RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
TMEM258-205ENST00000540434 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
TMEM258-205ENST00000540434 NME9Q86XW9 330 aa15.94■□□□□ 0.14
TMEM258-205ENST00000540434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.94■□□□□ 0.14
TMEM258-205ENST00000540434 SOX12O15370 315 aa15.92■□□□□ 0.14
TMEM258-205ENST00000540434 APLP1P51693 650 aa15.92■□□□□ 0.14
TMEM258-205ENST00000540434 HTRA3P83110 453 aa15.92■□□□□ 0.14
TMEM258-205ENST00000540434 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
TMEM258-205ENST00000540434 TNS2Q63HR2 1409 aa15.92■□□□□ 0.14
TMEM258-205ENST00000540434 CARD14Q9BXL6 1004 aa15.91■□□□□ 0.14
TMEM258-205ENST00000540434 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
TMEM258-205ENST00000540434 TNS4Q8IZW8 715 aa15.9■□□□□ 0.14
TMEM258-205ENST00000540434 PRELPP51888 382 aa15.89■□□□□ 0.13
TMEM258-205ENST00000540434 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.13
TMEM258-205ENST00000540434 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
TMEM258-205ENST00000540434 ABCC6O95255 1503 aa15.89■□□□□ 0.13
TMEM258-205ENST00000540434 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 MSH5O43196 834 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 SLC24A1O60721 1099 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 FBLN1P23142 703 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 NFAT5O94916 1531 aa15.88■□□□□ 0.13
TMEM258-205ENST00000540434 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
TMEM258-205ENST00000540434 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
TMEM258-205ENST00000540434 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
TMEM258-205ENST00000540434 KCNH5Q8NCM2 988 aa15.86■□□□□ 0.13
TMEM258-205ENST00000540434 COL23A1Q86Y22 540 aaPredicted RBP15.85■□□□□ 0.13
TMEM258-205ENST00000540434 FYB1O15117 783 aa15.84■□□□□ 0.13
TMEM258-205ENST00000540434 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
TMEM258-205ENST00000540434 USP54Q70EL1 1684 aa15.83■□□□□ 0.13
TMEM258-205ENST00000540434 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
TMEM258-205ENST00000540434 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.12
TMEM258-205ENST00000540434 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
TMEM258-205ENST00000540434 LY75O60449 1722 aa15.82■□□□□ 0.12
TMEM258-205ENST00000540434 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
TMEM258-205ENST00000540434 PCNTO95613 3336 aa15.81■□□□□ 0.12
TMEM258-205ENST00000540434 KLRG1Q96E93 195 aa15.81■□□□□ 0.12
TMEM258-205ENST00000540434 PANK3Q9H999 370 aa15.81■□□□□ 0.12
TMEM258-205ENST00000540434 LTN1O94822 1766 aa15.8■□□□□ 0.12
TMEM258-205ENST00000540434 TOMM70O94826 608 aa15.8■□□□□ 0.12
TMEM258-205ENST00000540434 IL2RBP14784 551 aa15.8■□□□□ 0.12
TMEM258-205ENST00000540434 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
TMEM258-205ENST00000540434 NSD3Q9BZ95 1437 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 ERBB3P21860 1342 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 SLC34A2O95436 690 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 JMYQ8N9B5 988 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
TMEM258-205ENST00000540434 NMRK2Q9NPI5 230 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 CD2APQ9Y5K6 639 aa15.79■□□□□ 0.12
TMEM258-205ENST00000540434 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
TMEM258-205ENST00000540434 IGSF1Q8N6C5 1336 aa15.78■□□□□ 0.12
TMEM258-205ENST00000540434 DDX54Q8TDD1 881 aaKnown RBP15.78■□□□□ 0.12
TMEM258-205ENST00000540434 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
TMEM258-205ENST00000540434 KIF20BQ96Q89 1820 aa15.75■□□□□ 0.11
TMEM258-205ENST00000540434 COG3Q96JB2 828 aa15.75■□□□□ 0.11
TMEM258-205ENST00000540434 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
TMEM258-205ENST00000540434 RRS1Q15050 365 aaKnown RBP15.74■□□□□ 0.11
TMEM258-205ENST00000540434 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
TMEM258-205ENST00000540434 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
TMEM258-205ENST00000540434 NSD2O96028 1365 aa15.74■□□□□ 0.11
TMEM258-205ENST00000540434 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
TMEM258-205ENST00000540434 ANKRD24Q8TF21 1146 aa15.73■□□□□ 0.11
TMEM258-205ENST00000540434 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
TMEM258-205ENST00000540434 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
TMEM258-205ENST00000540434 IP6K1Q92551 441 aa15.7■□□□□ 0.1
TMEM258-205ENST00000540434 TAF1LQ8IZX4 1826 aa15.7■□□□□ 0.1
TMEM258-205ENST00000540434 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
TMEM258-205ENST00000540434 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
TMEM258-205ENST00000540434 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
TMEM258-205ENST00000540434 EMILIN1Q9Y6C2 1016 aa15.69■□□□□ 0.1
TMEM258-205ENST00000540434 RGPD2P0DJD1 1756 aa15.69■□□□□ 0.1
TMEM258-205ENST00000540434 HOXC9P31274 260 aa15.68■□□□□ 0.1
TMEM258-205ENST00000540434 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
TMEM258-205ENST00000540434 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
TMEM258-205ENST00000540434 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
TMEM258-205ENST00000540434 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
TMEM258-205ENST00000540434 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
TMEM258-205ENST00000540434 HSP90AB2PQ58FF8 381 aa15.67■□□□□ 0.1
TMEM258-205ENST00000540434 C5P01031 1676 aa15.67■□□□□ 0.1
TMEM258-205ENST00000540434 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
TMEM258-205ENST00000540434 CICQ96RK0 1608 aaPredicted RBP15.66■□□□□ 0.1
TMEM258-205ENST00000540434 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
TMEM258-205ENST00000540434 PHF14O94880 888 aa15.65■□□□□ 0.1
TMEM258-205ENST00000540434 AMPHP49418 695 aa15.65■□□□□ 0.1
TMEM258-205ENST00000540434 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
TMEM258-205ENST00000540434 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
TMEM258-205ENST00000540434 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
TMEM258-205ENST00000540434 BCS1LQ9Y276 419 aa15.63■□□□□ 0.09
TMEM258-205ENST00000540434 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
TMEM258-205ENST00000540434 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
TMEM258-205ENST00000540434 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
TMEM258-205ENST00000540434 ZCRB1Q8TBF4 217 aaKnown RBP15.62■□□□□ 0.09
TMEM258-205ENST00000540434 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
TMEM258-205ENST00000540434 UBR3Q6ZT12 1888 aa15.62■□□□□ 0.09
TMEM258-205ENST00000540434 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
TMEM258-205ENST00000540434 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
TMEM258-205ENST00000540434 FSTL1Q12841 308 aa15.61■□□□□ 0.09
TMEM258-205ENST00000540434 CC2D1BQ5T0F9 858 aaKnown RBP15.61■□□□□ 0.09
TMEM258-205ENST00000540434 RRAGCQ9HB90 399 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms