RNA–Protein interactions for RNA: ENST00000552728.5

WDR90-223, Transcript of WD repeat domain 90, human

TSL 5

Gene WDR90, Length 3,133 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR90-223	ENST00000552728	ARHGEF40	Q8TER5	1519 aa		18.64	■□□□□ 0.57
WDR90-223	ENST00000552728	PRIM1	P49642	420 aa	Known RBP	18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	KIAA1211	Q6ZU35	1233 aa		18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	RNF214	Q8ND24	703 aa		18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	EXOC6B	Q9Y2D4	811 aa		18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	SLC4A2	P04920	1241 aa		18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	NUDT16	Q96DE0	195 aa	Known RBP	18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	G2E3	Q7L622	706 aa		18.63	■□□□□ 0.57
WDR90-223	ENST00000552728	FOXO3	O43524	673 aa		18.62	■□□□□ 0.57
WDR90-223	ENST00000552728	LMOD3	Q0VAK6	560 aa		18.62	■□□□□ 0.57
WDR90-223	ENST00000552728	CCDC173	Q0VFZ6	552 aa		18.62	■□□□□ 0.57
WDR90-223	ENST00000552728	MPND	Q8N594	471 aa		18.62	■□□□□ 0.57
WDR90-223	ENST00000552728	MAP2	P11137	1827 aa	Known RBP	18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	WASL	O00401	505 aa	Predicted RBP	18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	MSN	P26038	577 aa	Known RBP	18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	ARID3A	Q99856	593 aa		18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	PLEKHG5	O94827	1062 aa		18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	NEK4	P51957	841 aa		18.61	■□□□□ 0.57
WDR90-223	ENST00000552728	NUCB2	P80303	420 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	GPT2	Q8TD30	523 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	ZDHHC9	Q9Y397	364 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	ST18	O60284	1047 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	RBM10	P98175	930 aa	Known RBP	18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	PLPPR3	Q6T4P5	718 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	SYCE3	A1L190	88 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	EIF4A2	Q14240	407 aa	Known RBP	18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	HSP90AB2P	Q58FF8	381 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	CASC1	Q6TDU7	716 aa		18.6	■□□□□ 0.57
WDR90-223	ENST00000552728	DTNB	O60941	627 aa		18.59	■□□□□ 0.57
WDR90-223	ENST00000552728	PTMS	P20962	102 aa		18.59	■□□□□ 0.57
WDR90-223	ENST00000552728	ZSCAN30	Q86W11	494 aa		18.59	■□□□□ 0.57
WDR90-223	ENST00000552728	XPC	Q01831	940 aa	Predicted RBP	18.58	■□□□□ 0.56
WDR90-223	ENST00000552728	ALK	Q9UM73	1620 aa		18.58	■□□□□ 0.56
WDR90-223	ENST00000552728	RILPL2	Q969X0	211 aa		18.58	■□□□□ 0.56
WDR90-223	ENST00000552728	GDPD2	Q9HCC8	539 aa		18.58	■□□□□ 0.56
WDR90-223	ENST00000552728	KNDC1	Q76NI1	1749 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	RIMBP3C	A6NJZ7	1639 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	RIMBP3B	A6NNM3	1639 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	RIMBP3	Q9UFD9	1639 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	ATP10D	Q9P241	1426 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	RTL1	A6NKG5	1358 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	TMEM63C	Q9P1W3	806 aa		18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.57	■□□□□ 0.56
WDR90-223	ENST00000552728	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	PPP1R9B	Q96SB3	815 aa		18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	TRIM6-TRIM34	B2RNG4	842 aa		18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	UPF3B	Q9BZI7	483 aa	Known RBP	18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	DIP2C	Q9Y2E4	1556 aa		18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	CYP2E1	P05181	493 aa	Predicted RBP	18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	PALD1	Q9ULE6	856 aa		18.56	■□□□□ 0.56
WDR90-223	ENST00000552728	ERC2	O15083	957 aa		18.55	■□□□□ 0.56
WDR90-223	ENST00000552728	CCDC61	Q9Y6R9	512 aa		18.55	■□□□□ 0.56
WDR90-223	ENST00000552728	REC8	O95072	547 aa		18.55	■□□□□ 0.56
WDR90-223	ENST00000552728	ANO2	Q9NQ90	1003 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	ANKRD26	Q9UPS8	1709 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	CPS1	P31327	1500 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	PDE1A	P54750	535 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	TSPOAP1	O95153	1857 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	TMX3	Q96JJ7	454 aa		18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	LARP6	Q9BRS8	491 aa	Known RBP	18.54	■□□□□ 0.56
WDR90-223	ENST00000552728	MET	P08581	1390 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	ARHGAP31	Q2M1Z3	1444 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	TMEM131L	A2VDJ0	1609 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	CHL1	O00533	1208 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	RRP9	O43818	475 aa	Known RBP	18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	ZNF445	P59923	1031 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	GLIPR1L2	Q4G1C9	344 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	CLEC17A	Q6ZS10	378 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	TSPYL4	Q9UJ04	414 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	KIF20B	Q96Q89	1820 aa		18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	MAP4K4	O95819	1239 aa	Predicted RBP	18.53	■□□□□ 0.56
WDR90-223	ENST00000552728	RGS12	O14924	1447 aa		18.52	■□□□□ 0.56
WDR90-223	ENST00000552728	EDC4	Q6P2E9	1401 aa	Known RBP	18.52	■□□□□ 0.55
WDR90-223	ENST00000552728	PRR36	Q9H6K5	1346 aa		18.52	■□□□□ 0.55
WDR90-223	ENST00000552728	IL1RAPL2	Q9NP60	686 aa		18.51	■□□□□ 0.55
WDR90-223	ENST00000552728	FAM13B	Q9NYF5	915 aa		18.5	■□□□□ 0.55
WDR90-223	ENST00000552728	CDC42BPG	Q6DT37	1551 aa		18.5	■□□□□ 0.55
WDR90-223	ENST00000552728	DLG5	Q8TDM6	1919 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	PNMA6E	A0A0J9YXQ4	647 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	HMMR	O75330	724 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	CWC22	Q9HCG8	908 aa	Known RBP	18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	UNC5CL	Q8IV45	518 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	ATP7B	P35670	1465 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	FKBP5	Q13451	457 aa	Predicted RBP	18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	ZMYND15	Q9H091	742 aa		18.49	■□□□□ 0.55
WDR90-223	ENST00000552728	RTF1	Q92541	710 aa	Known RBP	18.48	■□□□□ 0.55
WDR90-223	ENST00000552728	CPSF1	Q10570	1443 aa	Known RBP	18.48	■□□□□ 0.55
WDR90-223	ENST00000552728	OFD1	O75665	1012 aa		18.47	■□□□□ 0.55
WDR90-223	ENST00000552728	MTHFSD	Q2M296	383 aa	Known RBP	18.47	■□□□□ 0.55
WDR90-223	ENST00000552728	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.47	■□□□□ 0.55
WDR90-223	ENST00000552728	PREX1	Q8TCU6	1659 aa		18.47	■□□□□ 0.55
WDR90-223	ENST00000552728	IL25	Q9H293	177 aa		18.47	■□□□□ 0.55
WDR90-223	ENST00000552728	TRH	P20396	242 aa	Predicted RBP	18.46	■□□□□ 0.55
WDR90-223	ENST00000552728	CLTC	Q00610	1675 aa	Known RBP	18.46	■□□□□ 0.55
WDR90-223	ENST00000552728	GADD45B	O75293	160 aa	Predicted RBP	18.46	■□□□□ 0.55
WDR90-223	ENST00000552728	PTMA	P06454	111 aa	Known RBP	18.46	■□□□□ 0.55
WDR90-223	ENST00000552728	TPM2	P07951	284 aa		18.46	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms