RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 NCAPD2Q15021 1401 aa23.03■■□□□ 1.28
LETMD1-230ENST00000551477 CNGB1Q14028 1251 aaPredicted RBP23.03■■□□□ 1.28
LETMD1-230ENST00000551477 CAMKK2Q96RR4 588 aa23.02■■□□□ 1.28
LETMD1-230ENST00000551477 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
LETMD1-230ENST00000551477 NHSQ6T4R5 1651 aa23.01■■□□□ 1.27
LETMD1-230ENST00000551477 MTHFSP49914 203 aa23.01■■□□□ 1.27
LETMD1-230ENST00000551477 EZH2Q15910 746 aaKnown RBP23.01■■□□□ 1.27
LETMD1-230ENST00000551477 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
LETMD1-230ENST00000551477 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
LETMD1-230ENST00000551477 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
LETMD1-230ENST00000551477 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
LETMD1-230ENST00000551477 PLSCR1O15162 318 aa22.99■■□□□ 1.27
LETMD1-230ENST00000551477 ACSBG1Q96GR2 724 aa22.99■■□□□ 1.27
LETMD1-230ENST00000551477 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
LETMD1-230ENST00000551477 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
LETMD1-230ENST00000551477 PKD1L3Q7Z443 1732 aa22.97■■□□□ 1.27
LETMD1-230ENST00000551477 KCNQ2O43526 872 aa22.96■■□□□ 1.27
LETMD1-230ENST00000551477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.27
LETMD1-230ENST00000551477 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
LETMD1-230ENST00000551477 RREB1Q92766 1687 aa22.96■■□□□ 1.27
LETMD1-230ENST00000551477 PTF1AQ7RTS3 328 aa22.95■■□□□ 1.26
LETMD1-230ENST00000551477 IL13P35225 146 aa22.94■■□□□ 1.26
LETMD1-230ENST00000551477 BTAF1O14981 1849 aa22.94■■□□□ 1.26
LETMD1-230ENST00000551477 DOT1LQ8TEK3 1739 aa22.94■■□□□ 1.26
LETMD1-230ENST00000551477 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
LETMD1-230ENST00000551477 SYTL4Q96C24 671 aaPredicted RBP22.92■■□□□ 1.26
LETMD1-230ENST00000551477 NUP188Q5SRE5 1749 aa22.91■■□□□ 1.26
LETMD1-230ENST00000551477 NBPF14Q5TI25 921 aa22.91■■□□□ 1.26
LETMD1-230ENST00000551477 CYP27B1O15528 508 aa22.9■■□□□ 1.26
LETMD1-230ENST00000551477 PRIM1P49642 420 aaKnown RBP22.9■■□□□ 1.26
LETMD1-230ENST00000551477 SULT6B1Q6IMI4 303 aa22.9■■□□□ 1.26
LETMD1-230ENST00000551477 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
LETMD1-230ENST00000551477 PLEKHO1Q53GL0 409 aaPredicted RBP22.89■■□□□ 1.25
LETMD1-230ENST00000551477 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
LETMD1-230ENST00000551477 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
LETMD1-230ENST00000551477 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
LETMD1-230ENST00000551477 KDRP35968 1356 aa22.87■■□□□ 1.25
LETMD1-230ENST00000551477 PPP2R1AP30153 589 aa22.86■■□□□ 1.25
LETMD1-230ENST00000551477 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
LETMD1-230ENST00000551477 TXNRD1Q16881 649 aa22.86■■□□□ 1.25
LETMD1-230ENST00000551477 AEBP1Q8IUX7 1158 aa22.86■■□□□ 1.25
LETMD1-230ENST00000551477 PHKG2P15735 406 aa22.84■■□□□ 1.25
LETMD1-230ENST00000551477 ITGB4P16144 1822 aa22.84■■□□□ 1.25
LETMD1-230ENST00000551477 PSDA5PKW4 1024 aaPredicted RBP22.83■■□□□ 1.25
LETMD1-230ENST00000551477 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
LETMD1-230ENST00000551477 R3HDM1Q15032 1099 aaKnown RBP22.83■■□□□ 1.25
LETMD1-230ENST00000551477 PROM2Q8N271 834 aa22.83■■□□□ 1.25
LETMD1-230ENST00000551477 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.25
LETMD1-230ENST00000551477 U2SURPO15042 1029 aaKnown RBP22.81■■□□□ 1.24
LETMD1-230ENST00000551477 HMOX1P09601 288 aa22.81■■□□□ 1.24
LETMD1-230ENST00000551477 C1orf141Q5JVX7 400 aa22.81■■□□□ 1.24
LETMD1-230ENST00000551477 ZNF530Q6P9A1 599 aaPredicted RBP22.81■■□□□ 1.24
LETMD1-230ENST00000551477 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
LETMD1-230ENST00000551477 NUDCQ9Y266 331 aa22.81■■□□□ 1.24
LETMD1-230ENST00000551477 TOGARAM1Q9Y4F4 1720 aa22.8■■□□□ 1.24
LETMD1-230ENST00000551477 SLC27A3Q5K4L6 730 aa22.8■■□□□ 1.24
LETMD1-230ENST00000551477 LY75O60449 1722 aa22.78■■□□□ 1.24
LETMD1-230ENST00000551477 RALBP1Q15311 655 aa22.78■■□□□ 1.24
LETMD1-230ENST00000551477 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
LETMD1-230ENST00000551477 STK32BQ9NY57 414 aa22.77■■□□□ 1.24
LETMD1-230ENST00000551477 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
LETMD1-230ENST00000551477 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
LETMD1-230ENST00000551477 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
LETMD1-230ENST00000551477 ERVV-2B6SEH9 535 aa22.75■■□□□ 1.23
LETMD1-230ENST00000551477 PIGBQ92521 554 aa22.74■■□□□ 1.23
LETMD1-230ENST00000551477 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
LETMD1-230ENST00000551477 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
LETMD1-230ENST00000551477 CCNL1Q9UK58 526 aaPredicted RBP22.73■■□□□ 1.23
LETMD1-230ENST00000551477 ANO8Q9HCE9 1232 aaPredicted RBP22.72■■□□□ 1.23
LETMD1-230ENST00000551477 LRRC4BQ9NT99 713 aa22.72■■□□□ 1.23
LETMD1-230ENST00000551477 PALLDQ8WX93 1383 aa22.72■■□□□ 1.23
LETMD1-230ENST00000551477 U2AF1L5P0DN76 240 aaPredicted RBP22.71■■□□□ 1.23
LETMD1-230ENST00000551477 U2AF1Q01081 240 aaKnown RBP eCLIP22.71■■□□□ 1.23
LETMD1-230ENST00000551477 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
LETMD1-230ENST00000551477 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
LETMD1-230ENST00000551477 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
LETMD1-230ENST00000551477 CABP4P57796 275 aa22.7■■□□□ 1.22
LETMD1-230ENST00000551477 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
LETMD1-230ENST00000551477 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
LETMD1-230ENST00000551477 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
LETMD1-230ENST00000551477 FCHSD2O94868 740 aa22.68■■□□□ 1.22
LETMD1-230ENST00000551477 GAS2L2Q8NHY3 880 aa22.68■■□□□ 1.22
LETMD1-230ENST00000551477 LRP5O75197 1615 aa22.68■■□□□ 1.22
LETMD1-230ENST00000551477 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
LETMD1-230ENST00000551477 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
LETMD1-230ENST00000551477 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
LETMD1-230ENST00000551477 SRCAPQ6ZRS2 3230 aa22.66■■□□□ 1.22
LETMD1-230ENST00000551477 KCNQ4P56696 695 aa22.66■■□□□ 1.22
LETMD1-230ENST00000551477 C5P01031 1676 aa22.65■■□□□ 1.22
LETMD1-230ENST00000551477 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
LETMD1-230ENST00000551477 TAF1LQ8IZX4 1826 aa22.64■■□□□ 1.22
LETMD1-230ENST00000551477 NEFMP07197 916 aa22.64■■□□□ 1.21
LETMD1-230ENST00000551477 AKT1S1Q96B36 256 aa22.64■■□□□ 1.21
LETMD1-230ENST00000551477 ATG3Q9NT62 314 aa22.64■■□□□ 1.21
LETMD1-230ENST00000551477 CASZ1Q86V15 1759 aa22.63■■□□□ 1.21
LETMD1-230ENST00000551477 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
LETMD1-230ENST00000551477 LOC102724428A0A0B4J2F2 783 aa22.63■■□□□ 1.21
LETMD1-230ENST00000551477 SIK1P57059 783 aa22.63■■□□□ 1.21
LETMD1-230ENST00000551477 ZNF827Q17R98 1081 aa22.63■■□□□ 1.21
LETMD1-230ENST00000551477 NFATC2IPQ8NCF5 419 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms