RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
RAB5B-203ENST00000546810 KCNQ4P56696 695 aa18.6■□□□□ 0.57
RAB5B-203ENST00000546810 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
RAB5B-203ENST00000546810 ADCY9O60503 1353 aa18.57■□□□□ 0.56
RAB5B-203ENST00000546810 MSH5O43196 834 aa18.57■□□□□ 0.56
RAB5B-203ENST00000546810 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
RAB5B-203ENST00000546810 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
RAB5B-203ENST00000546810 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
RAB5B-203ENST00000546810 KAT6BQ8WYB5 2073 aa18.55■□□□□ 0.56
RAB5B-203ENST00000546810 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
RAB5B-203ENST00000546810 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
RAB5B-203ENST00000546810 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
RAB5B-203ENST00000546810 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
RAB5B-203ENST00000546810 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
RAB5B-203ENST00000546810 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
RAB5B-203ENST00000546810 CD2APQ9Y5K6 639 aa18.53■□□□□ 0.56
RAB5B-203ENST00000546810 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
RAB5B-203ENST00000546810 USP31Q70CQ4 1352 aa18.52■□□□□ 0.55
RAB5B-203ENST00000546810 ANKRD36BQ8N2N9 1353 aa18.52■□□□□ 0.55
RAB5B-203ENST00000546810 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
RAB5B-203ENST00000546810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAB5B-203ENST00000546810 TERF2IPQ9NYB0 399 aa18.51■□□□□ 0.55
RAB5B-203ENST00000546810 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
RAB5B-203ENST00000546810 KIF3CO14782 793 aa18.49■□□□□ 0.55
RAB5B-203ENST00000546810 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
RAB5B-203ENST00000546810 NSD2O96028 1365 aa18.49■□□□□ 0.55
RAB5B-203ENST00000546810 APLP1P51693 650 aa18.48■□□□□ 0.55
RAB5B-203ENST00000546810 NME9Q86XW9 330 aa18.48■□□□□ 0.55
RAB5B-203ENST00000546810 LY75O60449 1722 aa18.48■□□□□ 0.55
RAB5B-203ENST00000546810 LTN1O94822 1766 aa18.45■□□□□ 0.54
RAB5B-203ENST00000546810 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
RAB5B-203ENST00000546810 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
RAB5B-203ENST00000546810 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
RAB5B-203ENST00000546810 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
RAB5B-203ENST00000546810 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
RAB5B-203ENST00000546810 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
RAB5B-203ENST00000546810 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
RAB5B-203ENST00000546810 IGSF1Q8N6C5 1336 aa18.43■□□□□ 0.54
RAB5B-203ENST00000546810 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
RAB5B-203ENST00000546810 IP6K1Q92551 441 aa18.42■□□□□ 0.54
RAB5B-203ENST00000546810 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
RAB5B-203ENST00000546810 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
RAB5B-203ENST00000546810 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
RAB5B-203ENST00000546810 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.54
RAB5B-203ENST00000546810 TOMM70O94826 608 aa18.39■□□□□ 0.53
RAB5B-203ENST00000546810 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
RAB5B-203ENST00000546810 FAM208AQ9UK61 1670 aaKnown RBP18.38■□□□□ 0.53
RAB5B-203ENST00000546810 MEGF6O75095 1541 aa18.36■□□□□ 0.53
RAB5B-203ENST00000546810 C5P01031 1676 aa18.36■□□□□ 0.53
RAB5B-203ENST00000546810 CAPN15O75808 1086 aa18.35■□□□□ 0.53
RAB5B-203ENST00000546810 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
RAB5B-203ENST00000546810 PALLDQ8WX93 1383 aa18.34■□□□□ 0.53
RAB5B-203ENST00000546810 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
RAB5B-203ENST00000546810 AK7Q96M32 723 aa18.34■□□□□ 0.53
RAB5B-203ENST00000546810 HOXC9P31274 260 aa18.33■□□□□ 0.52
RAB5B-203ENST00000546810 PANK3Q9H999 370 aa18.33■□□□□ 0.52
RAB5B-203ENST00000546810 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
RAB5B-203ENST00000546810 CICQ96RK0 1608 aaPredicted RBP18.32■□□□□ 0.52
RAB5B-203ENST00000546810 PHF14O94880 888 aa18.32■□□□□ 0.52
RAB5B-203ENST00000546810 AMPHP49418 695 aa18.32■□□□□ 0.52
RAB5B-203ENST00000546810 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
RAB5B-203ENST00000546810 KLRG1Q96E93 195 aa18.31■□□□□ 0.52
RAB5B-203ENST00000546810 NSD3Q9BZ95 1437 aa18.31■□□□□ 0.52
RAB5B-203ENST00000546810 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
RAB5B-203ENST00000546810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
RAB5B-203ENST00000546810 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
RAB5B-203ENST00000546810 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
RAB5B-203ENST00000546810 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 JMYQ8N9B5 988 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 COG3Q96JB2 828 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
RAB5B-203ENST00000546810 HTRA3P83110 453 aa18.28■□□□□ 0.52
RAB5B-203ENST00000546810 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
RAB5B-203ENST00000546810 RBM46Q8TBY0 533 aaKnown RBP18.28■□□□□ 0.52
RAB5B-203ENST00000546810 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
RAB5B-203ENST00000546810 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
RAB5B-203ENST00000546810 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
RAB5B-203ENST00000546810 WDR90Q96KV7 1748 aa18.27■□□□□ 0.52
RAB5B-203ENST00000546810 SSFA2P28290 1259 aa18.27■□□□□ 0.52
RAB5B-203ENST00000546810 PRELPP51888 382 aa18.27■□□□□ 0.52
RAB5B-203ENST00000546810 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.52
RAB5B-203ENST00000546810 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
RAB5B-203ENST00000546810 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 FYB1O15117 783 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
RAB5B-203ENST00000546810 FBLN1P23142 703 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 BCS1LQ9Y276 419 aa18.26■□□□□ 0.51
RAB5B-203ENST00000546810 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
RAB5B-203ENST00000546810 C16orf71Q8IYS4 520 aaPredicted RBP18.25■□□□□ 0.51
RAB5B-203ENST00000546810 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
RAB5B-203ENST00000546810 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
RAB5B-203ENST00000546810 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
RAB5B-203ENST00000546810 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
RAB5B-203ENST00000546810 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
RAB5B-203ENST00000546810 MMP10P09238 476 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms