RNA–Protein interactions for RNA: ENST00000549546.5

TGIF1-214, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 5

Gene TGIF1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-214ENST00000549546 TIE1P35590 1138 aa6.9□□□□□ -1.3
TGIF1-214ENST00000549546 BARGINQ6ZT62 677 aa6.9□□□□□ -1.3
TGIF1-214ENST00000549546 PCDH10Q9P2E7 1040 aa6.9□□□□□ -1.3
TGIF1-214ENST00000549546 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
TGIF1-214ENST00000549546 SMG6Q86US8 1419 aaKnown RBP6.9□□□□□ -1.31
TGIF1-214ENST00000549546 BRWD3Q6RI45 1802 aa6.9□□□□□ -1.31
TGIF1-214ENST00000549546 ZNF316A6NFI3 1004 aaPredicted RBP6.89□□□□□ -1.31
TGIF1-214ENST00000549546 ZC3H6P61129 1189 aaKnown RBP6.89□□□□□ -1.31
TGIF1-214ENST00000549546 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 NME9Q86XW9 330 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
TGIF1-214ENST00000549546 COG3Q96JB2 828 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 PCDHB13Q9Y5F0 798 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 ERBB3P21860 1342 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 CGNL1Q0VF96 1302 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 WDR17Q8IZU2 1322 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 CCDC7Q96M83 1385 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 PLEKHG2Q9H7P9 1386 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 DISP2A7MBM2 1401 aa6.89□□□□□ -1.31
TGIF1-214ENST00000549546 RGPD3A6NKT7 1758 aaPredicted RBP6.88□□□□□ -1.31
TGIF1-214ENST00000549546 RGPD4Q7Z3J3 1758 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 RGPD5Q99666 1765 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 RGPD1P0DJD0 1748 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 PEAK1Q9H792 1746 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 BCL9O00512 1426 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 CHRNA2Q15822 529 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 BCL11AQ9H165 835 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
TGIF1-214ENST00000549546 NCAPD2Q15021 1401 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 TNS2Q63HR2 1409 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 FLT4P35916 1363 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 NPC1L1Q9UHC9 1359 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 KIF7Q2M1P5 1343 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 C11orf95C9JLR9 678 aaPredicted RBP6.87□□□□□ -1.31
TGIF1-214ENST00000549546 FYB1O15117 783 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 TCP11L2Q8N4U5 519 aa6.87□□□□□ -1.31
TGIF1-214ENST00000549546 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
TGIF1-214ENST00000549546 TNS1Q9HBL0 1735 aaKnown RBP6.87□□□□□ -1.31
TGIF1-214ENST00000549546 OVOS2A0A0G2JMS6 1433 aa6.86□□□□□ -1.31
TGIF1-214ENST00000549546 LARP1Q6PKG0 1096 aaKnown RBP6.86□□□□□ -1.31
TGIF1-214ENST00000549546 CCDC125Q86Z20 511 aa6.86□□□□□ -1.31
TGIF1-214ENST00000549546 SEPT12Q8IYM1 358 aa6.86□□□□□ -1.31
TGIF1-214ENST00000549546 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
TGIF1-214ENST00000549546 CARD14Q9BXL6 1004 aa6.86□□□□□ -1.31
TGIF1-214ENST00000549546 INSRP06213 1382 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 MAP3K19Q56UN5 1328 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 EVA1CP58658 441 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 FAM98CQ17RN3 349 aaKnown RBP6.85□□□□□ -1.31
TGIF1-214ENST00000549546 KRT27Q7Z3Y8 459 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 CDAN1Q8IWY9 1227 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 SLAIN1Q8ND83 568 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 IP6K1Q92551 441 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 UPF1Q92900 1129 aaKnown RBP eCLIP6.85□□□□□ -1.31
TGIF1-214ENST00000549546 STRN4Q9NRL3 753 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 AXIN2Q9Y2T1 843 aa6.85□□□□□ -1.31
TGIF1-214ENST00000549546 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
TGIF1-214ENST00000549546 HOXC9P31274 260 aa6.84□□□□□ -1.31
TGIF1-214ENST00000549546 IFNL1Q8IU54 200 aa6.84□□□□□ -1.31
TGIF1-214ENST00000549546 PKD1L3Q7Z443 1732 aa6.84□□□□□ -1.31
TGIF1-214ENST00000549546 PARD3Q8TEW0 1356 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 WASHC2AQ641Q2 1341 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 PRKCSHP14314 528 aaPredicted RBP6.83□□□□□ -1.32
TGIF1-214ENST00000549546 NUBP1P53384 320 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 ANKRD24Q8TF21 1146 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 TMEM106CQ9BVX2 250 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 SHANK3Q9BYB0 1731 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 NHSQ6T4R5 1651 aa6.83□□□□□ -1.32
TGIF1-214ENST00000549546 RREB1Q92766 1687 aa6.82□□□□□ -1.32
TGIF1-214ENST00000549546 SOX12O15370 315 aa6.82□□□□□ -1.32
TGIF1-214ENST00000549546 AMER1Q5JTC6 1135 aaPredicted RBP6.82□□□□□ -1.32
TGIF1-214ENST00000549546 PANK3Q9H999 370 aa6.82□□□□□ -1.32
TGIF1-214ENST00000549546 KNSTRNQ9Y448 316 aa6.82□□□□□ -1.32
TGIF1-214ENST00000549546 MAP2P11137 1827 aaKnown RBP6.82□□□□□ -1.32
TGIF1-214ENST00000549546 SBF2Q86WG5 1849 aa6.82□□□□□ -1.32
TGIF1-214ENST00000549546 A0A0G2JS52 829 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 PER1O15534 1290 aaPredicted RBP6.81□□□□□ -1.32
TGIF1-214ENST00000549546 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 AMPHP49418 695 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 POLR3GLQ9BT43 218 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 GTF3C3Q9Y5Q9 886 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 MEGF6O75095 1541 aa6.81□□□□□ -1.32
TGIF1-214ENST00000549546 RGPD2P0DJD1 1756 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 ZBTB7CA1YPR0 619 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 ST18O60284 1047 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 IL2RBP14784 551 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 RRS1Q15050 365 aaKnown RBP6.8□□□□□ -1.32
TGIF1-214ENST00000549546 DDB1Q16531 1140 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 USP35Q9P2H5 1018 aa6.8□□□□□ -1.32
TGIF1-214ENST00000549546 PLCG2P16885 1265 aa6.79□□□□□ -1.32
TGIF1-214ENST00000549546 DDX10Q13206 875 aaKnown RBP6.79□□□□□ -1.32
TGIF1-214ENST00000549546 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
TGIF1-214ENST00000549546 POLKQ9UBT6 870 aa6.79□□□□□ -1.32
TGIF1-214ENST00000549546 EMILIN1Q9Y6C2 1016 aa6.79□□□□□ -1.32
TGIF1-214ENST00000549546 KDRP35968 1356 aa6.79□□□□□ -1.32
TGIF1-214ENST00000549546 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
TGIF1-214ENST00000549546 NUP188Q5SRE5 1749 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms