RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
BRF1-218ENST00000550692 KAT6BQ8WYB5 2073 aa15.34■□□□□ 0.05
BRF1-218ENST00000550692 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
BRF1-218ENST00000550692 TATP17735 454 aaPredicted RBP15.34■□□□□ 0.05
BRF1-218ENST00000550692 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
BRF1-218ENST00000550692 CC2D1BQ5T0F9 858 aaKnown RBP15.34■□□□□ 0.05
BRF1-218ENST00000550692 PLSCR1O15162 318 aa15.33■□□□□ 0.04
BRF1-218ENST00000550692 SHANK3Q9BYB0 1731 aa15.33■□□□□ 0.04
BRF1-218ENST00000550692 CNGB1Q14028 1251 aaPredicted RBP15.32■□□□□ 0.04
BRF1-218ENST00000550692 NCAPD2Q15021 1401 aa15.32■□□□□ 0.04
BRF1-218ENST00000550692 RREB1Q92766 1687 aa15.32■□□□□ 0.04
BRF1-218ENST00000550692 PROM2Q8N271 834 aa15.31■□□□□ 0.04
BRF1-218ENST00000550692 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
BRF1-218ENST00000550692 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
BRF1-218ENST00000550692 R3HDM1Q15032 1099 aaKnown RBP15.3■□□□□ 0.04
BRF1-218ENST00000550692 NUP188Q5SRE5 1749 aa15.29■□□□□ 0.04
BRF1-218ENST00000550692 MTHFSP49914 203 aa15.29■□□□□ 0.04
BRF1-218ENST00000550692 NPC1L1Q9UHC9 1359 aa15.28■□□□□ 0.04
BRF1-218ENST00000550692 IGSF1Q8N6C5 1336 aa15.28■□□□□ 0.04
BRF1-218ENST00000550692 CYP27B1O15528 508 aa15.28■□□□□ 0.04
BRF1-218ENST00000550692 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
BRF1-218ENST00000550692 TXNRD1Q16881 649 aa15.28■□□□□ 0.04
BRF1-218ENST00000550692 SYTL4Q96C24 671 aaPredicted RBP15.28■□□□□ 0.04
BRF1-218ENST00000550692 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
BRF1-218ENST00000550692 RGPD4Q7Z3J3 1758 aa15.28■□□□□ 0.04
BRF1-218ENST00000550692 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
BRF1-218ENST00000550692 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
BRF1-218ENST00000550692 NBPF14Q5TI25 921 aa15.27■□□□□ 0.04
BRF1-218ENST00000550692 BTAF1O14981 1849 aa15.27■□□□□ 0.03
BRF1-218ENST00000550692 IL13P35225 146 aa15.26■□□□□ 0.03
BRF1-218ENST00000550692 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
BRF1-218ENST00000550692 DOT1LQ8TEK3 1739 aa15.26■□□□□ 0.03
BRF1-218ENST00000550692 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
BRF1-218ENST00000550692 ANO8Q9HCE9 1232 aaPredicted RBP15.25■□□□□ 0.03
BRF1-218ENST00000550692 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
BRF1-218ENST00000550692 LRP5O75197 1615 aa15.25■□□□□ 0.03
BRF1-218ENST00000550692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.03
BRF1-218ENST00000550692 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
BRF1-218ENST00000550692 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
BRF1-218ENST00000550692 PHKG2P15735 406 aa15.21■□□□□ 0.03
BRF1-218ENST00000550692 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
BRF1-218ENST00000550692 LRRC4BQ9NT99 713 aa15.21■□□□□ 0.03
BRF1-218ENST00000550692 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
BRF1-218ENST00000550692 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
BRF1-218ENST00000550692 MPRIPQ6WCQ1 1025 aa15.2■□□□□ 0.02
BRF1-218ENST00000550692 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
BRF1-218ENST00000550692 KCNQ4P56696 695 aa15.19■□□□□ 0.02
BRF1-218ENST00000550692 KDRP35968 1356 aa15.19■□□□□ 0.02
BRF1-218ENST00000550692 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
BRF1-218ENST00000550692 HMOX1P09601 288 aa15.18■□□□□ 0.02
BRF1-218ENST00000550692 SLC15A2Q16348 729 aa15.18■□□□□ 0.02
BRF1-218ENST00000550692 STK32BQ9NY57 414 aa15.18■□□□□ 0.02
BRF1-218ENST00000550692 ITGB4P16144 1822 aa15.17■□□□□ 0.02
BRF1-218ENST00000550692 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
BRF1-218ENST00000550692 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
BRF1-218ENST00000550692 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
BRF1-218ENST00000550692 PIGBQ92521 554 aa15.17■□□□□ 0.02
BRF1-218ENST00000550692 PDGFDQ9GZP0 370 aaPredicted RBP15.17■□□□□ 0.02
BRF1-218ENST00000550692 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
BRF1-218ENST00000550692 SLC27A3Q5K4L6 730 aa15.16■□□□□ 0.02
BRF1-218ENST00000550692 LY75O60449 1722 aa15.16■□□□□ 0.02
BRF1-218ENST00000550692 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
BRF1-218ENST00000550692 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
BRF1-218ENST00000550692 ZNF827Q17R98 1081 aa15.15■□□□□ 0.02
BRF1-218ENST00000550692 CCNL1Q9UK58 526 aaPredicted RBP15.15■□□□□ 0.02
BRF1-218ENST00000550692 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
BRF1-218ENST00000550692 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
BRF1-218ENST00000550692 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
BRF1-218ENST00000550692 HSP90AB1P08238 724 aaKnown RBP15.13■□□□□ 0.01
BRF1-218ENST00000550692 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
BRF1-218ENST00000550692 DCAF5Q96JK2 942 aa15.13■□□□□ 0.01
BRF1-218ENST00000550692 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
BRF1-218ENST00000550692 KDM6AO15550 1401 aaPredicted RBP15.12■□□□□ 0.01
BRF1-218ENST00000550692 CASZ1Q86V15 1759 aa15.12■□□□□ 0.01
BRF1-218ENST00000550692 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
BRF1-218ENST00000550692 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
BRF1-218ENST00000550692 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
BRF1-218ENST00000550692 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
BRF1-218ENST00000550692 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
BRF1-218ENST00000550692 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
BRF1-218ENST00000550692 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
BRF1-218ENST00000550692 ATG3Q9NT62 314 aa15.1■□□□□ 0.01
BRF1-218ENST00000550692 CABP4P57796 275 aa15.09■□□□□ 0.01
BRF1-218ENST00000550692 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
BRF1-218ENST00000550692 LOC102724428A0A0B4J2F2 783 aa15.08■□□□□ 0
BRF1-218ENST00000550692 SIK1P57059 783 aa15.08■□□□□ 0
BRF1-218ENST00000550692 LGR6Q9HBX8 967 aa15.08■□□□□ 0
BRF1-218ENST00000550692 TFCP2L1Q9NZI6 479 aa15.08■□□□□ 0
BRF1-218ENST00000550692 NUDCQ9Y266 331 aa15.08■□□□□ 0
BRF1-218ENST00000550692 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
BRF1-218ENST00000550692 NFATC2IPQ8NCF5 419 aa15.07■□□□□ 0
BRF1-218ENST00000550692 PNPLA7Q6ZV29 1317 aa15.07■□□□□ 0
BRF1-218ENST00000550692 TAF1LQ8IZX4 1826 aa15.06■□□□□ 0
BRF1-218ENST00000550692 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
BRF1-218ENST00000550692 PRKAR2BP31323 418 aa15.06■□□□□ 0
BRF1-218ENST00000550692 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
BRF1-218ENST00000550692 MTFR1LQ9H019 292 aa15.06■□□□□ 0
BRF1-218ENST00000550692 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
BRF1-218ENST00000550692 C5P01031 1676 aa15.06■□□□□ 0
BRF1-218ENST00000550692 SCN11AQ9UI33 1791 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms