RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 PER1O15534 1290 aaPredicted RBP26.47■■□□□ 1.83
SAMD1-203ENST00000541938 TATP17735 454 aaPredicted RBP26.47■■□□□ 1.83
SAMD1-203ENST00000541938 EYA1Q99502 592 aa26.45■■□□□ 1.82
SAMD1-203ENST00000541938 EIF4A2Q14240 407 aaKnown RBP26.43■■□□□ 1.82
SAMD1-203ENST00000541938 R3HDM1Q15032 1099 aaKnown RBP26.43■■□□□ 1.82
SAMD1-203ENST00000541938 NBPF14Q5TI25 921 aa26.4■■□□□ 1.82
SAMD1-203ENST00000541938 PROM2Q8N271 834 aa26.4■■□□□ 1.82
SAMD1-203ENST00000541938 KAT6BQ8WYB5 2073 aa26.4■■□□□ 1.82
SAMD1-203ENST00000541938 CC2D1BQ5T0F9 858 aaKnown RBP26.39■■□□□ 1.82
SAMD1-203ENST00000541938 NCAPD2Q15021 1401 aa26.38■■□□□ 1.81
SAMD1-203ENST00000541938 RREB1Q92766 1687 aa26.38■■□□□ 1.81
SAMD1-203ENST00000541938 NHSQ6T4R5 1651 aa26.36■■□□□ 1.81
SAMD1-203ENST00000541938 PRIM1P49642 420 aaKnown RBP26.36■■□□□ 1.81
SAMD1-203ENST00000541938 TXNRD1Q16881 649 aa26.36■■□□□ 1.81
SAMD1-203ENST00000541938 CNGB1Q14028 1251 aaPredicted RBP26.35■■□□□ 1.81
SAMD1-203ENST00000541938 SYTL4Q96C24 671 aaPredicted RBP26.35■■□□□ 1.81
SAMD1-203ENST00000541938 NUP188Q5SRE5 1749 aa26.34■■□□□ 1.81
SAMD1-203ENST00000541938 PCDH11XQ9BZA7 1347 aa26.34■■□□□ 1.81
SAMD1-203ENST00000541938 PCDH11YQ9BZA8 1340 aa26.34■■□□□ 1.81
SAMD1-203ENST00000541938 SHANK3Q9BYB0 1731 aa26.34■■□□□ 1.81
SAMD1-203ENST00000541938 CYP27B1O15528 508 aa26.32■■□□□ 1.8
SAMD1-203ENST00000541938 RGPD3A6NKT7 1758 aaPredicted RBP26.32■■□□□ 1.8
SAMD1-203ENST00000541938 RGPD4Q7Z3J3 1758 aa26.32■■□□□ 1.8
SAMD1-203ENST00000541938 MTHFSP49914 203 aa26.31■■□□□ 1.8
SAMD1-203ENST00000541938 SPG7Q9UQ90 795 aa26.31■■□□□ 1.8
SAMD1-203ENST00000541938 IGSF1Q8N6C5 1336 aa26.31■■□□□ 1.8
SAMD1-203ENST00000541938 NPC1L1Q9UHC9 1359 aa26.3■■□□□ 1.8
SAMD1-203ENST00000541938 ANO8Q9HCE9 1232 aaPredicted RBP26.29■■□□□ 1.8
SAMD1-203ENST00000541938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.29■■□□□ 1.8
SAMD1-203ENST00000541938 BTAF1O14981 1849 aa26.28■■□□□ 1.8
SAMD1-203ENST00000541938 IL13P35225 146 aa26.27■■□□□ 1.8
SAMD1-203ENST00000541938 NKX1-1Q15270 411 aaPredicted RBP26.24■■□□□ 1.79
SAMD1-203ENST00000541938 AEBP1Q8IUX7 1158 aa26.24■■□□□ 1.79
SAMD1-203ENST00000541938 STK32BQ9NY57 414 aa26.24■■□□□ 1.79
SAMD1-203ENST00000541938 DOT1LQ8TEK3 1739 aa26.24■■□□□ 1.79
SAMD1-203ENST00000541938 PKD1L3Q7Z443 1732 aa26.23■■□□□ 1.79
SAMD1-203ENST00000541938 SULT6B1Q6IMI4 303 aa26.23■■□□□ 1.79
SAMD1-203ENST00000541938 IFNL2Q8IZJ0 200 aa26.23■■□□□ 1.79
SAMD1-203ENST00000541938 PHKG2P15735 406 aa26.22■■□□□ 1.79
SAMD1-203ENST00000541938 LRRC4BQ9NT99 713 aa26.22■■□□□ 1.79
SAMD1-203ENST00000541938 SLC15A2Q16348 729 aa26.21■■□□□ 1.79
SAMD1-203ENST00000541938 PLEKHO1Q53GL0 409 aaPredicted RBP26.21■■□□□ 1.79
SAMD1-203ENST00000541938 MPRIPQ6WCQ1 1025 aa26.21■■□□□ 1.79
SAMD1-203ENST00000541938 LRP5O75197 1615 aa26.21■■□□□ 1.79
SAMD1-203ENST00000541938 SLC27A3Q5K4L6 730 aa26.19■■□□□ 1.78
SAMD1-203ENST00000541938 PLEKHG2Q9H7P9 1386 aa26.19■■□□□ 1.78
SAMD1-203ENST00000541938 DIAPH1O60610 1272 aaKnown RBP26.18■■□□□ 1.78
SAMD1-203ENST00000541938 KCNQ4P56696 695 aa26.18■■□□□ 1.78
SAMD1-203ENST00000541938 AMOTQ4VCS5 1084 aa26.17■■□□□ 1.78
SAMD1-203ENST00000541938 ZNF530Q6P9A1 599 aaPredicted RBP26.15■■□□□ 1.78
SAMD1-203ENST00000541938 PIGBQ92521 554 aa26.15■■□□□ 1.78
SAMD1-203ENST00000541938 PDGFDQ9GZP0 370 aaPredicted RBP26.15■■□□□ 1.78
SAMD1-203ENST00000541938 HMOX1P09601 288 aa26.14■■□□□ 1.78
SAMD1-203ENST00000541938 CCNL1Q9UK58 526 aaPredicted RBP26.14■■□□□ 1.78
SAMD1-203ENST00000541938 KDRP35968 1356 aa26.14■■□□□ 1.78
SAMD1-203ENST00000541938 ZNF827Q17R98 1081 aa26.13■■□□□ 1.77
SAMD1-203ENST00000541938 TOGARAM1Q9Y4F4 1720 aa26.11■■□□□ 1.77
SAMD1-203ENST00000541938 HSP90AB1P08238 724 aaKnown RBP26.11■■□□□ 1.77
SAMD1-203ENST00000541938 AKT1S1Q96B36 256 aa26.11■■□□□ 1.77
SAMD1-203ENST00000541938 SPON1Q9HCB6 807 aa26.11■■□□□ 1.77
SAMD1-203ENST00000541938 TMOD3Q9NYL9 352 aa26.11■■□□□ 1.77
SAMD1-203ENST00000541938 PALLDQ8WX93 1383 aa26.1■■□□□ 1.77
SAMD1-203ENST00000541938 SMARCC1Q92922 1105 aaPredicted RBP26.1■■□□□ 1.77
SAMD1-203ENST00000541938 PAPPAQ13219 1627 aa26.1■■□□□ 1.77
SAMD1-203ENST00000541938 PPP2R1AP30153 589 aa26.09■■□□□ 1.77
SAMD1-203ENST00000541938 DCAF5Q96JK2 942 aa26.09■■□□□ 1.77
SAMD1-203ENST00000541938 LY75O60449 1722 aa26.08■■□□□ 1.77
SAMD1-203ENST00000541938 U2SURPO15042 1029 aaKnown RBP26.08■■□□□ 1.77
SAMD1-203ENST00000541938 ZBTB7AO95365 584 aa26.08■■□□□ 1.77
SAMD1-203ENST00000541938 C1orf141Q5JVX7 400 aa26.08■■□□□ 1.77
SAMD1-203ENST00000541938 ITGB4P16144 1822 aa26.08■■□□□ 1.77
SAMD1-203ENST00000541938 COL3A1P02461 1466 aaPredicted RBP26.07■■□□□ 1.76
SAMD1-203ENST00000541938 ERVV-2B6SEH9 535 aa26.07■■□□□ 1.76
SAMD1-203ENST00000541938 CFAP53Q96M91 514 aa26.07■■□□□ 1.76
SAMD1-203ENST00000541938 TFCP2L1Q9NZI6 479 aa26.05■■□□□ 1.76
SAMD1-203ENST00000541938 ASAP1Q9ULH1 1129 aa26.05■■□□□ 1.76
SAMD1-203ENST00000541938 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
SAMD1-203ENST00000541938 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
SAMD1-203ENST00000541938 CABP4P57796 275 aa26.03■■□□□ 1.76
SAMD1-203ENST00000541938 ATG3Q9NT62 314 aa26.03■■□□□ 1.76
SAMD1-203ENST00000541938 KDM6AO15550 1401 aaPredicted RBP26.03■■□□□ 1.76
SAMD1-203ENST00000541938 DDX10Q13206 875 aaKnown RBP26.02■■□□□ 1.76
SAMD1-203ENST00000541938 AKAP4Q5JQC9 854 aa26.02■■□□□ 1.76
SAMD1-203ENST00000541938 ZEB1P37275 1124 aaPredicted RBP26.01■■□□□ 1.75
SAMD1-203ENST00000541938 MTHFSDQ2M296 383 aaKnown RBP26.01■■□□□ 1.75
SAMD1-203ENST00000541938 PNPLA7Q6ZV29 1317 aa26■■□□□ 1.75
SAMD1-203ENST00000541938 LOC102724428A0A0B4J2F2 783 aa26■■□□□ 1.75
SAMD1-203ENST00000541938 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
SAMD1-203ENST00000541938 SIK1P57059 783 aa26■■□□□ 1.75
SAMD1-203ENST00000541938 MTFR1LQ9H019 292 aa26■■□□□ 1.75
SAMD1-203ENST00000541938 PPP1R1BQ9UD71 204 aaPredicted RBP26■■□□□ 1.75
SAMD1-203ENST00000541938 NUDCQ9Y266 331 aa26■■□□□ 1.75
SAMD1-203ENST00000541938 PTGER2P43116 358 aa25.97■■□□□ 1.75
SAMD1-203ENST00000541938 NFATC2IPQ8NCF5 419 aa25.97■■□□□ 1.75
SAMD1-203ENST00000541938 ATP6V1AP38606 617 aa25.96■■□□□ 1.75
SAMD1-203ENST00000541938 LGR6Q9HBX8 967 aa25.96■■□□□ 1.75
SAMD1-203ENST00000541938 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
SAMD1-203ENST00000541938 RNMTO43148 476 aaKnown RBP25.94■■□□□ 1.74
SAMD1-203ENST00000541938 U2AF1L5P0DN76 240 aaPredicted RBP25.94■■□□□ 1.74
SAMD1-203ENST00000541938 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms