RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ZFYVE9O95405 1425 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 MPNDQ8N594 471 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 LMBRD1Q9NUN5 540 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 NOL7Q9UMY1 257 aaKnown RBP6.52□□□□□ -1.37
KDM3B-209ENST00000542866 METP08581 1390 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 ABCC11Q96J66 1382 aa6.52□□□□□ -1.37
KDM3B-209ENST00000542866 SYCE3A1L190 88 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 ZNF445P59923 1031 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 PIP4K2BP78356 416 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 RABEP1Q15276 862 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 KIF1BO60333 1816 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 ZBTB7BO15156 539 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 ZGPATQ8N5A5 531 aaKnown RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 COG3Q96JB2 828 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 PLEKHF1Q96S99 279 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 MAP7D2Q96T17 732 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 THUMPD2Q9BTF0 503 aaKnown RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 PRDM10Q9NQV6 1147 aa6.51□□□□□ -1.37
KDM3B-209ENST00000542866 SETD1BQ9UPS6 1966 aaKnown RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 CHMP4BQ9H444 224 aaKnown RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 NAP1L2Q9ULW6 460 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-209ENST00000542866 FOXD4L6Q3SYB3 417 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 FOXD4L3Q6VB84 417 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 PREX1Q8TCU6 1659 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 CEP170BQ9Y4F5 1589 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 DIAPH1O60610 1272 aaKnown RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 ALDH1L2Q3SY69 923 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 C16orf71Q8IYS4 520 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 PHF8Q9UPP1 1060 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 ZKSCAN5Q9Y2L8 839 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 PPIP5K1Q6PFW1 1433 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 SHPRHQ149N8 1683 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 PIK3R4Q99570 1358 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 FOXO3O43524 673 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 ST18O60284 1047 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 ZNF500O60304 480 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 TOM1O60784 492 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 GSPT1P15170 499 aaKnown RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 TERF1P54274 439 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 HS1BP3Q53T59 392 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 GPT2Q8TD30 523 aa6.5□□□□□ -1.37
KDM3B-209ENST00000542866 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.5□□□□□ -1.37
KDM3B-209ENST00000542866 UBAP1LF5GYI3 381 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 NLRP6P59044 892 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 CLEC17AQ6ZS10 378 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 NOL8Q76FK4 1167 aaKnown RBP6.49□□□□□ -1.37
KDM3B-209ENST00000542866 SIRT2Q8IXJ6 389 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 TSPYL6Q8N831 410 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 SIRT1Q96EB6 747 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 CCDC39Q9UFE4 941 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 ZNF335Q9H4Z2 1342 aaPredicted RBP6.49□□□□□ -1.37
KDM3B-209ENST00000542866 SIGLEC1Q9BZZ2 1709 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 PIK3C2BO00750 1634 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 IBTKQ9P2D0 1353 aaPredicted RBP6.49□□□□□ -1.37
KDM3B-209ENST00000542866 HMOX1P09601 288 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 ABTB2Q8N961 1025 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 IL16Q14005 1332 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 FBLN1P23142 703 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 PRKAR2BP31323 418 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 CASC1Q6TDU7 716 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 PLEKHM2Q8IWE5 1019 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
KDM3B-209ENST00000542866 LMTK3Q96Q04 1460 aa6.49□□□□□ -1.37
KDM3B-209ENST00000542866 TMEM94Q12767 1356 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 AMPHP49418 695 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 INTS3Q68E01 1043 aaKnown RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 LRSAM1Q6UWE0 723 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 PDLIM2Q96JY6 352 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 USP26Q9BXU7 913 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 AK9Q5TCS8 1911 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 SBNO2Q9Y2G9 1366 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 DYNC1I1O14576 645 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 SASS6Q6UVJ0 657 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 MRPL50Q8N5N7 158 aaKnown RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 FBXO41Q8TF61 875 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 PRDM4Q9UKN5 801 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 ZHX1Q9UKY1 873 aaPredicted RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 SMARCA5O60264 1052 aaPredicted RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 VAMP4O75379 141 aa6.48□□□□□ -1.37
KDM3B-209ENST00000542866 OTUD7AQ8TE49 926 aaPredicted RBP6.48□□□□□ -1.37
KDM3B-209ENST00000542866 ROBO2Q9HCK4 1378 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 CSB-PGBD3P0DP91 1061 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 TTC22Q5TAA0 569 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 TSC1Q92574 1164 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 JARID2Q92833 1246 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-209ENST00000542866 ZNF830Q96NB3 372 aaPredicted RBP6.47□□□□□ -1.37
KDM3B-209ENST00000542866 ANKRD36BQ8N2N9 1353 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 MTERF4Q7Z6M4 381 aaKnown RBP6.47□□□□□ -1.37
KDM3B-209ENST00000542866 ZDHHC9Q9Y397 364 aa6.47□□□□□ -1.37
KDM3B-209ENST00000542866 FYB1O15117 783 aa6.46□□□□□ -1.37
KDM3B-209ENST00000542866 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.37
KDM3B-209ENST00000542866 NEK4P51957 841 aa6.46□□□□□ -1.37
KDM3B-209ENST00000542866 KIAA2012Q0VF49 1180 aa6.46□□□□□ -1.37
KDM3B-209ENST00000542866 TWISTNBQ3B726 338 aaPredicted RBP6.46□□□□□ -1.37
KDM3B-209ENST00000542866 CFAP44Q96MT7 982 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms