RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 PDGFDQ9GZP0 370 aaPredicted RBP23.19■■□□□ 1.3
PSMD3-204ENST00000540504 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
PSMD3-204ENST00000540504 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
PSMD3-204ENST00000540504 HSP90AB2PQ58FF8 381 aa23.17■■□□□ 1.3
PSMD3-204ENST00000540504 DOT1LQ8TEK3 1739 aa23.16■■□□□ 1.3
PSMD3-204ENST00000540504 ZBTB7AO95365 584 aa23.16■■□□□ 1.3
PSMD3-204ENST00000540504 TATP17735 454 aaPredicted RBP23.15■■□□□ 1.3
PSMD3-204ENST00000540504 MTFR1LQ9H019 292 aa23.15■■□□□ 1.3
PSMD3-204ENST00000540504 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
PSMD3-204ENST00000540504 SYTL4Q96C24 671 aaPredicted RBP23.14■■□□□ 1.29
PSMD3-204ENST00000540504 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
PSMD3-204ENST00000540504 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
PSMD3-204ENST00000540504 PTGER2P43116 358 aa23.13■■□□□ 1.29
PSMD3-204ENST00000540504 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
PSMD3-204ENST00000540504 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
PSMD3-204ENST00000540504 ANKRD26Q9UPS8 1709 aa23.12■■□□□ 1.29
PSMD3-204ENST00000540504 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
PSMD3-204ENST00000540504 LY75O60449 1722 aa23.11■■□□□ 1.29
PSMD3-204ENST00000540504 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
PSMD3-204ENST00000540504 NSD2O96028 1365 aa23.11■■□□□ 1.29
PSMD3-204ENST00000540504 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
PSMD3-204ENST00000540504 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
PSMD3-204ENST00000540504 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
PSMD3-204ENST00000540504 QSER1Q2KHR3 1735 aa23.1■■□□□ 1.29
PSMD3-204ENST00000540504 ZNF827Q17R98 1081 aa23.09■■□□□ 1.29
PSMD3-204ENST00000540504 AKT1S1Q96B36 256 aa23.09■■□□□ 1.29
PSMD3-204ENST00000540504 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
PSMD3-204ENST00000540504 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
PSMD3-204ENST00000540504 NCAPD2Q15021 1401 aa23.08■■□□□ 1.28
PSMD3-204ENST00000540504 SLC16A10Q8TF71 515 aa23.07■■□□□ 1.28
PSMD3-204ENST00000540504 SGIP1Q9BQI5 828 aa23.07■■□□□ 1.28
PSMD3-204ENST00000540504 POLR3GLQ9BT43 218 aa23.07■■□□□ 1.28
PSMD3-204ENST00000540504 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
PSMD3-204ENST00000540504 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
PSMD3-204ENST00000540504 HMGB2P26583 209 aaKnown RBP23.05■■□□□ 1.28
PSMD3-204ENST00000540504 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
PSMD3-204ENST00000540504 POLKQ9UBT6 870 aa23.03■■□□□ 1.28
PSMD3-204ENST00000540504 CCNL1Q9UK58 526 aaPredicted RBP23.03■■□□□ 1.28
PSMD3-204ENST00000540504 CYP27B1O15528 508 aa23.02■■□□□ 1.28
PSMD3-204ENST00000540504 ARXQ96QS3 562 aa23.02■■□□□ 1.28
PSMD3-204ENST00000540504 SYT17Q9BSW7 474 aa23.02■■□□□ 1.28
PSMD3-204ENST00000540504 FHDC1Q9C0D6 1143 aaPredicted RBP23.02■■□□□ 1.28
PSMD3-204ENST00000540504 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
PSMD3-204ENST00000540504 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
PSMD3-204ENST00000540504 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
PSMD3-204ENST00000540504 YY1P25490 414 aa23■■□□□ 1.27
PSMD3-204ENST00000540504 KCNQ4P56696 695 aa23■■□□□ 1.27
PSMD3-204ENST00000540504 EYA1Q99502 592 aa23■■□□□ 1.27
PSMD3-204ENST00000540504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
PSMD3-204ENST00000540504 TUBGCP6Q96RT7 1819 aa23■■□□□ 1.27
PSMD3-204ENST00000540504 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
PSMD3-204ENST00000540504 PANK3Q9H999 370 aa22.99■■□□□ 1.27
PSMD3-204ENST00000540504 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
PSMD3-204ENST00000540504 NKX1-1Q15270 411 aaPredicted RBP22.98■■□□□ 1.27
PSMD3-204ENST00000540504 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
PSMD3-204ENST00000540504 ITGB4P16144 1822 aa22.97■■□□□ 1.27
PSMD3-204ENST00000540504 POLD1P28340 1107 aa22.96■■□□□ 1.27
PSMD3-204ENST00000540504 MPRIPQ6WCQ1 1025 aa22.96■■□□□ 1.27
PSMD3-204ENST00000540504 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
PSMD3-204ENST00000540504 TOGARAM1Q9Y4F4 1720 aa22.96■■□□□ 1.27
PSMD3-204ENST00000540504 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
PSMD3-204ENST00000540504 PALLDQ8WX93 1383 aa22.95■■□□□ 1.26
PSMD3-204ENST00000540504 C5P01031 1676 aa22.94■■□□□ 1.26
PSMD3-204ENST00000540504 EIF4A2Q14240 407 aaKnown RBP22.94■■□□□ 1.26
PSMD3-204ENST00000540504 TAF1LQ8IZX4 1826 aa22.93■■□□□ 1.26
PSMD3-204ENST00000540504 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
PSMD3-204ENST00000540504 FLAD1Q8NFF5 587 aa22.91■■□□□ 1.26
PSMD3-204ENST00000540504 IGSF1Q8N6C5 1336 aa22.9■■□□□ 1.26
PSMD3-204ENST00000540504 PIGBQ92521 554 aa22.9■■□□□ 1.26
PSMD3-204ENST00000540504 PHKG2P15735 406 aa22.89■■□□□ 1.25
PSMD3-204ENST00000540504 MORC1Q86VD1 984 aa22.89■■□□□ 1.25
PSMD3-204ENST00000540504 COL23A1Q86Y22 540 aaPredicted RBP22.89■■□□□ 1.25
PSMD3-204ENST00000540504 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
PSMD3-204ENST00000540504 MSH5O43196 834 aa22.88■■□□□ 1.25
PSMD3-204ENST00000540504 TMOD3Q9NYL9 352 aa22.88■■□□□ 1.25
PSMD3-204ENST00000540504 C4BP0C0L5 1744 aa22.86■■□□□ 1.25
PSMD3-204ENST00000540504 AK7Q96M32 723 aa22.84■■□□□ 1.25
PSMD3-204ENST00000540504 CHD4Q14839 1912 aa22.84■■□□□ 1.25
PSMD3-204ENST00000540504 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
PSMD3-204ENST00000540504 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
PSMD3-204ENST00000540504 SIK1P57059 783 aa22.83■■□□□ 1.25
PSMD3-204ENST00000540504 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.25
PSMD3-204ENST00000540504 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
PSMD3-204ENST00000540504 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
PSMD3-204ENST00000540504 ERVV-2B6SEH9 535 aa22.81■■□□□ 1.24
PSMD3-204ENST00000540504 UBR3Q6ZT12 1888 aa22.81■■□□□ 1.24
PSMD3-204ENST00000540504 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
PSMD3-204ENST00000540504 GPR162Q16538 588 aa22.8■■□□□ 1.24
PSMD3-204ENST00000540504 AMER1Q5JTC6 1135 aaPredicted RBP22.8■■□□□ 1.24
PSMD3-204ENST00000540504 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
PSMD3-204ENST00000540504 ASAP1Q9ULH1 1129 aa22.8■■□□□ 1.24
PSMD3-204ENST00000540504 SSFA2P28290 1259 aa22.78■■□□□ 1.24
PSMD3-204ENST00000540504 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
PSMD3-204ENST00000540504 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
PSMD3-204ENST00000540504 MSL1Q68DK7 614 aa22.77■■□□□ 1.24
PSMD3-204ENST00000540504 ZNF530Q6P9A1 599 aaPredicted RBP22.77■■□□□ 1.24
PSMD3-204ENST00000540504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.76■■□□□ 1.23
PSMD3-204ENST00000540504 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
PSMD3-204ENST00000540504 NLGN2Q8NFZ4 835 aa22.76■■□□□ 1.23
PSMD3-204ENST00000540504 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms