RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 LY75O60449 1722 aa20.81■□□□□ 0.92
C12orf49-204ENST00000548356 TMC1Q8TDI8 760 aa20.81■□□□□ 0.92
C12orf49-204ENST00000548356 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
C12orf49-204ENST00000548356 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
C12orf49-204ENST00000548356 SLC12A5Q9H2X9 1139 aa20.78■□□□□ 0.92
C12orf49-204ENST00000548356 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
C12orf49-204ENST00000548356 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
C12orf49-204ENST00000548356 LTV1Q96GA3 475 aaPredicted RBP20.77■□□□□ 0.92
C12orf49-204ENST00000548356 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
C12orf49-204ENST00000548356 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
C12orf49-204ENST00000548356 ZCRB1Q8TBF4 217 aaKnown RBP20.76■□□□□ 0.91
C12orf49-204ENST00000548356 SIN3AQ96ST3 1273 aa20.76■□□□□ 0.91
C12orf49-204ENST00000548356 MSH5O43196 834 aa20.75■□□□□ 0.91
C12orf49-204ENST00000548356 USP47Q96K76 1375 aa20.74■□□□□ 0.91
C12orf49-204ENST00000548356 PUS7Q96PZ0 661 aaKnown RBP20.74■□□□□ 0.91
C12orf49-204ENST00000548356 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
C12orf49-204ENST00000548356 HMGB2P26583 209 aaKnown RBP20.73■□□□□ 0.91
C12orf49-204ENST00000548356 HOXC9P31274 260 aa20.73■□□□□ 0.91
C12orf49-204ENST00000548356 MEGF6O75095 1541 aa20.73■□□□□ 0.91
C12orf49-204ENST00000548356 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
C12orf49-204ENST00000548356 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
C12orf49-204ENST00000548356 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
C12orf49-204ENST00000548356 MSL1Q68DK7 614 aa20.71■□□□□ 0.91
C12orf49-204ENST00000548356 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
C12orf49-204ENST00000548356 ADCY9O60503 1353 aa20.71■□□□□ 0.91
C12orf49-204ENST00000548356 AMPHP49418 695 aa20.7■□□□□ 0.9
C12orf49-204ENST00000548356 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
C12orf49-204ENST00000548356 COG3Q96JB2 828 aa20.7■□□□□ 0.9
C12orf49-204ENST00000548356 CGNL1Q0VF96 1302 aa20.7■□□□□ 0.9
C12orf49-204ENST00000548356 HSPA6P17066 643 aa20.69■□□□□ 0.9
C12orf49-204ENST00000548356 RTL1A6NKG5 1358 aa20.67■□□□□ 0.9
C12orf49-204ENST00000548356 C5P01031 1676 aa20.67■□□□□ 0.9
C12orf49-204ENST00000548356 RGPD2P0DJD1 1756 aa20.65■□□□□ 0.9
C12orf49-204ENST00000548356 FBLN1P23142 703 aa20.64■□□□□ 0.89
C12orf49-204ENST00000548356 NBPF6Q5VWK0 638 aa20.64■□□□□ 0.89
C12orf49-204ENST00000548356 NBPF4Q96M43 638 aa20.64■□□□□ 0.89
C12orf49-204ENST00000548356 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
C12orf49-204ENST00000548356 RAPGEF4Q8WZA2 1011 aa20.63■□□□□ 0.89
C12orf49-204ENST00000548356 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
C12orf49-204ENST00000548356 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
C12orf49-204ENST00000548356 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
C12orf49-204ENST00000548356 TATP17735 454 aaPredicted RBP20.61■□□□□ 0.89
C12orf49-204ENST00000548356 ZNF526Q8TF50 670 aaPredicted RBP20.61■□□□□ 0.89
C12orf49-204ENST00000548356 TAF1LQ8IZX4 1826 aa20.6■□□□□ 0.89
C12orf49-204ENST00000548356 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
C12orf49-204ENST00000548356 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
C12orf49-204ENST00000548356 RRS1Q15050 365 aaKnown RBP20.59■□□□□ 0.89
C12orf49-204ENST00000548356 AK7Q96M32 723 aa20.59■□□□□ 0.89
C12orf49-204ENST00000548356 NSD3Q9BZ95 1437 aa20.59■□□□□ 0.89
C12orf49-204ENST00000548356 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
C12orf49-204ENST00000548356 MPRIPQ6WCQ1 1025 aa20.58■□□□□ 0.89
C12orf49-204ENST00000548356 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
C12orf49-204ENST00000548356 TESK2Q96S53 571 aa20.57■□□□□ 0.88
C12orf49-204ENST00000548356 KIF3CO14782 793 aa20.56■□□□□ 0.88
C12orf49-204ENST00000548356 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
C12orf49-204ENST00000548356 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
C12orf49-204ENST00000548356 AMIGO3Q86WK7 504 aa20.55■□□□□ 0.88
C12orf49-204ENST00000548356 INSRP06213 1382 aa20.55■□□□□ 0.88
C12orf49-204ENST00000548356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.54■□□□□ 0.88
C12orf49-204ENST00000548356 FYB1O15117 783 aa20.54■□□□□ 0.88
C12orf49-204ENST00000548356 CYP27B1O15528 508 aa20.54■□□□□ 0.88
C12orf49-204ENST00000548356 SSFA2P28290 1259 aa20.54■□□□□ 0.88
C12orf49-204ENST00000548356 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
C12orf49-204ENST00000548356 PHF14O94880 888 aa20.53■□□□□ 0.88
C12orf49-204ENST00000548356 KIF24Q5T7B8 1368 aa20.53■□□□□ 0.88
C12orf49-204ENST00000548356 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
C12orf49-204ENST00000548356 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
C12orf49-204ENST00000548356 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
C12orf49-204ENST00000548356 FLT4P35916 1363 aa20.51■□□□□ 0.87
C12orf49-204ENST00000548356 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
C12orf49-204ENST00000548356 APLP1P51693 650 aa20.51■□□□□ 0.87
C12orf49-204ENST00000548356 PIGBQ92521 554 aa20.51■□□□□ 0.87
C12orf49-204ENST00000548356 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
C12orf49-204ENST00000548356 ITGB4P16144 1822 aa20.5■□□□□ 0.87
C12orf49-204ENST00000548356 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
C12orf49-204ENST00000548356 SMIM5Q71RC9 77 aa20.49■□□□□ 0.87
C12orf49-204ENST00000548356 PKD1L3Q7Z443 1732 aa20.48■□□□□ 0.87
C12orf49-204ENST00000548356 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
C12orf49-204ENST00000548356 SIK1P57059 783 aa20.48■□□□□ 0.87
C12orf49-204ENST00000548356 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
C12orf49-204ENST00000548356 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
C12orf49-204ENST00000548356 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
C12orf49-204ENST00000548356 NCAPD2Q15021 1401 aa20.46■□□□□ 0.87
C12orf49-204ENST00000548356 TOMM70O94826 608 aa20.46■□□□□ 0.87
C12orf49-204ENST00000548356 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
C12orf49-204ENST00000548356 GNPATO15228 680 aa20.44■□□□□ 0.86
C12orf49-204ENST00000548356 TGFB2P61812 414 aa20.44■□□□□ 0.86
C12orf49-204ENST00000548356 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
C12orf49-204ENST00000548356 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
C12orf49-204ENST00000548356 MMP10P09238 476 aa20.43■□□□□ 0.86
C12orf49-204ENST00000548356 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
C12orf49-204ENST00000548356 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
C12orf49-204ENST00000548356 ITPK1Q13572 414 aa20.42■□□□□ 0.86
C12orf49-204ENST00000548356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.86
C12orf49-204ENST00000548356 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
C12orf49-204ENST00000548356 TMF1P82094 1093 aa20.41■□□□□ 0.86
C12orf49-204ENST00000548356 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
C12orf49-204ENST00000548356 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
C12orf49-204ENST00000548356 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
C12orf49-204ENST00000548356 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms