RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CD2APQ9Y5K6 639 aa21.79■■□□□ 1.08
BRF1-220ENST00000552127 ERBB3P21860 1342 aa21.79■■□□□ 1.08
BRF1-220ENST00000552127 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
BRF1-220ENST00000552127 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
BRF1-220ENST00000552127 DDX54Q8TDD1 881 aaKnown RBP21.74■■□□□ 1.07
BRF1-220ENST00000552127 ZNF692Q9BU19 519 aaPredicted RBP21.74■■□□□ 1.07
BRF1-220ENST00000552127 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
BRF1-220ENST00000552127 CD163L1Q9NR16 1453 aa21.74■■□□□ 1.07
BRF1-220ENST00000552127 KTN1Q86UP2 1357 aaKnown RBP21.74■■□□□ 1.07
BRF1-220ENST00000552127 TTC21AQ8NDW8 1320 aa21.73■■□□□ 1.07
BRF1-220ENST00000552127 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
BRF1-220ENST00000552127 PRIM1P49642 420 aaKnown RBP21.72■■□□□ 1.07
BRF1-220ENST00000552127 CCNL1Q9UK58 526 aaPredicted RBP21.72■■□□□ 1.07
BRF1-220ENST00000552127 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
BRF1-220ENST00000552127 LTN1O94822 1766 aa21.71■■□□□ 1.07
BRF1-220ENST00000552127 TOMM70O94826 608 aa21.71■■□□□ 1.07
BRF1-220ENST00000552127 WDR90Q96KV7 1748 aa21.71■■□□□ 1.07
BRF1-220ENST00000552127 NSD2O96028 1365 aa21.71■■□□□ 1.07
BRF1-220ENST00000552127 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
BRF1-220ENST00000552127 PCNTO95613 3336 aa21.7■■□□□ 1.06
BRF1-220ENST00000552127 PRELPP51888 382 aa21.7■■□□□ 1.06
BRF1-220ENST00000552127 ANKRD24Q8TF21 1146 aa21.7■■□□□ 1.06
BRF1-220ENST00000552127 USP47Q96K76 1375 aa21.7■■□□□ 1.06
BRF1-220ENST00000552127 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
BRF1-220ENST00000552127 TESK2Q96S53 571 aa21.69■■□□□ 1.06
BRF1-220ENST00000552127 IGSF1Q8N6C5 1336 aa21.69■■□□□ 1.06
BRF1-220ENST00000552127 TNS4Q8IZW8 715 aa21.68■■□□□ 1.06
BRF1-220ENST00000552127 TIMELESSQ9UNS1 1208 aa21.68■■□□□ 1.06
BRF1-220ENST00000552127 PUS7Q96PZ0 661 aaKnown RBP21.67■■□□□ 1.06
BRF1-220ENST00000552127 TMC1Q8TDI8 760 aa21.66■■□□□ 1.06
BRF1-220ENST00000552127 EDC4Q6P2E9 1401 aaKnown RBP21.65■■□□□ 1.06
BRF1-220ENST00000552127 A0A1W2PP64 1363 aa21.65■■□□□ 1.06
BRF1-220ENST00000552127 JMYQ8N9B5 988 aa21.65■■□□□ 1.06
BRF1-220ENST00000552127 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
BRF1-220ENST00000552127 C5P01031 1676 aa21.65■■□□□ 1.06
BRF1-220ENST00000552127 SLC24A1O60721 1099 aa21.64■■□□□ 1.05
BRF1-220ENST00000552127 HTRA3P83110 453 aa21.64■■□□□ 1.05
BRF1-220ENST00000552127 HDGFL2Q7Z4V5 671 aaPredicted RBP21.64■■□□□ 1.05
BRF1-220ENST00000552127 SLC12A5Q9H2X9 1139 aa21.63■■□□□ 1.05
BRF1-220ENST00000552127 USP31Q70CQ4 1352 aa21.62■■□□□ 1.05
BRF1-220ENST00000552127 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
BRF1-220ENST00000552127 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
BRF1-220ENST00000552127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
BRF1-220ENST00000552127 FLAD1Q8NFF5 587 aa21.61■■□□□ 1.05
BRF1-220ENST00000552127 KIF20BQ96Q89 1820 aa21.6■■□□□ 1.05
BRF1-220ENST00000552127 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
BRF1-220ENST00000552127 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
BRF1-220ENST00000552127 NME9Q86XW9 330 aa21.58■■□□□ 1.05
BRF1-220ENST00000552127 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.05
BRF1-220ENST00000552127 FAM208AQ9UK61 1670 aaKnown RBP21.58■■□□□ 1.05
BRF1-220ENST00000552127 TMF1P82094 1093 aa21.57■■□□□ 1.04
BRF1-220ENST00000552127 RBM46Q8TBY0 533 aaKnown RBP21.56■■□□□ 1.04
BRF1-220ENST00000552127 LTV1Q96GA3 475 aaPredicted RBP21.55■■□□□ 1.04
BRF1-220ENST00000552127 ZCRB1Q8TBF4 217 aaKnown RBP21.54■■□□□ 1.04
BRF1-220ENST00000552127 TOGARAM1Q9Y4F4 1720 aa21.54■■□□□ 1.04
BRF1-220ENST00000552127 AMIGO3Q86WK7 504 aa21.53■■□□□ 1.04
BRF1-220ENST00000552127 C4BP0C0L5 1744 aa21.52■■□□□ 1.04
BRF1-220ENST00000552127 IP6K1Q92551 441 aa21.52■■□□□ 1.04
BRF1-220ENST00000552127 SMIM5Q71RC9 77 aa21.51■■□□□ 1.03
BRF1-220ENST00000552127 C16orf71Q8IYS4 520 aaPredicted RBP21.51■■□□□ 1.03
BRF1-220ENST00000552127 UBR3Q6ZT12 1888 aa21.51■■□□□ 1.03
BRF1-220ENST00000552127 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
BRF1-220ENST00000552127 MEGF6O75095 1541 aa21.5■■□□□ 1.03
BRF1-220ENST00000552127 PHF14O94880 888 aa21.5■■□□□ 1.03
BRF1-220ENST00000552127 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
BRF1-220ENST00000552127 FSTL1Q12841 308 aa21.5■■□□□ 1.03
BRF1-220ENST00000552127 CDCA8Q53HL2 280 aa21.5■■□□□ 1.03
BRF1-220ENST00000552127 AK7Q96M32 723 aa21.49■■□□□ 1.03
BRF1-220ENST00000552127 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
BRF1-220ENST00000552127 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
BRF1-220ENST00000552127 SLC34A2O95436 690 aa21.48■■□□□ 1.03
BRF1-220ENST00000552127 KIAA1551Q9HCM1 1747 aa21.48■■□□□ 1.03
BRF1-220ENST00000552127 PXDNLA1KZ92 1463 aa21.47■■□□□ 1.03
BRF1-220ENST00000552127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.47■■□□□ 1.03
BRF1-220ENST00000552127 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
BRF1-220ENST00000552127 KIF13BQ9NQT8 1826 aa21.46■■□□□ 1.03
BRF1-220ENST00000552127 ARHGAP27Q6ZUM4 889 aa21.46■■□□□ 1.03
BRF1-220ENST00000552127 HSPA1AP0DMV8 641 aaKnown RBP21.43■■□□□ 1.02
BRF1-220ENST00000552127 HSPA1BP0DMV9 641 aaKnown RBP21.43■■□□□ 1.02
BRF1-220ENST00000552127 COG3Q96JB2 828 aa21.43■■□□□ 1.02
BRF1-220ENST00000552127 NSD3Q9BZ95 1437 aa21.43■■□□□ 1.02
BRF1-220ENST00000552127 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
BRF1-220ENST00000552127 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
BRF1-220ENST00000552127 A0A0G2JLW4 131 aa21.41■■□□□ 1.02
BRF1-220ENST00000552127 SSFA2P28290 1259 aa21.41■■□□□ 1.02
BRF1-220ENST00000552127 KCPQ6ZWJ8 1503 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 PLEKHG2Q9H7P9 1386 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 HOXC9P31274 260 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 TGFB2P61812 414 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 PKD1L3Q7Z443 1732 aa21.4■■□□□ 1.02
BRF1-220ENST00000552127 ITGB4P16144 1822 aa21.39■■□□□ 1.02
BRF1-220ENST00000552127 MMP10P09238 476 aa21.39■■□□□ 1.01
BRF1-220ENST00000552127 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
BRF1-220ENST00000552127 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
BRF1-220ENST00000552127 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
BRF1-220ENST00000552127 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
BRF1-220ENST00000552127 BRCA1P38398 1863 aaKnown RBP21.38■■□□□ 1.01
BRF1-220ENST00000552127 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
BRF1-220ENST00000552127 FYB1O15117 783 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms