RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TUBGCP6Q96RT7 1819 aa23.22■■□□□ 1.31
SSH1-208ENST00000548522 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
SSH1-208ENST00000548522 RRS1Q15050 365 aaKnown RBP23.21■■□□□ 1.31
SSH1-208ENST00000548522 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
SSH1-208ENST00000548522 USHBP1Q8N6Y0 703 aa23.2■■□□□ 1.3
SSH1-208ENST00000548522 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
SSH1-208ENST00000548522 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
SSH1-208ENST00000548522 ZCRB1Q8TBF4 217 aaKnown RBP23.18■■□□□ 1.3
SSH1-208ENST00000548522 RTL1A6NKG5 1358 aa23.17■■□□□ 1.3
SSH1-208ENST00000548522 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
SSH1-208ENST00000548522 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
SSH1-208ENST00000548522 GGNBP2Q9H3C7 697 aa23.17■■□□□ 1.3
SSH1-208ENST00000548522 TFCP2L1Q9NZI6 479 aa23.17■■□□□ 1.3
SSH1-208ENST00000548522 LY75O60449 1722 aa23.16■■□□□ 1.3
SSH1-208ENST00000548522 FYB1O15117 783 aa23.15■■□□□ 1.3
SSH1-208ENST00000548522 COL24A1Q17RW2 1714 aa23.15■■□□□ 1.3
SSH1-208ENST00000548522 NLGN2Q8NFZ4 835 aa23.14■■□□□ 1.29
SSH1-208ENST00000548522 SLC16A10Q8TF71 515 aa23.14■■□□□ 1.29
SSH1-208ENST00000548522 GPR162Q16538 588 aa23.13■■□□□ 1.29
SSH1-208ENST00000548522 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
SSH1-208ENST00000548522 USP47Q96K76 1375 aa23.13■■□□□ 1.29
SSH1-208ENST00000548522 POLD1P28340 1107 aa23.12■■□□□ 1.29
SSH1-208ENST00000548522 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
SSH1-208ENST00000548522 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
SSH1-208ENST00000548522 CHD4Q14839 1912 aa23.1■■□□□ 1.29
SSH1-208ENST00000548522 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
SSH1-208ENST00000548522 COL23A1Q86Y22 540 aaPredicted RBP23.08■■□□□ 1.29
SSH1-208ENST00000548522 TMF1P82094 1093 aa23.07■■□□□ 1.28
SSH1-208ENST00000548522 MSL1Q68DK7 614 aa23.07■■□□□ 1.28
SSH1-208ENST00000548522 RAPGEF4Q8WZA2 1011 aa23.07■■□□□ 1.28
SSH1-208ENST00000548522 INSRP06213 1382 aa23.06■■□□□ 1.28
SSH1-208ENST00000548522 MSH5O43196 834 aa23.06■■□□□ 1.28
SSH1-208ENST00000548522 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
SSH1-208ENST00000548522 KIF20BQ96Q89 1820 aa23.05■■□□□ 1.28
SSH1-208ENST00000548522 FLT4P35916 1363 aa23.05■■□□□ 1.28
SSH1-208ENST00000548522 TOGARAM1Q9Y4F4 1720 aa23.05■■□□□ 1.28
SSH1-208ENST00000548522 C5P01031 1676 aa23.04■■□□□ 1.28
SSH1-208ENST00000548522 SLC24A1O60721 1099 aa23.04■■□□□ 1.28
SSH1-208ENST00000548522 YBX3P16989 372 aaKnown RBP eCLIP23.04■■□□□ 1.28
SSH1-208ENST00000548522 TATP17735 454 aaPredicted RBP23.04■■□□□ 1.28
SSH1-208ENST00000548522 PCDH11XQ9BZA7 1347 aa23.04■■□□□ 1.28
SSH1-208ENST00000548522 PCDH11YQ9BZA8 1340 aa23.04■■□□□ 1.28
SSH1-208ENST00000548522 PALLDQ8WX93 1383 aa23.03■■□□□ 1.28
SSH1-208ENST00000548522 CYP27B1O15528 508 aa23.03■■□□□ 1.28
SSH1-208ENST00000548522 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
SSH1-208ENST00000548522 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
SSH1-208ENST00000548522 EMILIN1Q9Y6C2 1016 aa23.03■■□□□ 1.28
SSH1-208ENST00000548522 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
SSH1-208ENST00000548522 NSD3Q9BZ95 1437 aa23.01■■□□□ 1.27
SSH1-208ENST00000548522 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
SSH1-208ENST00000548522 AMIGO3Q86WK7 504 aa23.01■■□□□ 1.27
SSH1-208ENST00000548522 SMIM5Q71RC9 77 aa22.98■■□□□ 1.27
SSH1-208ENST00000548522 KIF24Q5T7B8 1368 aa22.98■■□□□ 1.27
SSH1-208ENST00000548522 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
SSH1-208ENST00000548522 PKD1L3Q7Z443 1732 aa22.97■■□□□ 1.27
SSH1-208ENST00000548522 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
SSH1-208ENST00000548522 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
SSH1-208ENST00000548522 TAF1LQ8IZX4 1826 aa22.95■■□□□ 1.26
SSH1-208ENST00000548522 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
SSH1-208ENST00000548522 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
SSH1-208ENST00000548522 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
SSH1-208ENST00000548522 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
SSH1-208ENST00000548522 PIGBQ92521 554 aa22.93■■□□□ 1.26
SSH1-208ENST00000548522 ITGB4P16144 1822 aa22.92■■□□□ 1.26
SSH1-208ENST00000548522 PHF14O94880 888 aa22.91■■□□□ 1.26
SSH1-208ENST00000548522 AK7Q96M32 723 aa22.91■■□□□ 1.26
SSH1-208ENST00000548522 GRIN3BO60391 1043 aa22.89■■□□□ 1.25
SSH1-208ENST00000548522 LINC00116Q8NCU8 138 aa22.89■■□□□ 1.25
SSH1-208ENST00000548522 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
SSH1-208ENST00000548522 NKX1-1Q15270 411 aaPredicted RBP22.88■■□□□ 1.25
SSH1-208ENST00000548522 FLAD1Q8NFF5 587 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
SSH1-208ENST00000548522 EYA1Q99502 592 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 WWC3Q9ULE0 1092 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 CD2APQ9Y5K6 639 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
SSH1-208ENST00000548522 WASHC2AQ641Q2 1341 aa22.87■■□□□ 1.25
SSH1-208ENST00000548522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.87■■□□□ 1.25
SSH1-208ENST00000548522 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 SIK1P57059 783 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 ITPK1Q13572 414 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 POLKQ9UBT6 870 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 ASAP1Q9ULH1 1129 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 SPG7Q9UQ90 795 aa22.85■■□□□ 1.25
SSH1-208ENST00000548522 PHKG2P15735 406 aa22.83■■□□□ 1.25
SSH1-208ENST00000548522 TMOD3Q9NYL9 352 aa22.83■■□□□ 1.25
SSH1-208ENST00000548522 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
SSH1-208ENST00000548522 ADCY9O60503 1353 aa22.82■■□□□ 1.24
SSH1-208ENST00000548522 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
SSH1-208ENST00000548522 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
SSH1-208ENST00000548522 GNPATO15228 680 aa22.81■■□□□ 1.24
SSH1-208ENST00000548522 SSFA2P28290 1259 aa22.81■■□□□ 1.24
SSH1-208ENST00000548522 EIF4A2Q14240 407 aaKnown RBP22.81■■□□□ 1.24
SSH1-208ENST00000548522 POLR3GLQ9BT43 218 aa22.81■■□□□ 1.24
SSH1-208ENST00000548522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.8■■□□□ 1.24
SSH1-208ENST00000548522 ZNF526Q8TF50 670 aaPredicted RBP22.79■■□□□ 1.24
SSH1-208ENST00000548522 ATG3Q9NT62 314 aa22.79■■□□□ 1.24
SSH1-208ENST00000548522 KDRP35968 1356 aa22.78■■□□□ 1.24
SSH1-208ENST00000548522 ATP6V1AP38606 617 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms