RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 IP6K1Q92551 441 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 PDGFDQ9GZP0 370 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-228ENST00000550929 AMPHP49418 695 aa12.68□□□□□ -0.38
LETMD1-228ENST00000550929 TMF1P82094 1093 aa12.68□□□□□ -0.38
LETMD1-228ENST00000550929 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
LETMD1-228ENST00000550929 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
LETMD1-228ENST00000550929 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
LETMD1-228ENST00000550929 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
LETMD1-228ENST00000550929 USP47Q96K76 1375 aa12.67□□□□□ -0.38
LETMD1-228ENST00000550929 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
LETMD1-228ENST00000550929 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
LETMD1-228ENST00000550929 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
LETMD1-228ENST00000550929 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
LETMD1-228ENST00000550929 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
LETMD1-228ENST00000550929 HOXC9P31274 260 aa12.66□□□□□ -0.38
LETMD1-228ENST00000550929 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
LETMD1-228ENST00000550929 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
LETMD1-228ENST00000550929 BCL9O00512 1426 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 ABCC6O95255 1503 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 FYB1O15117 783 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 STK32BQ9NY57 414 aa12.65□□□□□ -0.38
LETMD1-228ENST00000550929 LTN1O94822 1766 aa12.64□□□□□ -0.39
LETMD1-228ENST00000550929 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
LETMD1-228ENST00000550929 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
LETMD1-228ENST00000550929 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
LETMD1-228ENST00000550929 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
LETMD1-228ENST00000550929 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
LETMD1-228ENST00000550929 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
LETMD1-228ENST00000550929 SYTL4Q96C24 671 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-228ENST00000550929 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
LETMD1-228ENST00000550929 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
LETMD1-228ENST00000550929 KCNQ4P56696 695 aa12.6□□□□□ -0.39
LETMD1-228ENST00000550929 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
LETMD1-228ENST00000550929 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
LETMD1-228ENST00000550929 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
LETMD1-228ENST00000550929 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
LETMD1-228ENST00000550929 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
LETMD1-228ENST00000550929 ZNF827Q17R98 1081 aa12.58□□□□□ -0.4
LETMD1-228ENST00000550929 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
LETMD1-228ENST00000550929 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
LETMD1-228ENST00000550929 PTGER2P43116 358 aa12.57□□□□□ -0.4
LETMD1-228ENST00000550929 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
LETMD1-228ENST00000550929 MEGF6O75095 1541 aa12.57□□□□□ -0.4
LETMD1-228ENST00000550929 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LETMD1-228ENST00000550929 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
LETMD1-228ENST00000550929 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
LETMD1-228ENST00000550929 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
LETMD1-228ENST00000550929 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
LETMD1-228ENST00000550929 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
LETMD1-228ENST00000550929 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-228ENST00000550929 YY1P25490 414 aa12.55□□□□□ -0.4
LETMD1-228ENST00000550929 MTFR1LQ9H019 292 aa12.55□□□□□ -0.4
LETMD1-228ENST00000550929 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
LETMD1-228ENST00000550929 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
LETMD1-228ENST00000550929 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
LETMD1-228ENST00000550929 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-228ENST00000550929 INSRP06213 1382 aa12.54□□□□□ -0.4
LETMD1-228ENST00000550929 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
LETMD1-228ENST00000550929 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
LETMD1-228ENST00000550929 BTAF1O14981 1849 aa12.54□□□□□ -0.4
LETMD1-228ENST00000550929 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-228ENST00000550929 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-228ENST00000550929 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.4
LETMD1-228ENST00000550929 NSD2O96028 1365 aa12.52□□□□□ -0.41
LETMD1-228ENST00000550929 FLT4P35916 1363 aa12.52□□□□□ -0.41
LETMD1-228ENST00000550929 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
LETMD1-228ENST00000550929 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
LETMD1-228ENST00000550929 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
LETMD1-228ENST00000550929 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
LETMD1-228ENST00000550929 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
LETMD1-228ENST00000550929 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
LETMD1-228ENST00000550929 ARXQ96QS3 562 aa12.51□□□□□ -0.41
LETMD1-228ENST00000550929 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
LETMD1-228ENST00000550929 CCNL1Q9UK58 526 aaPredicted RBP12.51□□□□□ -0.41
LETMD1-228ENST00000550929 MYOM1P52179 1685 aa12.51□□□□□ -0.41
LETMD1-228ENST00000550929 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
LETMD1-228ENST00000550929 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 CYP27B1O15528 508 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
LETMD1-228ENST00000550929 EYA1Q99502 592 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-228ENST00000550929 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
LETMD1-228ENST00000550929 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
LETMD1-228ENST00000550929 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
LETMD1-228ENST00000550929 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
LETMD1-228ENST00000550929 PANK3Q9H999 370 aa12.47□□□□□ -0.41
LETMD1-228ENST00000550929 KIF24Q5T7B8 1368 aa12.47□□□□□ -0.41
LETMD1-228ENST00000550929 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
LETMD1-228ENST00000550929 POLD1P28340 1107 aa12.45□□□□□ -0.42
LETMD1-228ENST00000550929 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
LETMD1-228ENST00000550929 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
LETMD1-228ENST00000550929 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms