RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KDRP35968 1356 aa18.23■□□□□ 0.51
SP140-213ENST00000543928 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
SP140-213ENST00000543928 EXOC5O00471 708 aa18.22■□□□□ 0.51
SP140-213ENST00000543928 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
SP140-213ENST00000543928 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
SP140-213ENST00000543928 PDE3BQ13370 1112 aa18.21■□□□□ 0.51
SP140-213ENST00000543928 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
SP140-213ENST00000543928 KRT27Q7Z3Y8 459 aa18.21■□□□□ 0.51
SP140-213ENST00000543928 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
SP140-213ENST00000543928 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
SP140-213ENST00000543928 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
SP140-213ENST00000543928 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
SP140-213ENST00000543928 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
SP140-213ENST00000543928 MARCH10Q8NA82 808 aaPredicted RBP18.17■□□□□ 0.5
SP140-213ENST00000543928 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
SP140-213ENST00000543928 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
SP140-213ENST00000543928 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
SP140-213ENST00000543928 FCHSD2O94868 740 aa18.16■□□□□ 0.5
SP140-213ENST00000543928 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
SP140-213ENST00000543928 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
SP140-213ENST00000543928 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
SP140-213ENST00000543928 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
SP140-213ENST00000543928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.5
SP140-213ENST00000543928 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
SP140-213ENST00000543928 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
SP140-213ENST00000543928 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
SP140-213ENST00000543928 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
SP140-213ENST00000543928 AMOTQ4VCS5 1084 aa18.14■□□□□ 0.49
SP140-213ENST00000543928 CYP27B1O15528 508 aa18.12■□□□□ 0.49
SP140-213ENST00000543928 MIER1Q8N108 512 aa18.12■□□□□ 0.49
SP140-213ENST00000543928 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
SP140-213ENST00000543928 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
SP140-213ENST00000543928 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
SP140-213ENST00000543928 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
SP140-213ENST00000543928 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
SP140-213ENST00000543928 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
SP140-213ENST00000543928 PHKG2P15735 406 aa18.1■□□□□ 0.49
SP140-213ENST00000543928 MTHFSDQ2M296 383 aaKnown RBP18.1■□□□□ 0.49
SP140-213ENST00000543928 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
SP140-213ENST00000543928 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
SP140-213ENST00000543928 NEFMP07197 916 aa18.09■□□□□ 0.49
SP140-213ENST00000543928 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
SP140-213ENST00000543928 BCL9O00512 1426 aa18.08■□□□□ 0.49
SP140-213ENST00000543928 C1orf141Q5JVX7 400 aa18.08■□□□□ 0.48
SP140-213ENST00000543928 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.48
SP140-213ENST00000543928 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
SP140-213ENST00000543928 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
SP140-213ENST00000543928 EP400Q96L91 3159 aa18.06■□□□□ 0.48
SP140-213ENST00000543928 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
SP140-213ENST00000543928 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
SP140-213ENST00000543928 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
SP140-213ENST00000543928 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
SP140-213ENST00000543928 TRIM37O94972 964 aa18.04■□□□□ 0.48
SP140-213ENST00000543928 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
SP140-213ENST00000543928 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
SP140-213ENST00000543928 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
SP140-213ENST00000543928 SBF2Q86WG5 1849 aa18.04■□□□□ 0.48
SP140-213ENST00000543928 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
SP140-213ENST00000543928 DCAF5Q96JK2 942 aa18.03■□□□□ 0.48
SP140-213ENST00000543928 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
SP140-213ENST00000543928 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
SP140-213ENST00000543928 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
SP140-213ENST00000543928 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
SP140-213ENST00000543928 KCNQ2O43526 872 aa18.02■□□□□ 0.48
SP140-213ENST00000543928 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
SP140-213ENST00000543928 SYTL4Q96C24 671 aaPredicted RBP18.02■□□□□ 0.48
SP140-213ENST00000543928 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
SP140-213ENST00000543928 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
SP140-213ENST00000543928 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
SP140-213ENST00000543928 UPF1Q92900 1129 aaKnown RBP eCLIP18.01■□□□□ 0.47
SP140-213ENST00000543928 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
SP140-213ENST00000543928 NHSQ6T4R5 1651 aa18■□□□□ 0.47
SP140-213ENST00000543928 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SP140-213ENST00000543928 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
SP140-213ENST00000543928 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
SP140-213ENST00000543928 ERVV-2B6SEH9 535 aa17.98■□□□□ 0.47
SP140-213ENST00000543928 RNMTO43148 476 aaKnown RBP17.98■□□□□ 0.47
SP140-213ENST00000543928 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
SP140-213ENST00000543928 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
SP140-213ENST00000543928 SCN11AQ9UI33 1791 aa17.98■□□□□ 0.47
SP140-213ENST00000543928 DLG5Q8TDM6 1919 aa17.98■□□□□ 0.47
SP140-213ENST00000543928 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
SP140-213ENST00000543928 APAF1O14727 1248 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 RIPK4P57078 832 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
SP140-213ENST00000543928 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 ITGB4P16144 1822 aa17.97■□□□□ 0.47
SP140-213ENST00000543928 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
SP140-213ENST00000543928 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
SP140-213ENST00000543928 HTATSF1O43719 755 aaKnown RBP17.96■□□□□ 0.47
SP140-213ENST00000543928 APBA3O96018 575 aa17.96■□□□□ 0.47
SP140-213ENST00000543928 CABP4P57796 275 aa17.96■□□□□ 0.47
SP140-213ENST00000543928 SOCS7O14512 581 aa17.95■□□□□ 0.46
SP140-213ENST00000543928 DCTN1Q14203 1278 aa17.95■□□□□ 0.46
SP140-213ENST00000543928 MCM10Q7L590 875 aa17.95■□□□□ 0.46
SP140-213ENST00000543928 PIGBQ92521 554 aa17.95■□□□□ 0.46
SP140-213ENST00000543928 BTAF1O14981 1849 aa17.95■□□□□ 0.46
SP140-213ENST00000543928 CEMIPQ8WUJ3 1361 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms