
CHD8-203ENST00000553283 CYP27B1O15528 508 aa13.03□□□□□ -0.32
CHD8-203ENST00000553283 MSH5O43196 834 aa13.03□□□□□ -0.32
CHD8-203ENST00000553283 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
CHD8-203ENST00000553283 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
CHD8-203ENST00000553283 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
CHD8-203ENST00000553283 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
CHD8-203ENST00000553283 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
CHD8-203ENST00000553283 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
CHD8-203ENST00000553283 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
CHD8-203ENST00000553283 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
CHD8-203ENST00000553283 LY75O60449 1722 aa13□□□□□ -0.33
CHD8-203ENST00000553283 PALLDQ8WX93 1383 aa13□□□□□ -0.33
CHD8-203ENST00000553283 WASHC2AQ641Q2 1341 aa13□□□□□ -0.33
CHD8-203ENST00000553283 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
CHD8-203ENST00000553283 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CHD8-203ENST00000553283 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
CHD8-203ENST00000553283 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
CHD8-203ENST00000553283 PIGBQ92521 554 aa12.99□□□□□ -0.33
CHD8-203ENST00000553283 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
CHD8-203ENST00000553283 UTRNP46939 3433 aa12.99□□□□□ -0.33
CHD8-203ENST00000553283 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
CHD8-203ENST00000553283 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
CHD8-203ENST00000553283 EYA1Q99502 592 aa12.98□□□□□ -0.33
CHD8-203ENST00000553283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHD8-203ENST00000553283 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
CHD8-203ENST00000553283 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
CHD8-203ENST00000553283 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
CHD8-203ENST00000553283 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
CHD8-203ENST00000553283 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
CHD8-203ENST00000553283 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.33
CHD8-203ENST00000553283 CHD4Q14839 1912 aa12.96□□□□□ -0.34
CHD8-203ENST00000553283 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
CHD8-203ENST00000553283 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHD8-203ENST00000553283 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
CHD8-203ENST00000553283 AK7Q96M32 723 aa12.95□□□□□ -0.34
CHD8-203ENST00000553283 POLR3GLQ9BT43 218 aa12.95□□□□□ -0.34
CHD8-203ENST00000553283 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
CHD8-203ENST00000553283 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 PHKG2P15735 406 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 SIK1P57059 783 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
CHD8-203ENST00000553283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
CHD8-203ENST00000553283 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
CHD8-203ENST00000553283 EIF4A2Q14240 407 aaKnown RBP12.93□□□□□ -0.34
CHD8-203ENST00000553283 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
CHD8-203ENST00000553283 PHF14O94880 888 aa12.92□□□□□ -0.34
CHD8-203ENST00000553283 SSFA2P28290 1259 aa12.92□□□□□ -0.34
CHD8-203ENST00000553283 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
CHD8-203ENST00000553283 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
CHD8-203ENST00000553283 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHD8-203ENST00000553283 ITPK1Q13572 414 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 PANK3Q9H999 370 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 ATG3Q9NT62 314 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 C5P01031 1676 aa12.91□□□□□ -0.34
CHD8-203ENST00000553283 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
CHD8-203ENST00000553283 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
CHD8-203ENST00000553283 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
CHD8-203ENST00000553283 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
CHD8-203ENST00000553283 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
CHD8-203ENST00000553283 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
CHD8-203ENST00000553283 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
CHD8-203ENST00000553283 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
CHD8-203ENST00000553283 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
CHD8-203ENST00000553283 GNPATO15228 680 aa12.89□□□□□ -0.35
CHD8-203ENST00000553283 ITGB4P16144 1822 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms