RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 BTAF1O14981 1849 aa14.8□□□□□ -0.04
SLC3A2-215ENST00000539891 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 MORC1Q86VD1 984 aa14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 USHBP1Q8N6Y0 703 aa14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
SLC3A2-215ENST00000539891 KCNQ2O43526 872 aa14.77□□□□□ -0.04
SLC3A2-215ENST00000539891 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.04
SLC3A2-215ENST00000539891 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.04
SLC3A2-215ENST00000539891 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.05
SLC3A2-215ENST00000539891 DOT1LQ8TEK3 1739 aa14.77□□□□□ -0.05
SLC3A2-215ENST00000539891 EIF4A2Q14240 407 aaKnown RBP14.76□□□□□ -0.05
SLC3A2-215ENST00000539891 EYA1Q99502 592 aa14.76□□□□□ -0.05
SLC3A2-215ENST00000539891 ACSBG1Q96GR2 724 aa14.75□□□□□ -0.05
SLC3A2-215ENST00000539891 PLEKHG2Q9H7P9 1386 aa14.75□□□□□ -0.05
SLC3A2-215ENST00000539891 PROM2Q8N271 834 aa14.74□□□□□ -0.05
SLC3A2-215ENST00000539891 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 IGSF1Q8N6C5 1336 aa14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 PCDH11XQ9BZA7 1347 aa14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 PCDH11YQ9BZA8 1340 aa14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 LRP5O75197 1615 aa14.73□□□□□ -0.05
SLC3A2-215ENST00000539891 ITGB4P16144 1822 aa14.72□□□□□ -0.05
SLC3A2-215ENST00000539891 R3HDM1Q15032 1099 aaKnown RBP14.72□□□□□ -0.05
SLC3A2-215ENST00000539891 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
SLC3A2-215ENST00000539891 LY75O60449 1722 aa14.71□□□□□ -0.05
SLC3A2-215ENST00000539891 CYP27B1O15528 508 aa14.7□□□□□ -0.06
SLC3A2-215ENST00000539891 CC2D1BQ5T0F9 858 aaKnown RBP14.7□□□□□ -0.06
SLC3A2-215ENST00000539891 SPG7Q9UQ90 795 aa14.7□□□□□ -0.06
SLC3A2-215ENST00000539891 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
SLC3A2-215ENST00000539891 PRIM1P49642 420 aaKnown RBP14.69□□□□□ -0.06
SLC3A2-215ENST00000539891 PAPPAQ13219 1627 aa14.68□□□□□ -0.06
SLC3A2-215ENST00000539891 IL13P35225 146 aa14.68□□□□□ -0.06
SLC3A2-215ENST00000539891 MTHFSP49914 203 aa14.68□□□□□ -0.06
SLC3A2-215ENST00000539891 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
SLC3A2-215ENST00000539891 KDRP35968 1356 aa14.67□□□□□ -0.06
SLC3A2-215ENST00000539891 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
SLC3A2-215ENST00000539891 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
SLC3A2-215ENST00000539891 ANO8Q9HCE9 1232 aaPredicted RBP14.66□□□□□ -0.06
SLC3A2-215ENST00000539891 SLC27A3Q5K4L6 730 aa14.66□□□□□ -0.06
SLC3A2-215ENST00000539891 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
SLC3A2-215ENST00000539891 QSER1Q2KHR3 1735 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 PHKG2P15735 406 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 SLC15A2Q16348 729 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 AEBP1Q8IUX7 1158 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 LRRC4BQ9NT99 713 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 STK32BQ9NY57 414 aa14.64□□□□□ -0.07
SLC3A2-215ENST00000539891 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
SLC3A2-215ENST00000539891 TAF1LQ8IZX4 1826 aa14.63□□□□□ -0.07
SLC3A2-215ENST00000539891 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
SLC3A2-215ENST00000539891 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
SLC3A2-215ENST00000539891 DIAPH1O60610 1272 aaKnown RBP14.62□□□□□ -0.07
SLC3A2-215ENST00000539891 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
SLC3A2-215ENST00000539891 TUBGCP6Q96RT7 1819 aa14.61□□□□□ -0.07
SLC3A2-215ENST00000539891 MPRIPQ6WCQ1 1025 aa14.61□□□□□ -0.07
SLC3A2-215ENST00000539891 SCN11AQ9UI33 1791 aa14.61□□□□□ -0.07
SLC3A2-215ENST00000539891 HSP90AB1P08238 724 aaKnown RBP14.6□□□□□ -0.07
SLC3A2-215ENST00000539891 PIGBQ92521 554 aa14.6□□□□□ -0.07
SLC3A2-215ENST00000539891 C5P01031 1676 aa14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 ERVV-2B6SEH9 535 aa14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 HMGB2P26583 209 aaKnown RBP14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 SMARCC1Q92922 1105 aaPredicted RBP14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 DCAF5Q96JK2 942 aa14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 CCNL1Q9UK58 526 aaPredicted RBP14.59□□□□□ -0.07
SLC3A2-215ENST00000539891 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
SLC3A2-215ENST00000539891 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
SLC3A2-215ENST00000539891 ZNF827Q17R98 1081 aa14.58□□□□□ -0.08
SLC3A2-215ENST00000539891 SPON1Q9HCB6 807 aa14.58□□□□□ -0.08
SLC3A2-215ENST00000539891 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
SLC3A2-215ENST00000539891 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
SLC3A2-215ENST00000539891 KDM6AO15550 1401 aaPredicted RBP14.57□□□□□ -0.08
SLC3A2-215ENST00000539891 ZNF831Q5JPB2 1677 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 HMOX1P09601 288 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 KCNQ4P56696 695 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 COL24A1Q17RW2 1714 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 C1orf141Q5JVX7 400 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 CFAP53Q96M91 514 aa14.56□□□□□ -0.08
SLC3A2-215ENST00000539891 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
SLC3A2-215ENST00000539891 ADAMTS7Q9UKP4 1686 aa14.55□□□□□ -0.08
SLC3A2-215ENST00000539891 AKAP4Q5JQC9 854 aa14.54□□□□□ -0.08
SLC3A2-215ENST00000539891 C4BP0C0L5 1744 aa14.54□□□□□ -0.08
SLC3A2-215ENST00000539891 MTFR1LQ9H019 292 aa14.53□□□□□ -0.08
SLC3A2-215ENST00000539891 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
SLC3A2-215ENST00000539891 ASAP1Q9ULH1 1129 aa14.53□□□□□ -0.08
SLC3A2-215ENST00000539891 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
SLC3A2-215ENST00000539891 UBR3Q6ZT12 1888 aa14.53□□□□□ -0.08
SLC3A2-215ENST00000539891 LOC102724428A0A0B4J2F2 783 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 ZBTB7AO95365 584 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 SIK1P57059 783 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 SLC16A10Q8TF71 515 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 NUDCQ9Y266 331 aa14.52□□□□□ -0.08
SLC3A2-215ENST00000539891 PTGER2P43116 358 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms