RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SHANK3Q9BYB0 1731 aa23.28■■□□□ 1.32
HDAC7-227ENST00000548080 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
HDAC7-227ENST00000548080 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
HDAC7-227ENST00000548080 RGPD1P0DJD0 1748 aa23.27■■□□□ 1.32
HDAC7-227ENST00000548080 IGSF1Q8N6C5 1336 aa23.27■■□□□ 1.31
HDAC7-227ENST00000548080 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
HDAC7-227ENST00000548080 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
HDAC7-227ENST00000548080 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
HDAC7-227ENST00000548080 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
HDAC7-227ENST00000548080 TRIM37O94972 964 aa23.23■■□□□ 1.31
HDAC7-227ENST00000548080 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
HDAC7-227ENST00000548080 HMOX1P09601 288 aa23.22■■□□□ 1.31
HDAC7-227ENST00000548080 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
HDAC7-227ENST00000548080 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
HDAC7-227ENST00000548080 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
HDAC7-227ENST00000548080 PNISRQ8TF01 805 aaKnown RBP23.21■■□□□ 1.31
HDAC7-227ENST00000548080 CFAP53Q96M91 514 aa23.21■■□□□ 1.31
HDAC7-227ENST00000548080 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
HDAC7-227ENST00000548080 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
HDAC7-227ENST00000548080 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
HDAC7-227ENST00000548080 TNS1Q9HBL0 1735 aaKnown RBP23.2■■□□□ 1.3
HDAC7-227ENST00000548080 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
HDAC7-227ENST00000548080 ACSBG1Q96GR2 724 aa23.19■■□□□ 1.3
HDAC7-227ENST00000548080 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
HDAC7-227ENST00000548080 CYP27B1O15528 508 aa23.15■■□□□ 1.3
HDAC7-227ENST00000548080 KCNQ2O43526 872 aa23.15■■□□□ 1.3
HDAC7-227ENST00000548080 SF3B2Q13435 895 aaKnown RBP23.15■■□□□ 1.3
HDAC7-227ENST00000548080 KDRP35968 1356 aa23.15■■□□□ 1.3
HDAC7-227ENST00000548080 DOT1LQ8TEK3 1739 aa23.15■■□□□ 1.3
HDAC7-227ENST00000548080 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.29
HDAC7-227ENST00000548080 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.29
HDAC7-227ENST00000548080 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
HDAC7-227ENST00000548080 CENPBP07199 599 aaPredicted RBP23.12■■□□□ 1.29
HDAC7-227ENST00000548080 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
HDAC7-227ENST00000548080 APBA3O96018 575 aa23.11■■□□□ 1.29
HDAC7-227ENST00000548080 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
HDAC7-227ENST00000548080 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
HDAC7-227ENST00000548080 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
HDAC7-227ENST00000548080 BCL9O00512 1426 aa23.1■■□□□ 1.29
HDAC7-227ENST00000548080 EN1Q05925 392 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-227ENST00000548080 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-227ENST00000548080 NUDCQ9Y266 331 aa23.1■■□□□ 1.29
HDAC7-227ENST00000548080 TOGARAM1Q9Y4F4 1720 aa23.1■■□□□ 1.29
HDAC7-227ENST00000548080 PLEKHO1Q53GL0 409 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-227ENST00000548080 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-227ENST00000548080 PHKG2P15735 406 aa23.07■■□□□ 1.28
HDAC7-227ENST00000548080 BAG6P46379 1132 aa23.07■■□□□ 1.28
HDAC7-227ENST00000548080 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
HDAC7-227ENST00000548080 BCL11BQ9C0K0 894 aaPredicted RBP23.07■■□□□ 1.28
HDAC7-227ENST00000548080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.07■■□□□ 1.28
HDAC7-227ENST00000548080 BTAF1O14981 1849 aa23.07■■□□□ 1.28
HDAC7-227ENST00000548080 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
HDAC7-227ENST00000548080 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
HDAC7-227ENST00000548080 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
HDAC7-227ENST00000548080 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
HDAC7-227ENST00000548080 EZH2Q15910 746 aaKnown RBP23.05■■□□□ 1.28
HDAC7-227ENST00000548080 WDR43Q15061 677 aaKnown RBP eCLIP23.04■■□□□ 1.28
HDAC7-227ENST00000548080 AMOTQ4VCS5 1084 aa23.04■■□□□ 1.28
HDAC7-227ENST00000548080 ITGB4P16144 1822 aa23.03■■□□□ 1.28
HDAC7-227ENST00000548080 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
HDAC7-227ENST00000548080 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
HDAC7-227ENST00000548080 C1orf141Q5JVX7 400 aa23.01■■□□□ 1.27
HDAC7-227ENST00000548080 PLEKHG2Q9H7P9 1386 aa23■■□□□ 1.27
HDAC7-227ENST00000548080 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
HDAC7-227ENST00000548080 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
HDAC7-227ENST00000548080 CAMKK2Q96RR4 588 aa23■■□□□ 1.27
HDAC7-227ENST00000548080 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
HDAC7-227ENST00000548080 KDM6AO15550 1401 aaPredicted RBP23■■□□□ 1.27
HDAC7-227ENST00000548080 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
HDAC7-227ENST00000548080 FCHSD2O94868 740 aa22.98■■□□□ 1.27
HDAC7-227ENST00000548080 RREB1Q92766 1687 aa22.97■■□□□ 1.27
HDAC7-227ENST00000548080 AKAP4Q5JQC9 854 aa22.96■■□□□ 1.27
HDAC7-227ENST00000548080 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
HDAC7-227ENST00000548080 PIGBQ92521 554 aa22.95■■□□□ 1.26
HDAC7-227ENST00000548080 LGR6Q9HBX8 967 aa22.95■■□□□ 1.26
HDAC7-227ENST00000548080 NUP188Q5SRE5 1749 aa22.95■■□□□ 1.26
HDAC7-227ENST00000548080 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
HDAC7-227ENST00000548080 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
HDAC7-227ENST00000548080 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
HDAC7-227ENST00000548080 PLSCR1O15162 318 aa22.93■■□□□ 1.26
HDAC7-227ENST00000548080 HSP90AB1P08238 724 aaKnown RBP22.93■■□□□ 1.26
HDAC7-227ENST00000548080 PROM2Q8N271 834 aa22.93■■□□□ 1.26
HDAC7-227ENST00000548080 TMOD3Q9NYL9 352 aa22.93■■□□□ 1.26
HDAC7-227ENST00000548080 KCNQ4P56696 695 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 ZBED9Q6R2W3 1325 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 CCDC146Q8IYE0 955 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
HDAC7-227ENST00000548080 RNMTO43148 476 aaKnown RBP22.91■■□□□ 1.26
HDAC7-227ENST00000548080 TXNRD1Q16881 649 aa22.91■■□□□ 1.26
HDAC7-227ENST00000548080 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
HDAC7-227ENST00000548080 CABP4P57796 275 aa22.9■■□□□ 1.26
HDAC7-227ENST00000548080 GNAT3A8MTJ3 354 aa22.89■■□□□ 1.25
HDAC7-227ENST00000548080 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.25
HDAC7-227ENST00000548080 LY75O60449 1722 aa22.89■■□□□ 1.25
HDAC7-227ENST00000548080 ERVV-2B6SEH9 535 aa22.88■■□□□ 1.25
HDAC7-227ENST00000548080 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
HDAC7-227ENST00000548080 ADAMTS7Q9UKP4 1686 aa22.88■■□□□ 1.25
HDAC7-227ENST00000548080 PALLDQ8WX93 1383 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms