RNA–Protein interactions for RNA: ENST00000549818.5

TUBA1C-206, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-206ENST00000549818 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
TUBA1C-206ENST00000549818 IL2RBP14784 551 aa12.75□□□□□ -0.37
TUBA1C-206ENST00000549818 CCDC184Q52MB2 194 aa12.75□□□□□ -0.37
TUBA1C-206ENST00000549818 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
TUBA1C-206ENST00000549818 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 SOCS7O14512 581 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 PDE3BQ13370 1112 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 DDB1Q16531 1140 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
TUBA1C-206ENST00000549818 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
TUBA1C-206ENST00000549818 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
TUBA1C-206ENST00000549818 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.372e-9■■■□□ 17.5
TUBA1C-206ENST00000549818 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
TUBA1C-206ENST00000549818 ITGB4P16144 1822 aa12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 HMOX1P09601 288 aa12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 CDCA7Q9BWT1 371 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 BTAF1O14981 1849 aa12.72□□□□□ -0.37
TUBA1C-206ENST00000549818 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 FCHSD2O94868 740 aa12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
TUBA1C-206ENST00000549818 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
TUBA1C-206ENST00000549818 EXOC5O00471 708 aa12.7□□□□□ -0.38
TUBA1C-206ENST00000549818 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
TUBA1C-206ENST00000549818 KDRP35968 1356 aa12.69□□□□□ -0.38
TUBA1C-206ENST00000549818 TRIM37O94972 964 aa12.69□□□□□ -0.38
TUBA1C-206ENST00000549818 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
TUBA1C-206ENST00000549818 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
TUBA1C-206ENST00000549818 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
TUBA1C-206ENST00000549818 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
TUBA1C-206ENST00000549818 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
TUBA1C-206ENST00000549818 DEFB132Q7Z7B7 95 aa12.67□□□□□ -0.38
TUBA1C-206ENST00000549818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBA1C-206ENST00000549818 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
TUBA1C-206ENST00000549818 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
TUBA1C-206ENST00000549818 CYP27B1O15528 508 aa12.65□□□□□ -0.38
TUBA1C-206ENST00000549818 KCNQ2O43526 872 aa12.65□□□□□ -0.38
TUBA1C-206ENST00000549818 FAM196AQ6ZSG2 479 aa12.65□□□□□ -0.38
TUBA1C-206ENST00000549818 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
TUBA1C-206ENST00000549818 NEFMP07197 916 aa12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 NUP188Q5SRE5 1749 aa12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 RREB1Q92766 1687 aa12.64□□□□□ -0.39
TUBA1C-206ENST00000549818 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
TUBA1C-206ENST00000549818 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
TUBA1C-206ENST00000549818 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
TUBA1C-206ENST00000549818 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
TUBA1C-206ENST00000549818 APBA3O96018 575 aa12.62□□□□□ -0.39
TUBA1C-206ENST00000549818 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
TUBA1C-206ENST00000549818 SF3B2Q13435 895 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-206ENST00000549818 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-206ENST00000549818 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
TUBA1C-206ENST00000549818 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
TUBA1C-206ENST00000549818 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
TUBA1C-206ENST00000549818 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
TUBA1C-206ENST00000549818 PHKG2P15735 406 aa12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 RGPD3A6NKT7 1758 aaPredicted RBP12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
TUBA1C-206ENST00000549818 LY75O60449 1722 aa12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 EZH2Q15910 746 aaKnown RBP12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
TUBA1C-206ENST00000549818 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
TUBA1C-206ENST00000549818 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
TUBA1C-206ENST00000549818 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
TUBA1C-206ENST00000549818 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
TUBA1C-206ENST00000549818 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
TUBA1C-206ENST00000549818 BCL9O00512 1426 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 APAF1O14727 1248 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 BAG6P46379 1132 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 KCNQ4P56696 695 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 DCAF5Q96JK2 942 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 TAF1LQ8IZX4 1826 aa12.57□□□□□ -0.4
TUBA1C-206ENST00000549818 RIPK4P57078 832 aa12.56□□□□□ -0.4
TUBA1C-206ENST00000549818 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
TUBA1C-206ENST00000549818 ADAMTS7Q9UKP4 1686 aa12.56□□□□□ -0.4
TUBA1C-206ENST00000549818 C5P01031 1676 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms