RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-222ENST00000540781 NBPF14Q5TI25 921 aa27.26■■□□□ 1.95
RAP1B-222ENST00000540781 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
RAP1B-222ENST00000540781 NUP188Q5SRE5 1749 aa27.25■■□□□ 1.95
RAP1B-222ENST00000540781 TATP17735 454 aaPredicted RBP27.25■■□□□ 1.95
RAP1B-222ENST00000540781 RGPD3A6NKT7 1758 aaPredicted RBP27.25■■□□□ 1.95
RAP1B-222ENST00000540781 RGPD4Q7Z3J3 1758 aa27.25■■□□□ 1.95
RAP1B-222ENST00000540781 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
RAP1B-222ENST00000540781 AMER1Q5JTC6 1135 aaPredicted RBP27.2■■□□□ 1.94
RAP1B-222ENST00000540781 EYA1Q99502 592 aa27.2■■□□□ 1.94
RAP1B-222ENST00000540781 SHANK3Q9BYB0 1731 aa27.19■■□□□ 1.94
RAP1B-222ENST00000540781 PROM2Q8N271 834 aa27.19■■□□□ 1.94
RAP1B-222ENST00000540781 EIF4A2Q14240 407 aaKnown RBP27.18■■□□□ 1.94
RAP1B-222ENST00000540781 TXNRD1Q16881 649 aa27.18■■□□□ 1.94
RAP1B-222ENST00000540781 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
RAP1B-222ENST00000540781 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
RAP1B-222ENST00000540781 BTAF1O14981 1849 aa27.15■■□□□ 1.94
RAP1B-222ENST00000540781 PRIM1P49642 420 aaKnown RBP27.14■■□□□ 1.94
RAP1B-222ENST00000540781 SYTL4Q96C24 671 aaPredicted RBP27.14■■□□□ 1.94
RAP1B-222ENST00000540781 PCDH11XQ9BZA7 1347 aa27.14■■□□□ 1.93
RAP1B-222ENST00000540781 PCDH11YQ9BZA8 1340 aa27.14■■□□□ 1.93
RAP1B-222ENST00000540781 DOT1LQ8TEK3 1739 aa27.12■■□□□ 1.93
RAP1B-222ENST00000540781 ANO8Q9HCE9 1232 aaPredicted RBP27.11■■□□□ 1.93
RAP1B-222ENST00000540781 CC2D1BQ5T0F9 858 aaKnown RBP27.1■■□□□ 1.93
RAP1B-222ENST00000540781 SPG7Q9UQ90 795 aa27.1■■□□□ 1.93
RAP1B-222ENST00000540781 LRP5O75197 1615 aa27.09■■□□□ 1.93
RAP1B-222ENST00000540781 CYP27B1O15528 508 aa27.09■■□□□ 1.93
RAP1B-222ENST00000540781 PKD1L3Q7Z443 1732 aa27.07■■□□□ 1.92
RAP1B-222ENST00000540781 STK32BQ9NY57 414 aa27.07■■□□□ 1.92
RAP1B-222ENST00000540781 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
RAP1B-222ENST00000540781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.06■■□□□ 1.92
RAP1B-222ENST00000540781 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
RAP1B-222ENST00000540781 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
RAP1B-222ENST00000540781 MTHFSP49914 203 aa27.03■■□□□ 1.92
RAP1B-222ENST00000540781 SLC15A2Q16348 729 aa27.02■■□□□ 1.92
RAP1B-222ENST00000540781 NKX1-1Q15270 411 aaPredicted RBP27.01■■□□□ 1.91
RAP1B-222ENST00000540781 SLC27A3Q5K4L6 730 aa27.01■■□□□ 1.91
RAP1B-222ENST00000540781 LRRC4BQ9NT99 713 aa27.01■■□□□ 1.91
RAP1B-222ENST00000540781 IL13P35225 146 aa27■■□□□ 1.91
RAP1B-222ENST00000540781 IFNL2Q8IZJ0 200 aa27■■□□□ 1.91
RAP1B-222ENST00000540781 SRCAPQ6ZRS2 3230 aa27■■□□□ 1.91
RAP1B-222ENST00000540781 PLEKHG2Q9H7P9 1386 aa26.99■■□□□ 1.91
RAP1B-222ENST00000540781 MPRIPQ6WCQ1 1025 aa26.99■■□□□ 1.91
RAP1B-222ENST00000540781 PHKG2P15735 406 aa26.98■■□□□ 1.91
RAP1B-222ENST00000540781 AEBP1Q8IUX7 1158 aa26.98■■□□□ 1.91
RAP1B-222ENST00000540781 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
RAP1B-222ENST00000540781 SULT6B1Q6IMI4 303 aa26.96■■□□□ 1.91
RAP1B-222ENST00000540781 SPON1Q9HCB6 807 aa26.96■■□□□ 1.91
RAP1B-222ENST00000540781 PAPPAQ13219 1627 aa26.96■■□□□ 1.91
RAP1B-222ENST00000540781 TOGARAM1Q9Y4F4 1720 aa26.96■■□□□ 1.91
RAP1B-222ENST00000540781 KCNQ4P56696 695 aa26.95■■□□□ 1.9
RAP1B-222ENST00000540781 PDGFDQ9GZP0 370 aaPredicted RBP26.95■■□□□ 1.9
RAP1B-222ENST00000540781 LY75O60449 1722 aa26.95■■□□□ 1.9
RAP1B-222ENST00000540781 CCNL1Q9UK58 526 aaPredicted RBP26.94■■□□□ 1.9
RAP1B-222ENST00000540781 ITGB4P16144 1822 aa26.94■■□□□ 1.9
RAP1B-222ENST00000540781 CASZ1Q86V15 1759 aa26.94■■□□□ 1.9
RAP1B-222ENST00000540781 ZNF827Q17R98 1081 aa26.93■■□□□ 1.9
RAP1B-222ENST00000540781 AMOTQ4VCS5 1084 aa26.93■■□□□ 1.9
RAP1B-222ENST00000540781 DIAPH1O60610 1272 aaKnown RBP26.91■■□□□ 1.9
RAP1B-222ENST00000540781 ZNF530Q6P9A1 599 aaPredicted RBP26.91■■□□□ 1.9
RAP1B-222ENST00000540781 PIGBQ92521 554 aa26.91■■□□□ 1.9
RAP1B-222ENST00000540781 AKT1S1Q96B36 256 aa26.91■■□□□ 1.9
RAP1B-222ENST00000540781 KDRP35968 1356 aa26.91■■□□□ 1.9
RAP1B-222ENST00000540781 PALLDQ8WX93 1383 aa26.9■■□□□ 1.9
RAP1B-222ENST00000540781 SMARCC1Q92922 1105 aaPredicted RBP26.9■■□□□ 1.9
RAP1B-222ENST00000540781 ZBTB7AO95365 584 aa26.89■■□□□ 1.9
RAP1B-222ENST00000540781 TMOD3Q9NYL9 352 aa26.89■■□□□ 1.9
RAP1B-222ENST00000540781 HSP90AB1P08238 724 aaKnown RBP26.88■■□□□ 1.89
RAP1B-222ENST00000540781 PPP1R1BQ9UD71 204 aaPredicted RBP26.87■■□□□ 1.89
RAP1B-222ENST00000540781 HMOX1P09601 288 aa26.86■■□□□ 1.89
RAP1B-222ENST00000540781 C1orf141Q5JVX7 400 aa26.86■■□□□ 1.89
RAP1B-222ENST00000540781 DCAF5Q96JK2 942 aa26.86■■□□□ 1.89
RAP1B-222ENST00000540781 ATF5Q9Y2D1 282 aaPredicted RBP26.86■■□□□ 1.89
RAP1B-222ENST00000540781 TFCP2L1Q9NZI6 479 aa26.85■■□□□ 1.89
RAP1B-222ENST00000540781 COL3A1P02461 1466 aaPredicted RBP26.83■■□□□ 1.89
RAP1B-222ENST00000540781 ERVV-2B6SEH9 535 aa26.83■■□□□ 1.89
RAP1B-222ENST00000540781 HMGB2P26583 209 aaKnown RBP26.83■■□□□ 1.89
RAP1B-222ENST00000540781 MTFR1LQ9H019 292 aa26.83■■□□□ 1.89
RAP1B-222ENST00000540781 ASAP1Q9ULH1 1129 aa26.82■■□□□ 1.88
RAP1B-222ENST00000540781 U2SURPO15042 1029 aaKnown RBP26.81■■□□□ 1.88
RAP1B-222ENST00000540781 CFAP53Q96M91 514 aa26.81■■□□□ 1.88
RAP1B-222ENST00000540781 PNPLA7Q6ZV29 1317 aa26.81■■□□□ 1.88
RAP1B-222ENST00000540781 QSER1Q2KHR3 1735 aa26.8■■□□□ 1.88
RAP1B-222ENST00000540781 PPP2R1AP30153 589 aa26.8■■□□□ 1.88
RAP1B-222ENST00000540781 KDM6AO15550 1401 aaPredicted RBP26.8■■□□□ 1.88
RAP1B-222ENST00000540781 ATG3Q9NT62 314 aa26.79■■□□□ 1.88
RAP1B-222ENST00000540781 PTGER2P43116 358 aa26.78■■□□□ 1.88
RAP1B-222ENST00000540781 CABP4P57796 275 aa26.78■■□□□ 1.88
RAP1B-222ENST00000540781 C5P01031 1676 aa26.78■■□□□ 1.88
RAP1B-222ENST00000540781 TUBGCP6Q96RT7 1819 aa26.78■■□□□ 1.88
RAP1B-222ENST00000540781 LOC102724428A0A0B4J2F2 783 aa26.77■■□□□ 1.88
RAP1B-222ENST00000540781 SIK1P57059 783 aa26.77■■□□□ 1.88
RAP1B-222ENST00000540781 AKAP4Q5JQC9 854 aa26.77■■□□□ 1.88
RAP1B-222ENST00000540781 SLC16A10Q8TF71 515 aa26.77■■□□□ 1.88
RAP1B-222ENST00000540781 TAF1LQ8IZX4 1826 aa26.76■■□□□ 1.88
RAP1B-222ENST00000540781 MSH5O43196 834 aa26.74■■□□□ 1.87
RAP1B-222ENST00000540781 MTHFSDQ2M296 383 aaKnown RBP26.74■■□□□ 1.87
RAP1B-222ENST00000540781 SGIP1Q9BQI5 828 aa26.73■■□□□ 1.87
RAP1B-222ENST00000540781 ATP6V1AP38606 617 aa26.72■■□□□ 1.87
RAP1B-222ENST00000540781 COL23A1Q86Y22 540 aaPredicted RBP26.72■■□□□ 1.87
RAP1B-222ENST00000540781 NFATC2IPQ8NCF5 419 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms