RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ARXQ96QS3 562 aa19.03■□□□□ 0.64
CNN3-207ENST00000545882 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
CNN3-207ENST00000545882 PTPRUQ92729 1446 aa19.02■□□□□ 0.63
CNN3-207ENST00000545882 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.63
CNN3-207ENST00000545882 OVOS2A0A0J9YW53 1432 aa19.01■□□□□ 0.63
CNN3-207ENST00000545882 OVOS2Q6IE36 1432 aa19.01■□□□□ 0.63
CNN3-207ENST00000545882 CHL1O00533 1208 aa19.01■□□□□ 0.63
CNN3-207ENST00000545882 C16orf71Q8IYS4 520 aaPredicted RBP19.01■□□□□ 0.63
CNN3-207ENST00000545882 K7ELQ4 463 aaPredicted RBP19■□□□□ 0.63
CNN3-207ENST00000545882 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
CNN3-207ENST00000545882 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
CNN3-207ENST00000545882 FMN2Q9NZ56 1722 aa18.99■□□□□ 0.63
CNN3-207ENST00000545882 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
CNN3-207ENST00000545882 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
CNN3-207ENST00000545882 FER1L4A9Z1Z3 1794 aa18.99■□□□□ 0.63
CNN3-207ENST00000545882 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
CNN3-207ENST00000545882 MCM10Q7L590 875 aa18.98■□□□□ 0.63
CNN3-207ENST00000545882 GAS2L2Q8NHY3 880 aa18.98■□□□□ 0.63
CNN3-207ENST00000545882 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
CNN3-207ENST00000545882 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
CNN3-207ENST00000545882 MSH6P52701 1360 aa18.97■□□□□ 0.63
CNN3-207ENST00000545882 CRB1P82279 1406 aa18.97■□□□□ 0.63
CNN3-207ENST00000545882 CEP85Q6P2H3 762 aa18.97■□□□□ 0.63
CNN3-207ENST00000545882 ACEP12821 1306 aa18.97■□□□□ 0.63
CNN3-207ENST00000545882 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
CNN3-207ENST00000545882 USP6P35125 1406 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 MRE11P49959 708 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 DIP2AQ14689 1571 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 CEBPAP49715 358 aaPredicted RBP18.96■□□□□ 0.63
CNN3-207ENST00000545882 HSP90AB2PQ58FF8 381 aa18.96■□□□□ 0.63
CNN3-207ENST00000545882 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
CNN3-207ENST00000545882 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
CNN3-207ENST00000545882 GRPEL1Q9HAV7 217 aa18.94■□□□□ 0.62
CNN3-207ENST00000545882 USP31Q70CQ4 1352 aa18.94■□□□□ 0.62
CNN3-207ENST00000545882 MEIS3Q99687 375 aa18.94■□□□□ 0.62
CNN3-207ENST00000545882 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
CNN3-207ENST00000545882 PTPRCP08575 1304 aa18.94■□□□□ 0.62
CNN3-207ENST00000545882 XRN1Q8IZH2 1706 aaKnown RBP18.93■□□□□ 0.62
CNN3-207ENST00000545882 SSFA2P28290 1259 aa18.93■□□□□ 0.62
CNN3-207ENST00000545882 GAS2L3Q86XJ1 694 aa18.93■□□□□ 0.62
CNN3-207ENST00000545882 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
CNN3-207ENST00000545882 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
CNN3-207ENST00000545882 HSP90AA1P07900 732 aaKnown RBP18.92■□□□□ 0.62
CNN3-207ENST00000545882 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
CNN3-207ENST00000545882 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
CNN3-207ENST00000545882 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
CNN3-207ENST00000545882 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
CNN3-207ENST00000545882 SDSP20132 328 aa18.91■□□□□ 0.62
CNN3-207ENST00000545882 RABEP1Q15276 862 aa18.91■□□□□ 0.62
CNN3-207ENST00000545882 SLC26A8Q96RN1 970 aa18.91■□□□□ 0.62
CNN3-207ENST00000545882 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
CNN3-207ENST00000545882 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
CNN3-207ENST00000545882 NUTM2FA1L443 756 aa18.9■□□□□ 0.62
CNN3-207ENST00000545882 MIS18AQ9NYP9 233 aa18.9■□□□□ 0.62
CNN3-207ENST00000545882 FOXO3O43524 673 aa18.9■□□□□ 0.62
CNN3-207ENST00000545882 SKOR2Q2VWA4 1001 aaPredicted RBP18.9■□□□□ 0.62
CNN3-207ENST00000545882 MAP3K19Q56UN5 1328 aa18.89■□□□□ 0.61
CNN3-207ENST00000545882 G2E3Q7L622 706 aa18.89■□□□□ 0.61
CNN3-207ENST00000545882 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
CNN3-207ENST00000545882 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
CNN3-207ENST00000545882 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
CNN3-207ENST00000545882 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
CNN3-207ENST00000545882 APBB1O00213 710 aa18.87■□□□□ 0.61
CNN3-207ENST00000545882 PTMSP20962 102 aa18.87■□□□□ 0.61
CNN3-207ENST00000545882 MTHFSDQ2M296 383 aaKnown RBP18.87■□□□□ 0.61
CNN3-207ENST00000545882 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
CNN3-207ENST00000545882 FAM208AQ9UK61 1670 aaKnown RBP18.86■□□□□ 0.61
CNN3-207ENST00000545882 CEP170BQ9Y4F5 1589 aaPredicted RBP18.86■□□□□ 0.61
CNN3-207ENST00000545882 LRRC37A3O60309 1634 aa18.85■□□□□ 0.61
CNN3-207ENST00000545882 F6X3S4 739 aa18.85■□□□□ 0.61
CNN3-207ENST00000545882 SOX12O15370 315 aa18.85■□□□□ 0.61
CNN3-207ENST00000545882 KDRP35968 1356 aa18.85■□□□□ 0.61
CNN3-207ENST00000545882 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
CNN3-207ENST00000545882 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
CNN3-207ENST00000545882 PIK3C2AO00443 1686 aa18.84■□□□□ 0.61
CNN3-207ENST00000545882 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
CNN3-207ENST00000545882 CLCN1P35523 988 aa18.84■□□□□ 0.61
CNN3-207ENST00000545882 THEMISQ8N1K5 641 aaPredicted RBP18.84■□□□□ 0.61
CNN3-207ENST00000545882 N4BP2Q86UW6 1770 aaPredicted RBP18.84■□□□□ 0.61
CNN3-207ENST00000545882 OSBPL3Q9H4L5 887 aa18.83■□□□□ 0.6
CNN3-207ENST00000545882 MARF1Q9Y4F3 1742 aaKnown RBP18.83■□□□□ 0.6
CNN3-207ENST00000545882 SBNO1A3KN83 1393 aa18.82■□□□□ 0.6
CNN3-207ENST00000545882 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
CNN3-207ENST00000545882 USP54Q70EL1 1684 aa18.82■□□□□ 0.6
CNN3-207ENST00000545882 FLT4P35916 1363 aa18.81■□□□□ 0.6
CNN3-207ENST00000545882 CCT4P50991 539 aaKnown RBP18.81■□□□□ 0.6
CNN3-207ENST00000545882 PDE1AP54750 535 aa18.81■□□□□ 0.6
CNN3-207ENST00000545882 EYA1Q99502 592 aa18.81■□□□□ 0.6
CNN3-207ENST00000545882 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
CNN3-207ENST00000545882 PKP1Q13835 747 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 KLHL40Q2TBA0 621 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 SALL3Q9BXA9 1300 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 HMMRO75330 724 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 ERBB4Q15303 1308 aa18.8■□□□□ 0.6
CNN3-207ENST00000545882 NUCB2P80303 420 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms