RNA–Protein interactions for RNA: ENST00000544280.6

CALM1-203, Transcript of calmodulin 1, humanhuman

TSL 1 (best) BASIC

Gene CALM1, Length 1,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-203ENST00000544280 USP47Q96K76 1375 aa31.5■■■□□ 2.63
CALM1-203ENST00000544280 SLC27A3Q5K4L6 730 aa31.49■■■□□ 2.63
CALM1-203ENST00000544280 USHBP1Q8N6Y0 703 aa31.49■■■□□ 2.63
CALM1-203ENST00000544280 ZCRB1Q8TBF4 217 aaKnown RBP31.49■■■□□ 2.63
CALM1-203ENST00000544280 QSER1Q2KHR3 1735 aa31.49■■■□□ 2.63
CALM1-203ENST00000544280 RTL1A6NKG5 1358 aa31.48■■■□□ 2.63
CALM1-203ENST00000544280 SLC24A1O60721 1099 aa31.48■■■□□ 2.63
CALM1-203ENST00000544280 NBPF6Q5VWK0 638 aa31.48■■■□□ 2.63
CALM1-203ENST00000544280 NBPF4Q96M43 638 aa31.48■■■□□ 2.63
CALM1-203ENST00000544280 PNPLA7Q6ZV29 1317 aa31.48■■■□□ 2.63
CALM1-203ENST00000544280 LY75O60449 1722 aa31.47■■■□□ 2.63
CALM1-203ENST00000544280 TMF1P82094 1093 aa31.47■■■□□ 2.63
CALM1-203ENST00000544280 KIF20BQ96Q89 1820 aa31.43■■■□□ 2.62
CALM1-203ENST00000544280 MAP3K5Q99683 1374 aa31.43■■■□□ 2.62
CALM1-203ENST00000544280 TFCP2L1Q9NZI6 479 aa31.41■■■□□ 2.62
CALM1-203ENST00000544280 COL24A1Q17RW2 1714 aa31.41■■■□□ 2.62
CALM1-203ENST00000544280 HSP90AB2PQ58FF8 381 aa31.4■■■□□ 2.62
CALM1-203ENST00000544280 KLHL34Q8N239 644 aa31.4■■■□□ 2.62
CALM1-203ENST00000544280 ZNF784Q8NCA9 323 aaPredicted RBP31.4■■■□□ 2.62
CALM1-203ENST00000544280 SLC16A10Q8TF71 515 aa31.39■■■□□ 2.62
CALM1-203ENST00000544280 SMG6Q86US8 1419 aaKnown RBP31.39■■■□□ 2.62
CALM1-203ENST00000544280 CCNL1Q9UK58 526 aaPredicted RBP31.38■■■□□ 2.61
CALM1-203ENST00000544280 RAPGEF4Q8WZA2 1011 aa31.37■■■□□ 2.61
CALM1-203ENST00000544280 CHD4Q14839 1912 aa31.37■■■□□ 2.61
CALM1-203ENST00000544280 UTRNP46939 3433 aa31.36■■■□□ 2.61
CALM1-203ENST00000544280 INSRP06213 1382 aa31.36■■■□□ 2.61
CALM1-203ENST00000544280 CGNL1Q0VF96 1302 aa31.34■■■□□ 2.61
CALM1-203ENST00000544280 TATP17735 454 aaPredicted RBP31.34■■■□□ 2.61
CALM1-203ENST00000544280 POLD1P28340 1107 aa31.34■■■□□ 2.61
CALM1-203ENST00000544280 CARD14Q9BXL6 1004 aa31.34■■■□□ 2.61
CALM1-203ENST00000544280 FLT4P35916 1363 aa31.33■■■□□ 2.61
CALM1-203ENST00000544280 TRIM26Q12899 539 aaPredicted RBP31.32■■■□□ 2.6
CALM1-203ENST00000544280 EMILIN1Q9Y6C2 1016 aa31.31■■■□□ 2.6
CALM1-203ENST00000544280 NSD3Q9BZ95 1437 aa31.31■■■□□ 2.6
CALM1-203ENST00000544280 GPR162Q16538 588 aa31.3■■■□□ 2.6
CALM1-203ENST00000544280 CDCA8Q53HL2 280 aa31.29■■■□□ 2.6
CALM1-203ENST00000544280 COL23A1Q86Y22 540 aaPredicted RBP31.29■■■□□ 2.6
CALM1-203ENST00000544280 NLGN2Q8NFZ4 835 aa31.29■■■□□ 2.6
CALM1-203ENST00000544280 PCDH11XQ9BZA7 1347 aa31.28■■■□□ 2.6
CALM1-203ENST00000544280 PCDH11YQ9BZA8 1340 aa31.28■■■□□ 2.6
CALM1-203ENST00000544280 MSH5O43196 834 aa31.28■■■□□ 2.6
CALM1-203ENST00000544280 TOGARAM1Q9Y4F4 1720 aa31.28■■■□□ 2.6
CALM1-203ENST00000544280 C5P01031 1676 aa31.28■■■□□ 2.6
CALM1-203ENST00000544280 CYP27B1O15528 508 aa31.27■■■□□ 2.6
CALM1-203ENST00000544280 PELP1Q8IZL8 1130 aaKnown RBP31.27■■■□□ 2.6
CALM1-203ENST00000544280 KIF24Q5T7B8 1368 aa31.27■■■□□ 2.6
CALM1-203ENST00000544280 MSL1Q68DK7 614 aa31.24■■■□□ 2.59
CALM1-203ENST00000544280 MPRIPQ6WCQ1 1025 aa31.24■■■□□ 2.59
CALM1-203ENST00000544280 PKD1L3Q7Z443 1732 aa31.24■■■□□ 2.59
CALM1-203ENST00000544280 PALLDQ8WX93 1383 aa31.23■■■□□ 2.59
CALM1-203ENST00000544280 ITGB4P16144 1822 aa31.23■■■□□ 2.59
CALM1-203ENST00000544280 TAF1LQ8IZX4 1826 aa31.23■■■□□ 2.59
CALM1-203ENST00000544280 PPM1GO15355 546 aaPredicted RBP31.21■■■□□ 2.59
CALM1-203ENST00000544280 ANKRD26Q9UPS8 1709 aa31.21■■■□□ 2.59
CALM1-203ENST00000544280 NCAPD2Q15021 1401 aa31.19■■■□□ 2.58
CALM1-203ENST00000544280 MAP2P11137 1827 aaKnown RBP31.16■■■□□ 2.58
CALM1-203ENST00000544280 YBX3P16989 372 aaKnown RBP eCLIP31.15■■■□□ 2.58
CALM1-203ENST00000544280 C4BP0C0L5 1744 aa31.15■■■□□ 2.58
CALM1-203ENST00000544280 AMIGO3Q86WK7 504 aa31.14■■■□□ 2.58
CALM1-203ENST00000544280 SMIM5Q71RC9 77 aa31.13■■■□□ 2.57
CALM1-203ENST00000544280 PIGBQ92521 554 aa31.13■■■□□ 2.57
CALM1-203ENST00000544280 EYA1Q99502 592 aa31.13■■■□□ 2.57
CALM1-203ENST00000544280 WASHC2AQ641Q2 1341 aa31.12■■■□□ 2.57
CALM1-203ENST00000544280 POLR3GLQ9BT43 218 aa31.11■■■□□ 2.57
CALM1-203ENST00000544280 NKX1-1Q15270 411 aaPredicted RBP31.1■■■□□ 2.57
CALM1-203ENST00000544280 SMARCC1Q92922 1105 aaPredicted RBP31.1■■■□□ 2.57
CALM1-203ENST00000544280 POLKQ9UBT6 870 aa31.09■■■□□ 2.57
CALM1-203ENST00000544280 SPG7Q9UQ90 795 aa31.09■■■□□ 2.57
CALM1-203ENST00000544280 UBR3Q6ZT12 1888 aa31.08■■■□□ 2.57
CALM1-203ENST00000544280 C1QTNF8P60827 252 aa31.08■■■□□ 2.57
CALM1-203ENST00000544280 AK7Q96M32 723 aa31.08■■■□□ 2.57
CALM1-203ENST00000544280 PHF14O94880 888 aa31.07■■■□□ 2.56
CALM1-203ENST00000544280 FLAD1Q8NFF5 587 aa31.07■■■□□ 2.56
CALM1-203ENST00000544280 TNNT2P45379 298 aaPredicted RBP31.06■■■□□ 2.56
CALM1-203ENST00000544280 GOLGB1Q14789 3259 aaKnown RBP31.06■■■□□ 2.56
CALM1-203ENST00000544280 TIMELESSQ9UNS1 1208 aa31.05■■■□□ 2.56
CALM1-203ENST00000544280 SENP3-EIF4A1A0A087X0R7 540 aa31.04■■■□□ 2.56
CALM1-203ENST00000544280 LINC00116Q8NCU8 138 aa31.03■■■□□ 2.56
CALM1-203ENST00000544280 LOC102724428A0A0B4J2F2 783 aa31.02■■■□□ 2.56
CALM1-203ENST00000544280 PHKG2P15735 406 aa31.02■■■□□ 2.56
CALM1-203ENST00000544280 SIK1P57059 783 aa31.02■■■□□ 2.56
CALM1-203ENST00000544280 EIF4A2Q14240 407 aaKnown RBP31.02■■■□□ 2.56
CALM1-203ENST00000544280 PCGF6Q9BYE7 350 aa31.02■■■□□ 2.56
CALM1-203ENST00000544280 ASAP1Q9ULH1 1129 aa31.02■■■□□ 2.56
CALM1-203ENST00000544280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.01■■■□□ 2.55
CALM1-203ENST00000544280 GRIN3BO60391 1043 aa31.01■■■□□ 2.55
CALM1-203ENST00000544280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.558e-7■■□□□ 14.3
CALM1-203ENST00000544280 TMOD3Q9NYL9 352 aa31.01■■■□□ 2.55
CALM1-203ENST00000544280 CD2APQ9Y5K6 639 aa31.01■■■□□ 2.55
CALM1-203ENST00000544280 HMGB2P26583 209 aaKnown RBP31■■■□□ 2.55
CALM1-203ENST00000544280 ITPK1Q13572 414 aa31■■■□□ 2.55
CALM1-203ENST00000544280 IFNL2Q8IZJ0 200 aa30.99■■■□□ 2.55
CALM1-203ENST00000544280 GIGYF1O75420 1035 aaPredicted RBP30.98■■■□□ 2.55
CALM1-203ENST00000544280 WWC3Q9ULE0 1092 aa30.96■■■□□ 2.55
CALM1-203ENST00000544280 SSFA2P28290 1259 aa30.95■■■□□ 2.55
CALM1-203ENST00000544280 ATG3Q9NT62 314 aa30.95■■■□□ 2.55
CALM1-203ENST00000544280 ATP6V1AP38606 617 aa30.94■■■□□ 2.54
CALM1-203ENST00000544280 CLSPNQ9HAW4 1339 aa30.94■■■□□ 2.54
CALM1-203ENST00000544280 GNPATO15228 680 aa30.93■■■□□ 2.54
CALM1-203ENST00000544280 HSPA5P11021 654 aaKnown RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms