RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
CHFR-221ENST00000542714 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
CHFR-221ENST00000542714 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
CHFR-221ENST00000542714 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
CHFR-221ENST00000542714 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
CHFR-221ENST00000542714 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
CHFR-221ENST00000542714 MCM10Q7L590 875 aa17.29■□□□□ 0.36
CHFR-221ENST00000542714 JCADQ9P266 1359 aa17.28■□□□□ 0.36
CHFR-221ENST00000542714 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
CHFR-221ENST00000542714 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
CHFR-221ENST00000542714 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
CHFR-221ENST00000542714 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
CHFR-221ENST00000542714 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
CHFR-221ENST00000542714 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
CHFR-221ENST00000542714 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
CHFR-221ENST00000542714 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
CHFR-221ENST00000542714 BTG4Q9NY30 223 aa17.27■□□□□ 0.36
CHFR-221ENST00000542714 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
CHFR-221ENST00000542714 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
CHFR-221ENST00000542714 CARD10Q9BWT7 1032 aa17.26■□□□□ 0.35
CHFR-221ENST00000542714 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
CHFR-221ENST00000542714 LRP6O75581 1613 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
CHFR-221ENST00000542714 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
CHFR-221ENST00000542714 ADAMTS2O95450 1211 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 GNAI1P63096 354 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
CHFR-221ENST00000542714 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
CHFR-221ENST00000542714 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 SLIT2O94813 1529 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
CHFR-221ENST00000542714 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
CHFR-221ENST00000542714 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
CHFR-221ENST00000542714 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
CHFR-221ENST00000542714 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
CHFR-221ENST00000542714 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
CHFR-221ENST00000542714 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
CHFR-221ENST00000542714 HSPA1LP34931 641 aa17.23■□□□□ 0.35
CHFR-221ENST00000542714 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
CHFR-221ENST00000542714 EVA1CP58658 441 aa17.23■□□□□ 0.35
CHFR-221ENST00000542714 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
CHFR-221ENST00000542714 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
CHFR-221ENST00000542714 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
CHFR-221ENST00000542714 CHL1O00533 1208 aa17.22■□□□□ 0.35
CHFR-221ENST00000542714 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
CHFR-221ENST00000542714 FKBP8Q14318 412 aa17.22■□□□□ 0.35
CHFR-221ENST00000542714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHFR-221ENST00000542714 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
CHFR-221ENST00000542714 NEFLP07196 543 aa17.21■□□□□ 0.35
CHFR-221ENST00000542714 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
CHFR-221ENST00000542714 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
CHFR-221ENST00000542714 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
CHFR-221ENST00000542714 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
CHFR-221ENST00000542714 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
CHFR-221ENST00000542714 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
CHFR-221ENST00000542714 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
CHFR-221ENST00000542714 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
CHFR-221ENST00000542714 MRC1P22897 1456 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 CYP27B1O15528 508 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
CHFR-221ENST00000542714 BCAR3O75815 825 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 IL2RBP14784 551 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 PHKG2P15735 406 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
CHFR-221ENST00000542714 PLIN1O60240 522 aa17.17■□□□□ 0.34
CHFR-221ENST00000542714 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
CHFR-221ENST00000542714 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
CHFR-221ENST00000542714 TOGARAM1Q9Y4F4 1720 aa17.17■□□□□ 0.34
CHFR-221ENST00000542714 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
CHFR-221ENST00000542714 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
CHFR-221ENST00000542714 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
CHFR-221ENST00000542714 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
CHFR-221ENST00000542714 VAMP4O75379 141 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 KRT24Q2M2I5 525 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 USP35Q9P2H5 1018 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
CHFR-221ENST00000542714 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
CHFR-221ENST00000542714 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
CHFR-221ENST00000542714 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
CHFR-221ENST00000542714 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
CHFR-221ENST00000542714 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
CHFR-221ENST00000542714 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
CHFR-221ENST00000542714 C20orf194Q5TEA3 1177 aa17.12■□□□□ 0.33
CHFR-221ENST00000542714 C8orf37Q96NL8 207 aa17.12■□□□□ 0.33
CHFR-221ENST00000542714 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
CHFR-221ENST00000542714 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
CHFR-221ENST00000542714 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
CHFR-221ENST00000542714 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
CHFR-221ENST00000542714 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
CHFR-221ENST00000542714 ITGB4P16144 1822 aa17.1■□□□□ 0.33
CHFR-221ENST00000542714 TEFQ10587 303 aa17.1■□□□□ 0.33
CHFR-221ENST00000542714 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
CHFR-221ENST00000542714 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
CHFR-221ENST00000542714 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
CHFR-221ENST00000542714 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
CHFR-221ENST00000542714 ALDH1L2Q3SY69 923 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms