RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 RAPGEF4Q8WZA2 1011 aa13.45□□□□□ -0.26
GCN1-208ENST00000551549 PANK3Q9H999 370 aa13.45□□□□□ -0.26
GCN1-208ENST00000551549 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
GCN1-208ENST00000551549 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
GCN1-208ENST00000551549 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
GCN1-208ENST00000551549 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
GCN1-208ENST00000551549 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
GCN1-208ENST00000551549 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
GCN1-208ENST00000551549 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
GCN1-208ENST00000551549 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
GCN1-208ENST00000551549 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
GCN1-208ENST00000551549 KIF20BQ96Q89 1820 aa13.43□□□□□ -0.26
GCN1-208ENST00000551549 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
GCN1-208ENST00000551549 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
GCN1-208ENST00000551549 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
GCN1-208ENST00000551549 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
GCN1-208ENST00000551549 PPP1R1BQ9UD71 204 aaPredicted RBP13.42□□□□□ -0.26
GCN1-208ENST00000551549 NSD2O96028 1365 aa13.42□□□□□ -0.26
GCN1-208ENST00000551549 KCNQ4P56696 695 aa13.41□□□□□ -0.26
GCN1-208ENST00000551549 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
GCN1-208ENST00000551549 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
GCN1-208ENST00000551549 BTAF1O14981 1849 aa13.4□□□□□ -0.26
GCN1-208ENST00000551549 CYP27B1O15528 508 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 PTGER2P43116 358 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 EYA1Q99502 592 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
GCN1-208ENST00000551549 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
GCN1-208ENST00000551549 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
GCN1-208ENST00000551549 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
GCN1-208ENST00000551549 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
GCN1-208ENST00000551549 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
GCN1-208ENST00000551549 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
GCN1-208ENST00000551549 MORC1Q86VD1 984 aa13.36□□□□□ -0.27
GCN1-208ENST00000551549 MTFR1LQ9H019 292 aa13.36□□□□□ -0.27
GCN1-208ENST00000551549 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
GCN1-208ENST00000551549 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
GCN1-208ENST00000551549 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
GCN1-208ENST00000551549 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
GCN1-208ENST00000551549 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
GCN1-208ENST00000551549 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
GCN1-208ENST00000551549 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
GCN1-208ENST00000551549 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
GCN1-208ENST00000551549 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
GCN1-208ENST00000551549 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.28
GCN1-208ENST00000551549 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
GCN1-208ENST00000551549 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
GCN1-208ENST00000551549 PIGBQ92521 554 aa13.32□□□□□ -0.28
GCN1-208ENST00000551549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
GCN1-208ENST00000551549 PHKG2P15735 406 aa13.31□□□□□ -0.28
GCN1-208ENST00000551549 ARXQ96QS3 562 aa13.31□□□□□ -0.28
GCN1-208ENST00000551549 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
GCN1-208ENST00000551549 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
GCN1-208ENST00000551549 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
GCN1-208ENST00000551549 IFNL2Q8IZJ0 200 aa13.3□□□□□ -0.28
GCN1-208ENST00000551549 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
GCN1-208ENST00000551549 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
GCN1-208ENST00000551549 SYT17Q9BSW7 474 aa13.29□□□□□ -0.28
GCN1-208ENST00000551549 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
GCN1-208ENST00000551549 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
GCN1-208ENST00000551549 MSH5O43196 834 aa13.28□□□□□ -0.28
GCN1-208ENST00000551549 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
GCN1-208ENST00000551549 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
GCN1-208ENST00000551549 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
GCN1-208ENST00000551549 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
GCN1-208ENST00000551549 LY75O60449 1722 aa13.27□□□□□ -0.28
GCN1-208ENST00000551549 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
GCN1-208ENST00000551549 IL13P35225 146 aa13.27□□□□□ -0.29
GCN1-208ENST00000551549 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
GCN1-208ENST00000551549 POLD1P28340 1107 aa13.26□□□□□ -0.29
GCN1-208ENST00000551549 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
GCN1-208ENST00000551549 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
GCN1-208ENST00000551549 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
GCN1-208ENST00000551549 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
GCN1-208ENST00000551549 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 MTHFSP49914 203 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 SIK1P57059 783 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 CNGB1Q14028 1251 aaPredicted RBP13.25□□□□□ -0.29
GCN1-208ENST00000551549 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
GCN1-208ENST00000551549 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
GCN1-208ENST00000551549 YY1P25490 414 aa13.24□□□□□ -0.29
GCN1-208ENST00000551549 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
GCN1-208ENST00000551549 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
GCN1-208ENST00000551549 AK7Q96M32 723 aa13.24□□□□□ -0.29
GCN1-208ENST00000551549 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 ITPK1Q13572 414 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 ITGB4P16144 1822 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
GCN1-208ENST00000551549 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
GCN1-208ENST00000551549 PHF14O94880 888 aa13.22□□□□□ -0.29
GCN1-208ENST00000551549 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
GCN1-208ENST00000551549 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
GCN1-208ENST00000551549 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms