RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TESK2Q96S53 571 aa28.23■■■□□ 2.11
GATC-202ENST00000548171 UTRNP46939 3433 aa28.23■■■□□ 2.11
GATC-202ENST00000548171 PNPLA7Q6ZV29 1317 aa28.22■■■□□ 2.11
GATC-202ENST00000548171 TFCP2L1Q9NZI6 479 aa28.22■■■□□ 2.11
GATC-202ENST00000548171 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
GATC-202ENST00000548171 ZCRB1Q8TBF4 217 aaKnown RBP28.21■■■□□ 2.11
GATC-202ENST00000548171 RTL1A6NKG5 1358 aa28.21■■■□□ 2.11
GATC-202ENST00000548171 GPR162Q16538 588 aa28.2■■■□□ 2.1
GATC-202ENST00000548171 ST20-MTHFSA0A0A6YYL1 179 aa28.19■■■□□ 2.1
GATC-202ENST00000548171 NSD2O96028 1365 aa28.19■■■□□ 2.1
GATC-202ENST00000548171 MEGF6O75095 1541 aa28.18■■■□□ 2.1
GATC-202ENST00000548171 CGNL1Q0VF96 1302 aa28.18■■■□□ 2.1
GATC-202ENST00000548171 KLHL34Q8N239 644 aa28.15■■■□□ 2.1
GATC-202ENST00000548171 CCNL1Q9UK58 526 aaPredicted RBP28.14■■■□□ 2.1
GATC-202ENST00000548171 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
GATC-202ENST00000548171 KCNQ4P56696 695 aa28.13■■■□□ 2.09
GATC-202ENST00000548171 USP47Q96K76 1375 aa28.12■■■□□ 2.09
GATC-202ENST00000548171 FBLN1P23142 703 aa28.12■■■□□ 2.09
GATC-202ENST00000548171 HMGB2P26583 209 aaKnown RBP28.12■■■□□ 2.09
GATC-202ENST00000548171 KIF20BQ96Q89 1820 aa28.11■■■□□ 2.09
GATC-202ENST00000548171 C5P01031 1676 aa28.1■■■□□ 2.09
GATC-202ENST00000548171 C1QTNF8P60827 252 aa28.1■■■□□ 2.09
GATC-202ENST00000548171 NBPF6Q5VWK0 638 aa28.1■■■□□ 2.09
GATC-202ENST00000548171 RAPGEF4Q8WZA2 1011 aa28.1■■■□□ 2.09
GATC-202ENST00000548171 NBPF4Q96M43 638 aa28.1■■■□□ 2.09
GATC-202ENST00000548171 FYB1O15117 783 aa28.08■■■□□ 2.09
GATC-202ENST00000548171 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.09
GATC-202ENST00000548171 TAF1LQ8IZX4 1826 aa28.07■■■□□ 2.08
GATC-202ENST00000548171 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
GATC-202ENST00000548171 TMF1P82094 1093 aa28.06■■■□□ 2.08
GATC-202ENST00000548171 KIF24Q5T7B8 1368 aa28.06■■■□□ 2.08
GATC-202ENST00000548171 SENP3-EIF4A1A0A087X0R7 540 aa28.05■■■□□ 2.08
GATC-202ENST00000548171 NLGN2Q8NFZ4 835 aa28.05■■■□□ 2.08
GATC-202ENST00000548171 GGNBP2Q9H3C7 697 aa28.05■■■□□ 2.08
GATC-202ENST00000548171 INSRP06213 1382 aa28.04■■■□□ 2.08
GATC-202ENST00000548171 PCDH11XQ9BZA7 1347 aa28.04■■■□□ 2.08
GATC-202ENST00000548171 PCDH11YQ9BZA8 1340 aa28.04■■■□□ 2.08
GATC-202ENST00000548171 MSH5O43196 834 aa28.04■■■□□ 2.08
GATC-202ENST00000548171 TATP17735 454 aaPredicted RBP28.04■■■□□ 2.08
GATC-202ENST00000548171 COL23A1Q86Y22 540 aaPredicted RBP28.04■■■□□ 2.08
GATC-202ENST00000548171 FLT4P35916 1363 aa28.03■■■□□ 2.08
GATC-202ENST00000548171 USHBP1Q8N6Y0 703 aa28.03■■■□□ 2.08
GATC-202ENST00000548171 GRIN3BO60391 1043 aa28.02■■■□□ 2.08
GATC-202ENST00000548171 ITGB4P16144 1822 aa28.02■■■□□ 2.08
GATC-202ENST00000548171 CDCA8Q53HL2 280 aa28■■■□□ 2.07
GATC-202ENST00000548171 FLAD1Q8NFF5 587 aa28■■■□□ 2.07
GATC-202ENST00000548171 PKD1L3Q7Z443 1732 aa27.99■■■□□ 2.07
GATC-202ENST00000548171 GIGYF1O75420 1035 aaPredicted RBP27.99■■■□□ 2.07
GATC-202ENST00000548171 HSP90AB2PQ58FF8 381 aa27.99■■■□□ 2.07
GATC-202ENST00000548171 PALLDQ8WX93 1383 aa27.98■■■□□ 2.07
GATC-202ENST00000548171 TOGARAM1Q9Y4F4 1720 aa27.97■■■□□ 2.07
GATC-202ENST00000548171 C4BP0C0L5 1744 aa27.95■■■□□ 2.07
GATC-202ENST00000548171 YBX3P16989 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
GATC-202ENST00000548171 CD2APQ9Y5K6 639 aa27.95■■■□□ 2.06
GATC-202ENST00000548171 GOLGB1Q14789 3259 aaKnown RBP27.95■■■□□ 2.06
GATC-202ENST00000548171 MPRIPQ6WCQ1 1025 aa27.94■■■□□ 2.06
GATC-202ENST00000548171 SMARCC1Q92922 1105 aaPredicted RBP27.94■■■□□ 2.06
GATC-202ENST00000548171 ANKRD26Q9UPS8 1709 aa27.93■■■□□ 2.06
GATC-202ENST00000548171 MSL1Q68DK7 614 aa27.93■■■□□ 2.06
GATC-202ENST00000548171 UBR3Q6ZT12 1888 aa27.93■■■□□ 2.06
GATC-202ENST00000548171 CYP27B1O15528 508 aa27.92■■■□□ 2.06
GATC-202ENST00000548171 NCAPD2Q15021 1401 aa27.9■■■□□ 2.06
GATC-202ENST00000548171 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
GATC-202ENST00000548171 MAP2P11137 1827 aaKnown RBP27.88■■■□□ 2.05
GATC-202ENST00000548171 AK7Q96M32 723 aa27.88■■■□□ 2.05
GATC-202ENST00000548171 NKX1-1Q15270 411 aaPredicted RBP27.87■■■□□ 2.05
GATC-202ENST00000548171 SPG7Q9UQ90 795 aa27.86■■■□□ 2.05
GATC-202ENST00000548171 EMILIN1Q9Y6C2 1016 aa27.86■■■□□ 2.05
GATC-202ENST00000548171 CARD14Q9BXL6 1004 aa27.85■■■□□ 2.05
GATC-202ENST00000548171 PIGBQ92521 554 aa27.83■■■□□ 2.05
GATC-202ENST00000548171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.83■■■□□ 2.05
GATC-202ENST00000548171 ATP10DQ9P241 1426 aa27.83■■■□□ 2.05
GATC-202ENST00000548171 WASHC2AQ641Q2 1341 aa27.82■■■□□ 2.04
GATC-202ENST00000548171 PPM1GO15355 546 aaPredicted RBP27.81■■■□□ 2.04
GATC-202ENST00000548171 SSFA2P28290 1259 aa27.81■■■□□ 2.04
GATC-202ENST00000548171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.8■■■□□ 2.04
GATC-202ENST00000548171 LOC102724428A0A0B4J2F2 783 aa27.78■■■□□ 2.04
GATC-202ENST00000548171 PHF14O94880 888 aa27.78■■■□□ 2.04
GATC-202ENST00000548171 SIK1P57059 783 aa27.78■■■□□ 2.04
GATC-202ENST00000548171 AMIGO3Q86WK7 504 aa27.78■■■□□ 2.04
GATC-202ENST00000548171 TMOD3Q9NYL9 352 aa27.78■■■□□ 2.04
GATC-202ENST00000548171 ADCY9O60503 1353 aa27.76■■■□□ 2.03
GATC-202ENST00000548171 PLEKHG2Q9H7P9 1386 aa27.76■■■□□ 2.03
GATC-202ENST00000548171 GPBP1L1Q9HC44 474 aaPredicted RBP27.76■■■□□ 2.03
GATC-202ENST00000548171 IGSF1Q8N6C5 1336 aa27.75■■■□□ 2.03
GATC-202ENST00000548171 EYA1Q99502 592 aa27.75■■■□□ 2.03
GATC-202ENST00000548171 IFNL2Q8IZJ0 200 aa27.74■■■□□ 2.03
GATC-202ENST00000548171 LINC00116Q8NCU8 138 aa27.74■■■□□ 2.03
GATC-202ENST00000548171 ZNF831Q5JPB2 1677 aa27.72■■■□□ 2.03
GATC-202ENST00000548171 PHKG2P15735 406 aa27.71■■■□□ 2.03
GATC-202ENST00000548171 ASAP1Q9ULH1 1129 aa27.71■■■□□ 2.03
GATC-202ENST00000548171 TIMELESSQ9UNS1 1208 aa27.71■■■□□ 2.03
GATC-202ENST00000548171 KIF13BQ9NQT8 1826 aa27.71■■■□□ 2.03
GATC-202ENST00000548171 GNPATO15228 680 aa27.7■■■□□ 2.02
GATC-202ENST00000548171 ATP6V1AP38606 617 aa27.7■■■□□ 2.02
GATC-202ENST00000548171 POLKQ9UBT6 870 aa27.7■■■□□ 2.02
GATC-202ENST00000548171 ITPK1Q13572 414 aa27.69■■■□□ 2.02
GATC-202ENST00000548171 SMIM5Q71RC9 77 aa27.69■■■□□ 2.02
GATC-202ENST00000548171 CICQ96RK0 1608 aaPredicted RBP27.67■■■□□ 2.02
GATC-202ENST00000548171 ATG3Q9NT62 314 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms