RNA–Protein interactions for RNA: ENST00000540945.1

DNAJC4-208, Transcript of DnaJ heat shock protein family (Hsp40) member C4, humanhuman

TSL 2

Gene DNAJC4, Length 703 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC4-208ENST00000540945 DOT1LQ8TEK3 1739 aa25.68■■□□□ 1.7
DNAJC4-208ENST00000540945 C1QTNF8P60827 252 aa25.67■■□□□ 1.7
DNAJC4-208ENST00000540945 ZCRB1Q8TBF4 217 aaKnown RBP25.67■■□□□ 1.7
DNAJC4-208ENST00000540945 COL24A1Q17RW2 1714 aa25.66■■□□□ 1.7
DNAJC4-208ENST00000540945 PELP1Q8IZL8 1130 aaKnown RBP25.66■■□□□ 1.7
DNAJC4-208ENST00000540945 SENP3-EIF4A1A0A087X0R7 540 aa25.65■■□□□ 1.7
DNAJC4-208ENST00000540945 NSD2O96028 1365 aa25.65■■□□□ 1.7
DNAJC4-208ENST00000540945 LY75O60449 1722 aa25.65■■□□□ 1.7
DNAJC4-208ENST00000540945 TUBGCP6Q96RT7 1819 aa25.65■■□□□ 1.7
DNAJC4-208ENST00000540945 FBLN1P23142 703 aa25.64■■□□□ 1.7
DNAJC4-208ENST00000540945 TESK2Q96S53 571 aa25.64■■□□□ 1.7
DNAJC4-208ENST00000540945 MEGF6O75095 1541 aa25.63■■□□□ 1.69
DNAJC4-208ENST00000540945 CCNL1Q9UK58 526 aaPredicted RBP25.63■■□□□ 1.69
DNAJC4-208ENST00000540945 SHANK3Q9BYB0 1731 aa25.63■■□□□ 1.69
DNAJC4-208ENST00000540945 RGPD2P0DJD1 1756 aa25.62■■□□□ 1.69
DNAJC4-208ENST00000540945 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
DNAJC4-208ENST00000540945 SLC24A1O60721 1099 aa25.62■■□□□ 1.69
DNAJC4-208ENST00000540945 RTL1A6NKG5 1358 aa25.61■■□□□ 1.69
DNAJC4-208ENST00000540945 USP47Q96K76 1375 aa25.6■■□□□ 1.69
DNAJC4-208ENST00000540945 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
DNAJC4-208ENST00000540945 MSH5O43196 834 aa25.59■■□□□ 1.69
DNAJC4-208ENST00000540945 CGNL1Q0VF96 1302 aa25.59■■□□□ 1.69
DNAJC4-208ENST00000540945 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
DNAJC4-208ENST00000540945 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
DNAJC4-208ENST00000540945 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
DNAJC4-208ENST00000540945 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
DNAJC4-208ENST00000540945 RAPGEF4Q8WZA2 1011 aa25.57■■□□□ 1.68
DNAJC4-208ENST00000540945 SMG6Q86US8 1419 aaKnown RBP25.56■■□□□ 1.68
DNAJC4-208ENST00000540945 COL23A1Q86Y22 540 aaPredicted RBP25.56■■□□□ 1.68
DNAJC4-208ENST00000540945 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
DNAJC4-208ENST00000540945 GGNBP2Q9H3C7 697 aa25.54■■□□□ 1.68
DNAJC4-208ENST00000540945 FYB1O15117 783 aa25.53■■□□□ 1.68
DNAJC4-208ENST00000540945 GRIN3BO60391 1043 aa25.53■■□□□ 1.68
DNAJC4-208ENST00000540945 TATP17735 454 aaPredicted RBP25.52■■□□□ 1.68
DNAJC4-208ENST00000540945 HMGB2P26583 209 aaKnown RBP25.52■■□□□ 1.68
DNAJC4-208ENST00000540945 YBX3P16989 372 aaKnown RBP eCLIP25.51■■□□□ 1.67
DNAJC4-208ENST00000540945 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
DNAJC4-208ENST00000540945 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
DNAJC4-208ENST00000540945 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
DNAJC4-208ENST00000540945 C5P01031 1676 aa25.49■■□□□ 1.67
DNAJC4-208ENST00000540945 TMF1P82094 1093 aa25.49■■□□□ 1.67
DNAJC4-208ENST00000540945 INSRP06213 1382 aa25.48■■□□□ 1.67
DNAJC4-208ENST00000540945 FLAD1Q8NFF5 587 aa25.48■■□□□ 1.67
DNAJC4-208ENST00000540945 PALLDQ8WX93 1383 aa25.47■■□□□ 1.67
DNAJC4-208ENST00000540945 HSP90AB2PQ58FF8 381 aa25.47■■□□□ 1.67
DNAJC4-208ENST00000540945 FLT4P35916 1363 aa25.46■■□□□ 1.67
DNAJC4-208ENST00000540945 MPRIPQ6WCQ1 1025 aa25.46■■□□□ 1.67
DNAJC4-208ENST00000540945 CD2APQ9Y5K6 639 aa25.45■■□□□ 1.66
DNAJC4-208ENST00000540945 KIF24Q5T7B8 1368 aa25.44■■□□□ 1.66
DNAJC4-208ENST00000540945 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
DNAJC4-208ENST00000540945 SMARCC1Q92922 1105 aaPredicted RBP25.42■■□□□ 1.66
DNAJC4-208ENST00000540945 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
DNAJC4-208ENST00000540945 CYP27B1O15528 508 aa25.41■■□□□ 1.66
DNAJC4-208ENST00000540945 CDCA8Q53HL2 280 aa25.41■■□□□ 1.66
DNAJC4-208ENST00000540945 AK7Q96M32 723 aa25.4■■□□□ 1.66
DNAJC4-208ENST00000540945 C4BP0C0L5 1744 aa25.39■■□□□ 1.65
DNAJC4-208ENST00000540945 ATP10DQ9P241 1426 aa25.38■■□□□ 1.65
DNAJC4-208ENST00000540945 GOLGB1Q14789 3259 aaKnown RBP25.38■■□□□ 1.65
DNAJC4-208ENST00000540945 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
DNAJC4-208ENST00000540945 ITGB4P16144 1822 aa25.37■■□□□ 1.65
DNAJC4-208ENST00000540945 EMILIN1Q9Y6C2 1016 aa25.36■■□□□ 1.65
DNAJC4-208ENST00000540945 NSD3Q9BZ95 1437 aa25.36■■□□□ 1.65
DNAJC4-208ENST00000540945 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
DNAJC4-208ENST00000540945 PHF14O94880 888 aa25.35■■□□□ 1.65
DNAJC4-208ENST00000540945 PIGBQ92521 554 aa25.35■■□□□ 1.65
DNAJC4-208ENST00000540945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 NKX1-1Q15270 411 aaPredicted RBP25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 AMIGO3Q86WK7 504 aa25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 GPBP1L1Q9HC44 474 aaPredicted RBP25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 SPG7Q9UQ90 795 aa25.33■■□□□ 1.65
DNAJC4-208ENST00000540945 CARD14Q9BXL6 1004 aa25.32■■□□□ 1.64
DNAJC4-208ENST00000540945 UBR3Q6ZT12 1888 aa25.32■■□□□ 1.64
DNAJC4-208ENST00000540945 NCAPD2Q15021 1401 aa25.31■■□□□ 1.64
DNAJC4-208ENST00000540945 LOC102724428A0A0B4J2F2 783 aa25.3■■□□□ 1.64
DNAJC4-208ENST00000540945 SSFA2P28290 1259 aa25.3■■□□□ 1.64
DNAJC4-208ENST00000540945 SIK1P57059 783 aa25.3■■□□□ 1.64
DNAJC4-208ENST00000540945 IGSF1Q8N6C5 1336 aa25.3■■□□□ 1.64
DNAJC4-208ENST00000540945 SMIM5Q71RC9 77 aa25.29■■□□□ 1.64
DNAJC4-208ENST00000540945 ADCY9O60503 1353 aa25.29■■□□□ 1.64
DNAJC4-208ENST00000540945 LINC00116Q8NCU8 138 aa25.28■■□□□ 1.64
DNAJC4-208ENST00000540945 TMOD3Q9NYL9 352 aa25.28■■□□□ 1.64
DNAJC4-208ENST00000540945 ZNF526Q8TF50 670 aaPredicted RBP25.27■■□□□ 1.64
DNAJC4-208ENST00000540945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.27■■□□□ 1.64
DNAJC4-208ENST00000540945 WWC3Q9ULE0 1092 aa25.27■■□□□ 1.64
DNAJC4-208ENST00000540945 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
DNAJC4-208ENST00000540945 MAP2P11137 1827 aaKnown RBP25.26■■□□□ 1.63
DNAJC4-208ENST00000540945 EYA1Q99502 592 aa25.26■■□□□ 1.63
DNAJC4-208ENST00000540945 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
DNAJC4-208ENST00000540945 GNPATO15228 680 aa25.24■■□□□ 1.63
DNAJC4-208ENST00000540945 IFNL2Q8IZJ0 200 aa25.24■■□□□ 1.63
DNAJC4-208ENST00000540945 ASAP1Q9ULH1 1129 aa25.24■■□□□ 1.63
DNAJC4-208ENST00000540945 ATP6V1AP38606 617 aa25.23■■□□□ 1.63
DNAJC4-208ENST00000540945 IFFO2Q5TF58 517 aa25.23■■□□□ 1.63
DNAJC4-208ENST00000540945 PHKG2P15735 406 aa25.22■■□□□ 1.63
DNAJC4-208ENST00000540945 ITPK1Q13572 414 aa25.22■■□□□ 1.63
DNAJC4-208ENST00000540945 HSPA6P17066 643 aa25.2■■□□□ 1.62
DNAJC4-208ENST00000540945 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
DNAJC4-208ENST00000540945 POLKQ9UBT6 870 aa25.19■■□□□ 1.62
DNAJC4-208ENST00000540945 MMP10P09238 476 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms