RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-208ENST00000548883 NBPF4Q96M43 638 aa28.24■■■□□ 2.11
C12orf42-208ENST00000548883 ZCRB1Q8TBF4 217 aaKnown RBP28.23■■■□□ 2.11
C12orf42-208ENST00000548883 POLR3GLQ9BT43 218 aa28.23■■■□□ 2.11
C12orf42-208ENST00000548883 SLC15A2Q16348 729 aa28.22■■■□□ 2.11
C12orf42-208ENST00000548883 HSP90AB2PQ58FF8 381 aa28.22■■■□□ 2.11
C12orf42-208ENST00000548883 RAPGEF4Q8WZA2 1011 aa28.21■■■□□ 2.11
C12orf42-208ENST00000548883 PPP1R1BQ9UD71 204 aaPredicted RBP28.21■■■□□ 2.11
C12orf42-208ENST00000548883 USHBP1Q8N6Y0 703 aa28.2■■■□□ 2.11
C12orf42-208ENST00000548883 MAP2P11137 1827 aaKnown RBP28.2■■■□□ 2.11
C12orf42-208ENST00000548883 HSPA5P11021 654 aaKnown RBP28.19■■■□□ 2.1
C12orf42-208ENST00000548883 EMILIN1Q9Y6C2 1016 aa28.19■■■□□ 2.1
C12orf42-208ENST00000548883 TATP17735 454 aaPredicted RBP28.18■■■□□ 2.1
C12orf42-208ENST00000548883 SYTL4Q96C24 671 aaPredicted RBP28.18■■■□□ 2.1
C12orf42-208ENST00000548883 LY75O60449 1722 aa28.17■■■□□ 2.1
C12orf42-208ENST00000548883 PKD1L3Q7Z443 1732 aa28.15■■■□□ 2.1
C12orf42-208ENST00000548883 PDGFDQ9GZP0 370 aaPredicted RBP28.15■■■□□ 2.1
C12orf42-208ENST00000548883 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.1
C12orf42-208ENST00000548883 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.1
C12orf42-208ENST00000548883 PPM1GO15355 546 aaPredicted RBP28.14■■■□□ 2.09
C12orf42-208ENST00000548883 PRIM1P49642 420 aaKnown RBP28.14■■■□□ 2.09
C12orf42-208ENST00000548883 SLC27A3Q5K4L6 730 aa28.14■■■□□ 2.09
C12orf42-208ENST00000548883 NSD2O96028 1365 aa28.13■■■□□ 2.09
C12orf42-208ENST00000548883 QSER1Q2KHR3 1735 aa28.13■■■□□ 2.09
C12orf42-208ENST00000548883 NCAPD2Q15021 1401 aa28.13■■■□□ 2.09
C12orf42-208ENST00000548883 ZBTB7AO95365 584 aa28.13■■■□□ 2.09
C12orf42-208ENST00000548883 WASHC2AQ641Q2 1341 aa28.11■■■□□ 2.09
C12orf42-208ENST00000548883 LRRC4BQ9NT99 713 aa28.11■■■□□ 2.09
C12orf42-208ENST00000548883 MTFR1LQ9H019 292 aa28.09■■■□□ 2.09
C12orf42-208ENST00000548883 ZNF827Q17R98 1081 aa28.07■■■□□ 2.08
C12orf42-208ENST00000548883 PANK3Q9H999 370 aa28.07■■■□□ 2.08
C12orf42-208ENST00000548883 POLKQ9UBT6 870 aa28.07■■■□□ 2.08
C12orf42-208ENST00000548883 TUBGCP6Q96RT7 1819 aa28.05■■■□□ 2.08
C12orf42-208ENST00000548883 TOGARAM1Q9Y4F4 1720 aa28.05■■■□□ 2.08
C12orf42-208ENST00000548883 PTGER2P43116 358 aa28.05■■■□□ 2.08
C12orf42-208ENST00000548883 ATF5Q9Y2D1 282 aaPredicted RBP28.05■■■□□ 2.08
C12orf42-208ENST00000548883 TNNT2P45379 298 aaPredicted RBP28.03■■■□□ 2.08
C12orf42-208ENST00000548883 AKT1S1Q96B36 256 aa28.03■■■□□ 2.08
C12orf42-208ENST00000548883 ITGB4P16144 1822 aa28.03■■■□□ 2.08
C12orf42-208ENST00000548883 C5P01031 1676 aa28■■■□□ 2.07
C12orf42-208ENST00000548883 DCAF8L1A6NGE4 600 aa28■■■□□ 2.07
C12orf42-208ENST00000548883 CYP27B1O15528 508 aa28■■■□□ 2.07
C12orf42-208ENST00000548883 EYA1Q99502 592 aa28■■■□□ 2.07
C12orf42-208ENST00000548883 CCNL1Q9UK58 526 aaPredicted RBP28■■■□□ 2.07
C12orf42-208ENST00000548883 SPG7Q9UQ90 795 aa28■■■□□ 2.07
C12orf42-208ENST00000548883 PLEKHG2Q9H7P9 1386 aa27.98■■■□□ 2.07
C12orf42-208ENST00000548883 KCNQ4P56696 695 aa27.97■■■□□ 2.07
C12orf42-208ENST00000548883 EIF4A2Q14240 407 aaKnown RBP27.97■■■□□ 2.07
C12orf42-208ENST00000548883 SGIP1Q9BQI5 828 aa27.97■■■□□ 2.07
C12orf42-208ENST00000548883 TFCP2L1Q9NZI6 479 aa27.97■■■□□ 2.07
C12orf42-208ENST00000548883 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
C12orf42-208ENST00000548883 SLC16A10Q8TF71 515 aa27.96■■■□□ 2.07
C12orf42-208ENST00000548883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.96■■■□□ 2.07
C12orf42-208ENST00000548883 COL24A1Q17RW2 1714 aa27.96■■■□□ 2.07
C12orf42-208ENST00000548883 PALLDQ8WX93 1383 aa27.95■■■□□ 2.06
C12orf42-208ENST00000548883 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.06
C12orf42-208ENST00000548883 HMGB2P26583 209 aaKnown RBP27.94■■■□□ 2.06
C12orf42-208ENST00000548883 MPRIPQ6WCQ1 1025 aa27.94■■■□□ 2.06
C12orf42-208ENST00000548883 KNSTRNQ9Y448 316 aa27.94■■■□□ 2.06
C12orf42-208ENST00000548883 MORC1Q86VD1 984 aa27.93■■■□□ 2.06
C12orf42-208ENST00000548883 NKX1-1Q15270 411 aaPredicted RBP27.92■■■□□ 2.06
C12orf42-208ENST00000548883 IGSF1Q8N6C5 1336 aa27.92■■■□□ 2.06
C12orf42-208ENST00000548883 ARXQ96QS3 562 aa27.92■■■□□ 2.06
C12orf42-208ENST00000548883 FHDC1Q9C0D6 1143 aaPredicted RBP27.92■■■□□ 2.06
C12orf42-208ENST00000548883 KIF7Q2M1P5 1343 aa27.91■■■□□ 2.06
C12orf42-208ENST00000548883 SMARCC1Q92922 1105 aaPredicted RBP27.91■■■□□ 2.06
C12orf42-208ENST00000548883 IFNL2Q8IZJ0 200 aa27.9■■■□□ 2.06
C12orf42-208ENST00000548883 SYT17Q9BSW7 474 aa27.89■■■□□ 2.05
C12orf42-208ENST00000548883 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
C12orf42-208ENST00000548883 PHKG2P15735 406 aa27.88■■■□□ 2.05
C12orf42-208ENST00000548883 POLD1P28340 1107 aa27.88■■■□□ 2.05
C12orf42-208ENST00000548883 C4BP0C0L5 1744 aa27.87■■■□□ 2.05
C12orf42-208ENST00000548883 PIGBQ92521 554 aa27.85■■■□□ 2.05
C12orf42-208ENST00000548883 TMOD3Q9NYL9 352 aa27.85■■■□□ 2.05
C12orf42-208ENST00000548883 YY1P25490 414 aa27.83■■■□□ 2.05
C12orf42-208ENST00000548883 MSH5O43196 834 aa27.82■■■□□ 2.04
C12orf42-208ENST00000548883 AMER1Q5JTC6 1135 aaPredicted RBP27.82■■■□□ 2.04
C12orf42-208ENST00000548883 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
C12orf42-208ENST00000548883 FLAD1Q8NFF5 587 aa27.8■■■□□ 2.04
C12orf42-208ENST00000548883 UBR3Q6ZT12 1888 aa27.8■■■□□ 2.04
C12orf42-208ENST00000548883 HSP90AB1P08238 724 aaKnown RBP27.79■■■□□ 2.04
C12orf42-208ENST00000548883 PLEKHO1Q53GL0 409 aaPredicted RBP27.79■■■□□ 2.04
C12orf42-208ENST00000548883 AMOTQ4VCS5 1084 aa27.78■■■□□ 2.04
C12orf42-208ENST00000548883 AK7Q96M32 723 aa27.78■■■□□ 2.04
C12orf42-208ENST00000548883 LOC102724428A0A0B4J2F2 783 aa27.76■■■□□ 2.03
C12orf42-208ENST00000548883 SIK1P57059 783 aa27.76■■■□□ 2.03
C12orf42-208ENST00000548883 KLHL34Q8N239 644 aa27.76■■■□□ 2.03
C12orf42-208ENST00000548883 KDRP35968 1356 aa27.76■■■□□ 2.03
C12orf42-208ENST00000548883 DCAF5Q96JK2 942 aa27.75■■■□□ 2.03
C12orf42-208ENST00000548883 ERVV-2B6SEH9 535 aa27.74■■■□□ 2.03
C12orf42-208ENST00000548883 ZNF530Q6P9A1 599 aaPredicted RBP27.74■■■□□ 2.03
C12orf42-208ENST00000548883 AEBP1Q8IUX7 1158 aa27.74■■■□□ 2.03
C12orf42-208ENST00000548883 ZNF831Q5JPB2 1677 aa27.74■■■□□ 2.03
C12orf42-208ENST00000548883 ASAP1Q9ULH1 1129 aa27.73■■■□□ 2.03
C12orf42-208ENST00000548883 KDM6AO15550 1401 aaPredicted RBP27.72■■■□□ 2.03
C12orf42-208ENST00000548883 PER1O15534 1290 aaPredicted RBP27.72■■■□□ 2.03
C12orf42-208ENST00000548883 IL13P35225 146 aa27.72■■■□□ 2.03
C12orf42-208ENST00000548883 SULT6B1Q6IMI4 303 aa27.72■■■□□ 2.03
C12orf42-208ENST00000548883 CHD4Q14839 1912 aa27.71■■■□□ 2.03
C12orf42-208ENST00000548883 ATP6V1AP38606 617 aa27.7■■■□□ 2.03
C12orf42-208ENST00000548883 C1orf141Q5JVX7 400 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms