RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TTC21AQ8NDW8 1320 aa9.21□□□□□ -0.94
CDCA3-209ENST00000544610 PTF1AQ7RTS3 328 aa9.2□□□□□ -0.94
CDCA3-209ENST00000544610 MARCH10Q8NA82 808 aaPredicted RBP9.2□□□□□ -0.94
CDCA3-209ENST00000544610 CARD10Q9BWT7 1032 aa9.2□□□□□ -0.94
CDCA3-209ENST00000544610 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
CDCA3-209ENST00000544610 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
CDCA3-209ENST00000544610 MON2Q7Z3U7 1717 aa9.19□□□□□ -0.94
CDCA3-209ENST00000544610 UTRNP46939 3433 aa9.19□□□□□ -0.94
CDCA3-209ENST00000544610 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
CDCA3-209ENST00000544610 PPP1R1BQ9UD71 204 aaPredicted RBP9.19□□□□□ -0.94
CDCA3-209ENST00000544610 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
CDCA3-209ENST00000544610 TNS2Q63HR2 1409 aa9.19□□□□□ -0.94
CDCA3-209ENST00000544610 YY1P25490 414 aa9.18□□□□□ -0.94
CDCA3-209ENST00000544610 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDCA3-209ENST00000544610 KTN1Q86UP2 1357 aaKnown RBP9.18□□□□□ -0.94
CDCA3-209ENST00000544610 SBNO2Q9Y2G9 1366 aa9.18□□□□□ -0.94
CDCA3-209ENST00000544610 RGPD5Q99666 1765 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 NHSQ6T4R5 1651 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 USP31Q70CQ4 1352 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-209ENST00000544610 SOX12O15370 315 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 CSB-PGBD3P0DP91 1061 aa9.17□□□□□ -0.94
CDCA3-209ENST00000544610 MYOM1P52179 1685 aa9.16□□□□□ -0.94
CDCA3-209ENST00000544610 ERBB3P21860 1342 aa9.16□□□□□ -0.94
CDCA3-209ENST00000544610 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
CDCA3-209ENST00000544610 PDGFDQ9GZP0 370 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-209ENST00000544610 EXOC5O00471 708 aa9.15□□□□□ -0.94
CDCA3-209ENST00000544610 PTGER2P43116 358 aa9.15□□□□□ -0.94
CDCA3-209ENST00000544610 TXNRD1Q16881 649 aa9.15□□□□□ -0.94
CDCA3-209ENST00000544610 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CDCA3-209ENST00000544610 PAPPAQ13219 1627 aa9.15□□□□□ -0.94
CDCA3-209ENST00000544610 ZBTB7AO95365 584 aa9.14□□□□□ -0.95
CDCA3-209ENST00000544610 SLC15A2Q16348 729 aa9.14□□□□□ -0.95
CDCA3-209ENST00000544610 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-209ENST00000544610 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
CDCA3-209ENST00000544610 STK32BQ9NY57 414 aa9.14□□□□□ -0.95
CDCA3-209ENST00000544610 USP47Q96K76 1375 aa9.13□□□□□ -0.95
CDCA3-209ENST00000544610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDCA3-209ENST00000544610 KLHL34Q8N239 644 aa9.13□□□□□ -0.95
CDCA3-209ENST00000544610 LTN1O94822 1766 aa9.13□□□□□ -0.95
CDCA3-209ENST00000544610 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
CDCA3-209ENST00000544610 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-209ENST00000544610 IL2RBP14784 551 aa9.12□□□□□ -0.95
CDCA3-209ENST00000544610 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-209ENST00000544610 NME9Q86XW9 330 aa9.12□□□□□ -0.95
CDCA3-209ENST00000544610 PUS7Q96PZ0 661 aaKnown RBP9.12□□□□□ -0.95
CDCA3-209ENST00000544610 SGIP1Q9BQI5 828 aa9.12□□□□□ -0.95
CDCA3-209ENST00000544610 MTFR1LQ9H019 292 aa9.12□□□□□ -0.95
CDCA3-209ENST00000544610 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
CDCA3-209ENST00000544610 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
CDCA3-209ENST00000544610 ANKRD24Q8TF21 1146 aa9.11□□□□□ -0.95
CDCA3-209ENST00000544610 ACSBG1Q96GR2 724 aa9.11□□□□□ -0.95
CDCA3-209ENST00000544610 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
CDCA3-209ENST00000544610 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
CDCA3-209ENST00000544610 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
CDCA3-209ENST00000544610 BTAF1O14981 1849 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 CDCA8Q53HL2 280 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 SYT17Q9BSW7 474 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
CDCA3-209ENST00000544610 MAP3K5Q99683 1374 aa9.1□□□□□ -0.95
CDCA3-209ENST00000544610 HSPA5P11021 654 aaKnown RBP9.09□□□□□ -0.95
CDCA3-209ENST00000544610 SLC12A5Q9H2X9 1139 aa9.09□□□□□ -0.95
CDCA3-209ENST00000544610 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
CDCA3-209ENST00000544610 ZNF827Q17R98 1081 aa9.08□□□□□ -0.96
CDCA3-209ENST00000544610 LRRC4BQ9NT99 713 aa9.08□□□□□ -0.96
CDCA3-209ENST00000544610 QSER1Q2KHR3 1735 aa9.08□□□□□ -0.96
CDCA3-209ENST00000544610 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
CDCA3-209ENST00000544610 IP6K1Q92551 441 aa9.07□□□□□ -0.96
CDCA3-209ENST00000544610 ARXQ96QS3 562 aa9.07□□□□□ -0.96
CDCA3-209ENST00000544610 COL24A1Q17RW2 1714 aa9.06□□□□□ -0.96
CDCA3-209ENST00000544610 ST20-MTHFSA0A0A6YYL1 179 aa9.06□□□□□ -0.96
CDCA3-209ENST00000544610 SLC27A3Q5K4L6 730 aa9.06□□□□□ -0.96
CDCA3-209ENST00000544610 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
CDCA3-209ENST00000544610 TESK2Q96S53 571 aa9.06□□□□□ -0.96
CDCA3-209ENST00000544610 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
CDCA3-209ENST00000544610 DOT1LQ8TEK3 1739 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 NSD2O96028 1365 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 TMF1P82094 1093 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 DDX54Q8TDD1 881 aaKnown RBP9.05□□□□□ -0.96
CDCA3-209ENST00000544610 SLC16A10Q8TF71 515 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 MEGF6O75095 1541 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
CDCA3-209ENST00000544610 PRR29P0C7W0 189 aa9.04□□□□□ -0.96
CDCA3-209ENST00000544610 HOXC9P31274 260 aa9.04□□□□□ -0.96
CDCA3-209ENST00000544610 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-209ENST00000544610 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-209ENST00000544610 COG3Q96JB2 828 aa9.04□□□□□ -0.96
CDCA3-209ENST00000544610 LY75O60449 1722 aa9.04□□□□□ -0.96
CDCA3-209ENST00000544610 TUBGCP6Q96RT7 1819 aa9.03□□□□□ -0.96
CDCA3-209ENST00000544610 ZNF579Q8NAF0 562 aaKnown RBP9.03□□□□□ -0.96
CDCA3-209ENST00000544610 LTV1Q96GA3 475 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-209ENST00000544610 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
CDCA3-209ENST00000544610 AMPHP49418 695 aa9.02□□□□□ -0.97
CDCA3-209ENST00000544610 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms