RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
AC138331.1-201ENST00000549993 BTAF1O14981 1849 aa13.66□□□□□ -0.22
AC138331.1-201ENST00000549993 PIK3C2AO00443 1686 aa13.66□□□□□ -0.22
AC138331.1-201ENST00000549993 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
AC138331.1-201ENST00000549993 HTRA3P83110 453 aa13.64□□□□□ -0.23
AC138331.1-201ENST00000549993 USP31Q70CQ4 1352 aa13.63□□□□□ -0.23
AC138331.1-201ENST00000549993 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
AC138331.1-201ENST00000549993 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
AC138331.1-201ENST00000549993 FSTL1Q12841 308 aa13.62□□□□□ -0.23
AC138331.1-201ENST00000549993 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
AC138331.1-201ENST00000549993 USP47Q96K76 1375 aa13.6□□□□□ -0.23
AC138331.1-201ENST00000549993 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
AC138331.1-201ENST00000549993 IP6K1Q92551 441 aa13.59□□□□□ -0.23
AC138331.1-201ENST00000549993 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.23
AC138331.1-201ENST00000549993 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
AC138331.1-201ENST00000549993 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
AC138331.1-201ENST00000549993 NME9Q86XW9 330 aa13.57□□□□□ -0.24
AC138331.1-201ENST00000549993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC138331.1-201ENST00000549993 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
AC138331.1-201ENST00000549993 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
AC138331.1-201ENST00000549993 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
AC138331.1-201ENST00000549993 TGFB2P61812 414 aa13.55□□□□□ -0.24
AC138331.1-201ENST00000549993 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
AC138331.1-201ENST00000549993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
AC138331.1-201ENST00000549993 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
AC138331.1-201ENST00000549993 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 AK7Q96M32 723 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 LY75O60449 1722 aa13.53□□□□□ -0.24
AC138331.1-201ENST00000549993 SSFA2P28290 1259 aa13.52□□□□□ -0.25
AC138331.1-201ENST00000549993 C9orf131Q5VYM1 1079 aa13.52□□□□□ -0.25
AC138331.1-201ENST00000549993 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
AC138331.1-201ENST00000549993 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
AC138331.1-201ENST00000549993 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.25
AC138331.1-201ENST00000549993 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
AC138331.1-201ENST00000549993 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
AC138331.1-201ENST00000549993 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
AC138331.1-201ENST00000549993 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 C10orf71Q711Q0 1435 aa13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 PHF14O94880 888 aa13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 SMC1BQ8NDV3 1235 aa13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
AC138331.1-201ENST00000549993 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
AC138331.1-201ENST00000549993 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
AC138331.1-201ENST00000549993 MMP10P09238 476 aa13.49□□□□□ -0.25
AC138331.1-201ENST00000549993 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
AC138331.1-201ENST00000549993 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
AC138331.1-201ENST00000549993 HOXC9P31274 260 aa13.48□□□□□ -0.25
AC138331.1-201ENST00000549993 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
AC138331.1-201ENST00000549993 MEGF6O75095 1541 aa13.48□□□□□ -0.25
AC138331.1-201ENST00000549993 FCHSD2O94868 740 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 DPEP1P16444 411 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 KCNA3P22001 575 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
AC138331.1-201ENST00000549993 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
AC138331.1-201ENST00000549993 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
AC138331.1-201ENST00000549993 HDGFL2Q7Z4V5 671 aaPredicted RBP13.45□□□□□ -0.26
AC138331.1-201ENST00000549993 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
AC138331.1-201ENST00000549993 PIGBQ92521 554 aa13.45□□□□□ -0.26
AC138331.1-201ENST00000549993 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 CYP27B1O15528 508 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 SIK1P57059 783 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 RAPGEF4Q8WZA2 1011 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
AC138331.1-201ENST00000549993 AMPHP49418 695 aa13.43□□□□□ -0.26
AC138331.1-201ENST00000549993 TMF1P82094 1093 aa13.43□□□□□ -0.26
AC138331.1-201ENST00000549993 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
AC138331.1-201ENST00000549993 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
AC138331.1-201ENST00000549993 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
AC138331.1-201ENST00000549993 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 GNPATO15228 680 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 FBLN1P23142 703 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 PIM2Q9P1W9 311 aa13.42□□□□□ -0.26
AC138331.1-201ENST00000549993 C5P01031 1676 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 ITPK1Q13572 414 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
AC138331.1-201ENST00000549993 DALRD3Q5D0E6 543 aaKnown RBP13.4□□□□□ -0.26
AC138331.1-201ENST00000549993 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
AC138331.1-201ENST00000549993 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
AC138331.1-201ENST00000549993 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms