RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 SLC27A3Q5K4L6 730 aa27.42■■□□□ 1.98
GCN1-207ENST00000550471 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
GCN1-207ENST00000550471 MEGF6O75095 1541 aa27.4■■□□□ 1.98
GCN1-207ENST00000550471 PCDH11XQ9BZA7 1347 aa27.4■■□□□ 1.98
GCN1-207ENST00000550471 PCDH11YQ9BZA8 1340 aa27.4■■□□□ 1.98
GCN1-207ENST00000550471 ANO8Q9HCE9 1232 aaPredicted RBP27.39■■□□□ 1.98
GCN1-207ENST00000550471 EMILIN1Q9Y6C2 1016 aa27.39■■□□□ 1.98
GCN1-207ENST00000550471 PANK3Q9H999 370 aa27.38■■□□□ 1.97
GCN1-207ENST00000550471 PLEKHG2Q9H7P9 1386 aa27.37■■□□□ 1.97
GCN1-207ENST00000550471 PPM1GO15355 546 aaPredicted RBP27.37■■□□□ 1.97
GCN1-207ENST00000550471 KAT6BQ8WYB5 2073 aa27.37■■□□□ 1.97
GCN1-207ENST00000550471 PPP1R1BQ9UD71 204 aaPredicted RBP27.36■■□□□ 1.97
GCN1-207ENST00000550471 BTAF1O14981 1849 aa27.36■■□□□ 1.97
GCN1-207ENST00000550471 ANKRD26Q9UPS8 1709 aa27.36■■□□□ 1.97
GCN1-207ENST00000550471 POLKQ9UBT6 870 aa27.35■■□□□ 1.97
GCN1-207ENST00000550471 RGPD2P0DJD1 1756 aa27.35■■□□□ 1.97
GCN1-207ENST00000550471 NCAPD2Q15021 1401 aa27.34■■□□□ 1.97
GCN1-207ENST00000550471 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
GCN1-207ENST00000550471 USHBP1Q8N6Y0 703 aa27.34■■□□□ 1.97
GCN1-207ENST00000550471 SYTL4Q96C24 671 aaPredicted RBP27.34■■□□□ 1.97
GCN1-207ENST00000550471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.972e-11■□□□□ 11.2
GCN1-207ENST00000550471 KNSTRNQ9Y448 316 aa27.33■■□□□ 1.97
GCN1-207ENST00000550471 SPG7Q9UQ90 795 aa27.32■■□□□ 1.96
GCN1-207ENST00000550471 MAP2P11137 1827 aaKnown RBP27.3■■□□□ 1.96
GCN1-207ENST00000550471 MTFR1LQ9H019 292 aa27.29■■□□□ 1.96
GCN1-207ENST00000550471 CASZ1Q86V15 1759 aa27.29■■□□□ 1.96
GCN1-207ENST00000550471 SHANK3Q9BYB0 1731 aa27.28■■□□□ 1.96
GCN1-207ENST00000550471 DCAF8L1A6NGE4 600 aa27.28■■□□□ 1.96
GCN1-207ENST00000550471 MORC1Q86VD1 984 aa27.27■■□□□ 1.96
GCN1-207ENST00000550471 EYA1Q99502 592 aa27.27■■□□□ 1.96
GCN1-207ENST00000550471 PAPPAQ13219 1627 aa27.27■■□□□ 1.96
GCN1-207ENST00000550471 SLC16A10Q8TF71 515 aa27.26■■□□□ 1.95
GCN1-207ENST00000550471 DOT1LQ8TEK3 1739 aa27.26■■□□□ 1.95
GCN1-207ENST00000550471 NKX1-1Q15270 411 aaPredicted RBP27.25■■□□□ 1.95
GCN1-207ENST00000550471 SMARCC1Q92922 1105 aaPredicted RBP27.24■■□□□ 1.95
GCN1-207ENST00000550471 LRRC4BQ9NT99 713 aa27.24■■□□□ 1.95
GCN1-207ENST00000550471 TNNT2P45379 298 aaPredicted RBP27.23■■□□□ 1.95
GCN1-207ENST00000550471 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
GCN1-207ENST00000550471 PKD1L3Q7Z443 1732 aa27.22■■□□□ 1.95
GCN1-207ENST00000550471 CYP27B1O15528 508 aa27.22■■□□□ 1.95
GCN1-207ENST00000550471 ZBTB7AO95365 584 aa27.22■■□□□ 1.95
GCN1-207ENST00000550471 EIF4A2Q14240 407 aaKnown RBP27.22■■□□□ 1.95
GCN1-207ENST00000550471 CCNL1Q9UK58 526 aaPredicted RBP27.22■■□□□ 1.95
GCN1-207ENST00000550471 KIF7Q2M1P5 1343 aa27.2■■□□□ 1.95
GCN1-207ENST00000550471 IFNL2Q8IZJ0 200 aa27.2■■□□□ 1.94
GCN1-207ENST00000550471 IGSF1Q8N6C5 1336 aa27.19■■□□□ 1.94
GCN1-207ENST00000550471 LY75O60449 1722 aa27.19■■□□□ 1.94
GCN1-207ENST00000550471 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
GCN1-207ENST00000550471 TFCP2L1Q9NZI6 479 aa27.18■■□□□ 1.94
GCN1-207ENST00000550471 HSP90AB1P08238 724 aaKnown RBP27.17■■□□□ 1.94
GCN1-207ENST00000550471 PTGER2P43116 358 aa27.17■■□□□ 1.94
GCN1-207ENST00000550471 PDGFDQ9GZP0 370 aaPredicted RBP27.17■■□□□ 1.94
GCN1-207ENST00000550471 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
GCN1-207ENST00000550471 MPRIPQ6WCQ1 1025 aa27.16■■□□□ 1.94
GCN1-207ENST00000550471 ATF5Q9Y2D1 282 aaPredicted RBP27.16■■□□□ 1.94
GCN1-207ENST00000550471 AMOTQ4VCS5 1084 aa27.15■■□□□ 1.94
GCN1-207ENST00000550471 PLEKHO1Q53GL0 409 aaPredicted RBP27.14■■□□□ 1.94
GCN1-207ENST00000550471 AMER1Q5JTC6 1135 aaPredicted RBP27.14■■□□□ 1.94
GCN1-207ENST00000550471 FLAD1Q8NFF5 587 aa27.14■■□□□ 1.94
GCN1-207ENST00000550471 PALLDQ8WX93 1383 aa27.13■■□□□ 1.93
GCN1-207ENST00000550471 PHKG2P15735 406 aa27.13■■□□□ 1.93
GCN1-207ENST00000550471 POLD1P28340 1107 aa27.12■■□□□ 1.93
GCN1-207ENST00000550471 SGIP1Q9BQI5 828 aa27.12■■□□□ 1.93
GCN1-207ENST00000550471 TMOD3Q9NYL9 352 aa27.12■■□□□ 1.93
GCN1-207ENST00000550471 PNPLA7Q6ZV29 1317 aa27.11■■□□□ 1.93
GCN1-207ENST00000550471 ARXQ96QS3 562 aa27.1■■□□□ 1.93
GCN1-207ENST00000550471 NPC1L1Q9UHC9 1359 aa27.09■■□□□ 1.93
GCN1-207ENST00000550471 PIGBQ92521 554 aa27.09■■□□□ 1.93
GCN1-207ENST00000550471 MAP3K5Q99683 1374 aa27.09■■□□□ 1.93
GCN1-207ENST00000550471 ERVV-2B6SEH9 535 aa27.08■■□□□ 1.93
GCN1-207ENST00000550471 DCAF5Q96JK2 942 aa27.08■■□□□ 1.93
GCN1-207ENST00000550471 PER1O15534 1290 aaPredicted RBP27.07■■□□□ 1.92
GCN1-207ENST00000550471 SYT17Q9BSW7 474 aa27.05■■□□□ 1.92
GCN1-207ENST00000550471 ITGB4P16144 1822 aa27.04■■□□□ 1.92
GCN1-207ENST00000550471 KCNQ4P56696 695 aa27.04■■□□□ 1.92
GCN1-207ENST00000550471 FHDC1Q9C0D6 1143 aaPredicted RBP27.04■■□□□ 1.92
GCN1-207ENST00000550471 KDRP35968 1356 aa27.04■■□□□ 1.92
GCN1-207ENST00000550471 IL13P35225 146 aa27.03■■□□□ 1.92
GCN1-207ENST00000550471 C1orf141Q5JVX7 400 aa27.03■■□□□ 1.92
GCN1-207ENST00000550471 TOGARAM1Q9Y4F4 1720 aa27.03■■□□□ 1.92
GCN1-207ENST00000550471 LOC102724428A0A0B4J2F2 783 aa27.01■■□□□ 1.91
GCN1-207ENST00000550471 SIK1P57059 783 aa27.01■■□□□ 1.91
GCN1-207ENST00000550471 SULT6B1Q6IMI4 303 aa27.01■■□□□ 1.91
GCN1-207ENST00000550471 ZNF530Q6P9A1 599 aaPredicted RBP27.01■■□□□ 1.91
GCN1-207ENST00000550471 AK7Q96M32 723 aa27.01■■□□□ 1.91
GCN1-207ENST00000550471 C5P01031 1676 aa27.01■■□□□ 1.91
GCN1-207ENST00000550471 MSH5O43196 834 aa27■■□□□ 1.91
GCN1-207ENST00000550471 MTHFSP49914 203 aa27■■□□□ 1.91
GCN1-207ENST00000550471 COL24A1Q17RW2 1714 aa26.99■■□□□ 1.91
GCN1-207ENST00000550471 COL23A1Q86Y22 540 aaPredicted RBP26.98■■□□□ 1.91
GCN1-207ENST00000550471 SSFA2P28290 1259 aa26.96■■□□□ 1.91
GCN1-207ENST00000550471 TAF1LQ8IZX4 1826 aa26.95■■□□□ 1.91
GCN1-207ENST00000550471 DIAPH1O60610 1272 aaKnown RBP26.95■■□□□ 1.9
GCN1-207ENST00000550471 CABP4P57796 275 aa26.95■■□□□ 1.9
GCN1-207ENST00000550471 CC2D1BQ5T0F9 858 aaKnown RBP26.95■■□□□ 1.9
GCN1-207ENST00000550471 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
GCN1-207ENST00000550471 ASAP1Q9ULH1 1129 aa26.95■■□□□ 1.9
GCN1-207ENST00000550471 TUBGCP6Q96RT7 1819 aa26.95■■□□□ 1.9
GCN1-207ENST00000550471 ATP6V1AP38606 617 aa26.94■■□□□ 1.9
GCN1-207ENST00000550471 AEBP1Q8IUX7 1158 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms