RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 RAPGEF4Q8WZA2 1011 aa26.15■■□□□ 1.78
DDX55-207ENST00000540763 EXOC5O00471 708 aa26.14■■□□□ 1.78
DDX55-207ENST00000540763 SF3B2Q13435 895 aaKnown RBP26.14■■□□□ 1.78
DDX55-207ENST00000540763 SBF2Q86WG5 1849 aa26.13■■□□□ 1.77
DDX55-207ENST00000540763 BCL9O00512 1426 aa26.13■■□□□ 1.77
DDX55-207ENST00000540763 TATP17735 454 aaPredicted RBP26.12■■□□□ 1.77
DDX55-207ENST00000540763 DEFB132Q7Z7B7 95 aa26.1■■□□□ 1.77
DDX55-207ENST00000540763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.08■■□□□ 1.772e-11■□□□□ 9.2
DDX55-207ENST00000540763 NUDCQ9Y266 331 aa26.08■■□□□ 1.77
DDX55-207ENST00000540763 FAM196AQ6ZSG2 479 aa26.07■■□□□ 1.76
DDX55-207ENST00000540763 ZCRB1Q8TBF4 217 aaKnown RBP26.07■■□□□ 1.76
DDX55-207ENST00000540763 TNS1Q9HBL0 1735 aaKnown RBP26.06■■□□□ 1.76
DDX55-207ENST00000540763 SULT6B1Q6IMI4 303 aa26.05■■□□□ 1.76
DDX55-207ENST00000540763 MARCH10Q8NA82 808 aaPredicted RBP26.05■■□□□ 1.76
DDX55-207ENST00000540763 PCDH11XQ9BZA7 1347 aa26.05■■□□□ 1.76
DDX55-207ENST00000540763 PCDH11YQ9BZA8 1340 aa26.05■■□□□ 1.76
DDX55-207ENST00000540763 NHSQ6T4R5 1651 aa26.04■■□□□ 1.76
DDX55-207ENST00000540763 ANP32CO43423 234 aa26.03■■□□□ 1.76
DDX55-207ENST00000540763 AEBP1Q8IUX7 1158 aa26.03■■□□□ 1.76
DDX55-207ENST00000540763 SPG7Q9UQ90 795 aa26.02■■□□□ 1.76
DDX55-207ENST00000540763 DOT1LQ8TEK3 1739 aa26.02■■□□□ 1.76
DDX55-207ENST00000540763 U2SURPO15042 1029 aaKnown RBP26■■□□□ 1.75
DDX55-207ENST00000540763 FAM182BQ5T319 152 aa26■■□□□ 1.75
DDX55-207ENST00000540763 BAG6P46379 1132 aa25.99■■□□□ 1.75
DDX55-207ENST00000540763 AMOTQ4VCS5 1084 aa25.99■■□□□ 1.75
DDX55-207ENST00000540763 RGPD3A6NKT7 1758 aaPredicted RBP25.97■■□□□ 1.75
DDX55-207ENST00000540763 RGPD4Q7Z3J3 1758 aa25.97■■□□□ 1.75
DDX55-207ENST00000540763 HMOX1P09601 288 aa25.97■■□□□ 1.75
DDX55-207ENST00000540763 PLEKHO1Q53GL0 409 aaPredicted RBP25.97■■□□□ 1.75
DDX55-207ENST00000540763 DDX54Q8TDD1 881 aaKnown RBP25.97■■□□□ 1.75
DDX55-207ENST00000540763 VIRMAQ69YN4 1812 aaKnown RBP25.97■■□□□ 1.75
DDX55-207ENST00000540763 TOGARAM1Q9Y4F4 1720 aa25.96■■□□□ 1.75
DDX55-207ENST00000540763 U2AF1L5P0DN76 240 aaPredicted RBP25.95■■□□□ 1.74
DDX55-207ENST00000540763 U2AF1Q01081 240 aaKnown RBP eCLIP25.95■■□□□ 1.74
DDX55-207ENST00000540763 ITGB4P16144 1822 aa25.94■■□□□ 1.74
DDX55-207ENST00000540763 CYP27B1O15528 508 aa25.94■■□□□ 1.74
DDX55-207ENST00000540763 FCHSD2O94868 740 aa25.94■■□□□ 1.74
DDX55-207ENST00000540763 RSPH6AQ9H0K4 717 aa25.94■■□□□ 1.74
DDX55-207ENST00000540763 KAT6BQ8WYB5 2073 aa25.94■■□□□ 1.74
DDX55-207ENST00000540763 NKX1-1Q15270 411 aaPredicted RBP25.93■■□□□ 1.74
DDX55-207ENST00000540763 BTAF1O14981 1849 aa25.93■■□□□ 1.74
DDX55-207ENST00000540763 SCN11AQ9UI33 1791 aa25.92■■□□□ 1.74
DDX55-207ENST00000540763 LRP5O75197 1615 aa25.92■■□□□ 1.74
DDX55-207ENST00000540763 IFNL2Q8IZJ0 200 aa25.92■■□□□ 1.74
DDX55-207ENST00000540763 ADAMTS7Q9UKP4 1686 aa25.91■■□□□ 1.74
DDX55-207ENST00000540763 PHKG2P15735 406 aa25.91■■□□□ 1.74
DDX55-207ENST00000540763 TRIM37O94972 964 aa25.89■■□□□ 1.74
DDX55-207ENST00000540763 HSP90AB1P08238 724 aaKnown RBP25.89■■□□□ 1.74
DDX55-207ENST00000540763 PRKAR2BP31323 418 aa25.89■■□□□ 1.74
DDX55-207ENST00000540763 ZNF530Q6P9A1 599 aaPredicted RBP25.89■■□□□ 1.74
DDX55-207ENST00000540763 BCL11BQ9C0K0 894 aaPredicted RBP25.89■■□□□ 1.74
DDX55-207ENST00000540763 PNNQ9H307 717 aaKnown RBP25.88■■□□□ 1.73
DDX55-207ENST00000540763 EN1Q05925 392 aaPredicted RBP25.87■■□□□ 1.73
DDX55-207ENST00000540763 C1orf141Q5JVX7 400 aa25.87■■□□□ 1.73
DDX55-207ENST00000540763 PSDA5PKW4 1024 aaPredicted RBP25.86■■□□□ 1.73
DDX55-207ENST00000540763 GAS2L2Q8NHY3 880 aa25.86■■□□□ 1.73
DDX55-207ENST00000540763 DLG5Q8TDM6 1919 aa25.85■■□□□ 1.73
DDX55-207ENST00000540763 WDR43Q15061 677 aaKnown RBP eCLIP25.85■■□□□ 1.73
DDX55-207ENST00000540763 AKAP4Q5JQC9 854 aa25.85■■□□□ 1.73
DDX55-207ENST00000540763 RREB1Q92766 1687 aa25.84■■□□□ 1.73
DDX55-207ENST00000540763 MTHFSDQ2M296 383 aaKnown RBP25.84■■□□□ 1.73
DDX55-207ENST00000540763 DCAF5Q96JK2 942 aa25.84■■□□□ 1.73
DDX55-207ENST00000540763 KDM6AO15550 1401 aaPredicted RBP25.83■■□□□ 1.73
DDX55-207ENST00000540763 NEFMP07197 916 aa25.83■■□□□ 1.73
DDX55-207ENST00000540763 ACSBG1Q96GR2 724 aa25.82■■□□□ 1.72
DDX55-207ENST00000540763 PLEKHF1Q96S99 279 aa25.82■■□□□ 1.72
DDX55-207ENST00000540763 MRC1P22897 1456 aa25.81■■□□□ 1.72
DDX55-207ENST00000540763 LY75O60449 1722 aa25.81■■□□□ 1.72
DDX55-207ENST00000540763 MAP3K5Q99683 1374 aa25.81■■□□□ 1.72
DDX55-207ENST00000540763 KCNQ2O43526 872 aa25.8■■□□□ 1.72
DDX55-207ENST00000540763 PHACTR3Q96KR7 559 aa25.8■■□□□ 1.72
DDX55-207ENST00000540763 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
DDX55-207ENST00000540763 PLSCR1O15162 318 aa25.79■■□□□ 1.72
DDX55-207ENST00000540763 APBA3O96018 575 aa25.79■■□□□ 1.72
DDX55-207ENST00000540763 PRIM1P49642 420 aaKnown RBP25.79■■□□□ 1.72
DDX55-207ENST00000540763 SIPA1L3O60292 1781 aaPredicted RBP25.78■■□□□ 1.72
DDX55-207ENST00000540763 DIEXFQ68CQ4 756 aaKnown RBP25.78■■□□□ 1.72
DDX55-207ENST00000540763 MRS2Q9HD23 443 aa25.78■■□□□ 1.72
DDX55-207ENST00000540763 CCDC184Q52MB2 194 aa25.77■■□□□ 1.72
DDX55-207ENST00000540763 PTF1AQ7RTS3 328 aa25.77■■□□□ 1.72
DDX55-207ENST00000540763 MAPK8IP3Q9UPT6 1336 aa25.77■■□□□ 1.72
DDX55-207ENST00000540763 EZH2Q15910 746 aaKnown RBP25.76■■□□□ 1.71
DDX55-207ENST00000540763 NUP188Q5SRE5 1749 aa25.76■■□□□ 1.71
DDX55-207ENST00000540763 GNAT3A8MTJ3 354 aa25.75■■□□□ 1.71
DDX55-207ENST00000540763 R3HDM1Q15032 1099 aaKnown RBP25.75■■□□□ 1.71
DDX55-207ENST00000540763 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
DDX55-207ENST00000540763 ADAMTS8Q9UP79 889 aa25.75■■□□□ 1.71
DDX55-207ENST00000540763 PAPPAQ13219 1627 aa25.74■■□□□ 1.71
DDX55-207ENST00000540763 MPRIPQ6WCQ1 1025 aa25.73■■□□□ 1.71
DDX55-207ENST00000540763 CAMKK2Q96RR4 588 aa25.73■■□□□ 1.71
DDX55-207ENST00000540763 TMOD3Q9NYL9 352 aa25.73■■□□□ 1.71
DDX55-207ENST00000540763 CEMIPQ8WUJ3 1361 aa25.72■■□□□ 1.71
DDX55-207ENST00000540763 ZNF831Q5JPB2 1677 aa25.72■■□□□ 1.71
DDX55-207ENST00000540763 RNMTO43148 476 aaKnown RBP25.72■■□□□ 1.71
DDX55-207ENST00000540763 HTATSF1O43719 755 aaKnown RBP25.72■■□□□ 1.71
DDX55-207ENST00000540763 PNISRQ8TF01 805 aaKnown RBP25.72■■□□□ 1.71
DDX55-207ENST00000540763 RUNDC1Q96C34 613 aa25.72■■□□□ 1.71
DDX55-207ENST00000540763 NFE2L2Q16236 605 aa25.71■■□□□ 1.71
DDX55-207ENST00000540763 CCER2I3L3R5 266 aa25.7■■□□□ 1.7
DDX55-207ENST00000540763 PIGBQ92521 554 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms