RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 NCAPD2Q15021 1401 aa19.28■□□□□ 0.68
DDX54-210ENST00000552375 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
DDX54-210ENST00000552375 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
DDX54-210ENST00000552375 SHANK3Q9BYB0 1731 aa19.27■□□□□ 0.68
DDX54-210ENST00000552375 NSD2O96028 1365 aa19.27■□□□□ 0.68
DDX54-210ENST00000552375 PANK3Q9H999 370 aa19.26■□□□□ 0.67
DDX54-210ENST00000552375 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
DDX54-210ENST00000552375 BTAF1O14981 1849 aa19.25■□□□□ 0.67
DDX54-210ENST00000552375 TATP17735 454 aaPredicted RBP19.25■□□□□ 0.67
DDX54-210ENST00000552375 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
DDX54-210ENST00000552375 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
DDX54-210ENST00000552375 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
DDX54-210ENST00000552375 POLKQ9UBT6 870 aa19.24■□□□□ 0.67
DDX54-210ENST00000552375 PCDH11XQ9BZA7 1347 aa19.24■□□□□ 0.67
DDX54-210ENST00000552375 PCDH11YQ9BZA8 1340 aa19.24■□□□□ 0.67
DDX54-210ENST00000552375 CASZ1Q86V15 1759 aa19.23■□□□□ 0.67
DDX54-210ENST00000552375 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
DDX54-210ENST00000552375 SPON1Q9HCB6 807 aa19.22■□□□□ 0.67
DDX54-210ENST00000552375 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
DDX54-210ENST00000552375 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
DDX54-210ENST00000552375 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
DDX54-210ENST00000552375 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
DDX54-210ENST00000552375 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
DDX54-210ENST00000552375 PKD1L3Q7Z443 1732 aa19.18■□□□□ 0.66
DDX54-210ENST00000552375 LRRC4BQ9NT99 713 aa19.18■□□□□ 0.66
DDX54-210ENST00000552375 EYA1Q99502 592 aa19.17■□□□□ 0.66
DDX54-210ENST00000552375 PDGFDQ9GZP0 370 aaPredicted RBP19.17■□□□□ 0.66
DDX54-210ENST00000552375 PLEKHG2Q9H7P9 1386 aa19.17■□□□□ 0.66
DDX54-210ENST00000552375 CYP27B1O15528 508 aa19.16■□□□□ 0.66
DDX54-210ENST00000552375 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
DDX54-210ENST00000552375 ZNF827Q17R98 1081 aa19.16■□□□□ 0.66
DDX54-210ENST00000552375 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
DDX54-210ENST00000552375 ZBTB7AO95365 584 aa19.15■□□□□ 0.66
DDX54-210ENST00000552375 PPP1R1BQ9UD71 204 aaPredicted RBP19.15■□□□□ 0.66
DDX54-210ENST00000552375 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.65
DDX54-210ENST00000552375 MORC1Q86VD1 984 aa19.14■□□□□ 0.65
DDX54-210ENST00000552375 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
DDX54-210ENST00000552375 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
DDX54-210ENST00000552375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
DDX54-210ENST00000552375 SPG7Q9UQ90 795 aa19.13■□□□□ 0.65
DDX54-210ENST00000552375 IGSF1Q8N6C5 1336 aa19.13■□□□□ 0.65
DDX54-210ENST00000552375 MTFR1LQ9H019 292 aa19.12■□□□□ 0.65
DDX54-210ENST00000552375 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
DDX54-210ENST00000552375 LY75O60449 1722 aa19.11■□□□□ 0.65
DDX54-210ENST00000552375 PTGER2P43116 358 aa19.11■□□□□ 0.65
DDX54-210ENST00000552375 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
DDX54-210ENST00000552375 NKX1-1Q15270 411 aaPredicted RBP19.1■□□□□ 0.65
DDX54-210ENST00000552375 CCNL1Q9UK58 526 aaPredicted RBP19.1■□□□□ 0.65
DDX54-210ENST00000552375 PALLDQ8WX93 1383 aa19.09■□□□□ 0.65
DDX54-210ENST00000552375 KCNQ4P56696 695 aa19.08■□□□□ 0.64
DDX54-210ENST00000552375 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
DDX54-210ENST00000552375 PNPLA7Q6ZV29 1317 aa19.07■□□□□ 0.64
DDX54-210ENST00000552375 PHKG2P15735 406 aa19.07■□□□□ 0.64
DDX54-210ENST00000552375 CC2D1BQ5T0F9 858 aaKnown RBP19.07■□□□□ 0.64
DDX54-210ENST00000552375 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
DDX54-210ENST00000552375 SGIP1Q9BQI5 828 aa19.07■□□□□ 0.64
DDX54-210ENST00000552375 IFNL2Q8IZJ0 200 aa19.06■□□□□ 0.64
DDX54-210ENST00000552375 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
DDX54-210ENST00000552375 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
DDX54-210ENST00000552375 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
DDX54-210ENST00000552375 PIGBQ92521 554 aa19.04■□□□□ 0.64
DDX54-210ENST00000552375 SMARCC1Q92922 1105 aaPredicted RBP19.04■□□□□ 0.64
DDX54-210ENST00000552375 KDRP35968 1356 aa19.04■□□□□ 0.64
DDX54-210ENST00000552375 SLC16A10Q8TF71 515 aa19.03■□□□□ 0.64
DDX54-210ENST00000552375 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
DDX54-210ENST00000552375 AEBP1Q8IUX7 1158 aa19.02■□□□□ 0.64
DDX54-210ENST00000552375 TMOD3Q9NYL9 352 aa19.02■□□□□ 0.64
DDX54-210ENST00000552375 HMGB2P26583 209 aaKnown RBP19.01■□□□□ 0.63
DDX54-210ENST00000552375 IL13P35225 146 aa19.01■□□□□ 0.63
DDX54-210ENST00000552375 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
DDX54-210ENST00000552375 C5P01031 1676 aa19.01■□□□□ 0.63
DDX54-210ENST00000552375 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
DDX54-210ENST00000552375 PLEKHO1Q53GL0 409 aaPredicted RBP19■□□□□ 0.63
DDX54-210ENST00000552375 MAP3K5Q99683 1374 aa19■□□□□ 0.63
DDX54-210ENST00000552375 ITGB4P16144 1822 aa19■□□□□ 0.63
DDX54-210ENST00000552375 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
DDX54-210ENST00000552375 MTHFSP49914 203 aa18.99■□□□□ 0.63
DDX54-210ENST00000552375 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
DDX54-210ENST00000552375 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
DDX54-210ENST00000552375 ARXQ96QS3 562 aa18.99■□□□□ 0.63
DDX54-210ENST00000552375 FHDC1Q9C0D6 1143 aaPredicted RBP18.99■□□□□ 0.63
DDX54-210ENST00000552375 KDM6AO15550 1401 aaPredicted RBP18.99■□□□□ 0.63
DDX54-210ENST00000552375 UTRNP46939 3433 aa18.99■□□□□ 0.63
DDX54-210ENST00000552375 LOC102724428A0A0B4J2F2 783 aa18.97■□□□□ 0.63
DDX54-210ENST00000552375 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
DDX54-210ENST00000552375 SIK1P57059 783 aa18.97■□□□□ 0.63
DDX54-210ENST00000552375 DCAF5Q96JK2 942 aa18.97■□□□□ 0.63
DDX54-210ENST00000552375 POLD1P28340 1107 aa18.96■□□□□ 0.63
DDX54-210ENST00000552375 SYT17Q9BSW7 474 aa18.96■□□□□ 0.63
DDX54-210ENST00000552375 C4BP0C0L5 1744 aa18.96■□□□□ 0.63
DDX54-210ENST00000552375 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
DDX54-210ENST00000552375 COL24A1Q17RW2 1714 aa18.95■□□□□ 0.62
DDX54-210ENST00000552375 ERVV-2B6SEH9 535 aa18.95■□□□□ 0.62
DDX54-210ENST00000552375 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
DDX54-210ENST00000552375 AK7Q96M32 723 aa18.95■□□□□ 0.62
DDX54-210ENST00000552375 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
DDX54-210ENST00000552375 COL3A1P02461 1466 aaPredicted RBP18.95■□□□□ 0.62
DDX54-210ENST00000552375 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
DDX54-210ENST00000552375 C1orf141Q5JVX7 400 aa18.94■□□□□ 0.62
DDX54-210ENST00000552375 FLAD1Q8NFF5 587 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms