RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 DOT1LQ8TEK3 1739 aa17.25■□□□□ 0.35
BRF1-207ENST00000546417 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
BRF1-207ENST00000546417 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
BRF1-207ENST00000546417 APLP1P51693 650 aa17.24■□□□□ 0.35
BRF1-207ENST00000546417 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
BRF1-207ENST00000546417 NME9Q86XW9 330 aa17.23■□□□□ 0.35
BRF1-207ENST00000546417 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
BRF1-207ENST00000546417 NSD2O96028 1365 aa17.22■□□□□ 0.35
BRF1-207ENST00000546417 USP47Q96K76 1375 aa17.22■□□□□ 0.35
BRF1-207ENST00000546417 KIF3CO14782 793 aa17.21■□□□□ 0.35
BRF1-207ENST00000546417 IP6K1Q92551 441 aa17.2■□□□□ 0.34
BRF1-207ENST00000546417 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
BRF1-207ENST00000546417 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
BRF1-207ENST00000546417 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
BRF1-207ENST00000546417 C5P01031 1676 aa17.18■□□□□ 0.34
BRF1-207ENST00000546417 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
BRF1-207ENST00000546417 IGSF1Q8N6C5 1336 aa17.18■□□□□ 0.34
BRF1-207ENST00000546417 HDGFL2Q7Z4V5 671 aaPredicted RBP17.17■□□□□ 0.34
BRF1-207ENST00000546417 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
BRF1-207ENST00000546417 TOMM70O94826 608 aa17.15■□□□□ 0.34
BRF1-207ENST00000546417 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
BRF1-207ENST00000546417 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
BRF1-207ENST00000546417 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.34
BRF1-207ENST00000546417 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
BRF1-207ENST00000546417 L3MBTL2Q969R5 705 aa17.13■□□□□ 0.33
BRF1-207ENST00000546417 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
BRF1-207ENST00000546417 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
BRF1-207ENST00000546417 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
BRF1-207ENST00000546417 AK7Q96M32 723 aa17.11■□□□□ 0.33
BRF1-207ENST00000546417 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
BRF1-207ENST00000546417 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
BRF1-207ENST00000546417 MEGF6O75095 1541 aa17.11■□□□□ 0.33
BRF1-207ENST00000546417 HOXC9P31274 260 aa17.1■□□□□ 0.33
BRF1-207ENST00000546417 AMPHP49418 695 aa17.1■□□□□ 0.33
BRF1-207ENST00000546417 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
BRF1-207ENST00000546417 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
BRF1-207ENST00000546417 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
BRF1-207ENST00000546417 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
BRF1-207ENST00000546417 WDR90Q96KV7 1748 aa17.08■□□□□ 0.32
BRF1-207ENST00000546417 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
BRF1-207ENST00000546417 COL13A1Q5TAT6 717 aaPredicted RBP17.08■□□□□ 0.32
BRF1-207ENST00000546417 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
BRF1-207ENST00000546417 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
BRF1-207ENST00000546417 PHF14O94880 888 aa17.07■□□□□ 0.32
BRF1-207ENST00000546417 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
BRF1-207ENST00000546417 COG3Q96JB2 828 aa17.07■□□□□ 0.32
BRF1-207ENST00000546417 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
BRF1-207ENST00000546417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
BRF1-207ENST00000546417 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
BRF1-207ENST00000546417 KLRG1Q96E93 195 aa17.06■□□□□ 0.32
BRF1-207ENST00000546417 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
BRF1-207ENST00000546417 CAPN15O75808 1086 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 SSFA2P28290 1259 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
BRF1-207ENST00000546417 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
BRF1-207ENST00000546417 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
BRF1-207ENST00000546417 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
BRF1-207ENST00000546417 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
BRF1-207ENST00000546417 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
BRF1-207ENST00000546417 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
BRF1-207ENST00000546417 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
BRF1-207ENST00000546417 ITGB4P16144 1822 aa17.03■□□□□ 0.32
BRF1-207ENST00000546417 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
BRF1-207ENST00000546417 PRELPP51888 382 aa17.02■□□□□ 0.32
BRF1-207ENST00000546417 TGFB2P61812 414 aa17.02■□□□□ 0.32
BRF1-207ENST00000546417 PUS7Q96PZ0 661 aaKnown RBP17.02■□□□□ 0.32
BRF1-207ENST00000546417 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
BRF1-207ENST00000546417 SMG6Q86US8 1419 aaKnown RBP17.02■□□□□ 0.31
BRF1-207ENST00000546417 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 FBLN1P23142 703 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 FSTL1Q12841 308 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 ARHGAP27Q6ZUM4 889 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 SMIM5Q71RC9 77 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
BRF1-207ENST00000546417 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
BRF1-207ENST00000546417 MMP10P09238 476 aa16.99■□□□□ 0.31
BRF1-207ENST00000546417 HTRA3P83110 453 aa16.99■□□□□ 0.31
BRF1-207ENST00000546417 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
BRF1-207ENST00000546417 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
BRF1-207ENST00000546417 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 A0A0G2JLW4 131 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 GNPATO15228 680 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 CYP27B1O15528 508 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 SIK1P57059 783 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
BRF1-207ENST00000546417 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 PIGBQ92521 554 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
BRF1-207ENST00000546417 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
BRF1-207ENST00000546417 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.3
BRF1-207ENST00000546417 FCHSD2O94868 740 aa16.95■□□□□ 0.3
BRF1-207ENST00000546417 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
BRF1-207ENST00000546417 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
BRF1-207ENST00000546417 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
BRF1-207ENST00000546417 C9orf131Q5VYM1 1079 aa16.94■□□□□ 0.3
BRF1-207ENST00000546417 INSRP06213 1382 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms