RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
UBE3B-211ENST00000539843 PRIM1P49642 420 aaKnown RBP21.15■□□□□ 0.98
UBE3B-211ENST00000539843 NBPF6Q5VWK0 638 aa21.15■□□□□ 0.98
UBE3B-211ENST00000539843 NBPF4Q96M43 638 aa21.15■□□□□ 0.98
UBE3B-211ENST00000539843 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
UBE3B-211ENST00000539843 MEGF6O75095 1541 aa21.14■□□□□ 0.98
UBE3B-211ENST00000539843 PCDH11XQ9BZA7 1347 aa21.14■□□□□ 0.97
UBE3B-211ENST00000539843 PCDH11YQ9BZA8 1340 aa21.14■□□□□ 0.97
UBE3B-211ENST00000539843 PDGFDQ9GZP0 370 aaPredicted RBP21.14■□□□□ 0.97
UBE3B-211ENST00000539843 YY1P25490 414 aa21.13■□□□□ 0.97
UBE3B-211ENST00000539843 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
UBE3B-211ENST00000539843 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
UBE3B-211ENST00000539843 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
UBE3B-211ENST00000539843 PTGER2P43116 358 aa21.11■□□□□ 0.97
UBE3B-211ENST00000539843 EIF4G2P78344 907 aaKnown RBP eCLIP21.11■□□□□ 0.97
UBE3B-211ENST00000539843 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
UBE3B-211ENST00000539843 POLD1P28340 1107 aa21.1■□□□□ 0.97
UBE3B-211ENST00000539843 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
UBE3B-211ENST00000539843 SLC16A10Q8TF71 515 aa21.1■□□□□ 0.97
UBE3B-211ENST00000539843 CARD14Q9BXL6 1004 aa21.1■□□□□ 0.97
UBE3B-211ENST00000539843 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
UBE3B-211ENST00000539843 ZNF827Q17R98 1081 aa21.09■□□□□ 0.97
UBE3B-211ENST00000539843 LRRC4BQ9NT99 713 aa21.09■□□□□ 0.97
UBE3B-211ENST00000539843 CCNL1Q9UK58 526 aaPredicted RBP21.09■□□□□ 0.97
UBE3B-211ENST00000539843 DOT1LQ8TEK3 1739 aa21.09■□□□□ 0.97
UBE3B-211ENST00000539843 ARXQ96QS3 562 aa21.08■□□□□ 0.97
UBE3B-211ENST00000539843 EMILIN1Q9Y6C2 1016 aa21.08■□□□□ 0.97
UBE3B-211ENST00000539843 MYOM1P52179 1685 aa21.08■□□□□ 0.96
UBE3B-211ENST00000539843 AKT1S1Q96B36 256 aa21.07■□□□□ 0.96
UBE3B-211ENST00000539843 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
UBE3B-211ENST00000539843 RGPD2P0DJD1 1756 aa21.06■□□□□ 0.96
UBE3B-211ENST00000539843 SYT17Q9BSW7 474 aa21.05■□□□□ 0.96
UBE3B-211ENST00000539843 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
UBE3B-211ENST00000539843 NSD2O96028 1365 aa21.04■□□□□ 0.96
UBE3B-211ENST00000539843 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
UBE3B-211ENST00000539843 MSH5O43196 834 aa21.03■□□□□ 0.96
UBE3B-211ENST00000539843 SHANK3Q9BYB0 1731 aa21.02■□□□□ 0.96
UBE3B-211ENST00000539843 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
UBE3B-211ENST00000539843 KLHL34Q8N239 644 aa21.02■□□□□ 0.96
UBE3B-211ENST00000539843 SMARCC1Q92922 1105 aaPredicted RBP21.02■□□□□ 0.96
UBE3B-211ENST00000539843 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
UBE3B-211ENST00000539843 PNPLA7Q6ZV29 1317 aa21.02■□□□□ 0.95
UBE3B-211ENST00000539843 MAP3K5Q99683 1374 aa21■□□□□ 0.95
UBE3B-211ENST00000539843 KCNQ4P56696 695 aa21■□□□□ 0.95
UBE3B-211ENST00000539843 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
UBE3B-211ENST00000539843 LY75O60449 1722 aa20.99■□□□□ 0.95
UBE3B-211ENST00000539843 HSPA5P11021 654 aaKnown RBP20.99■□□□□ 0.95
UBE3B-211ENST00000539843 TNNT2P45379 298 aaPredicted RBP20.99■□□□□ 0.95
UBE3B-211ENST00000539843 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
UBE3B-211ENST00000539843 QSER1Q2KHR3 1735 aa20.98■□□□□ 0.95
UBE3B-211ENST00000539843 CYP27B1O15528 508 aa20.98■□□□□ 0.95
UBE3B-211ENST00000539843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.98■□□□□ 0.95
UBE3B-211ENST00000539843 POLKQ9UBT6 870 aa20.98■□□□□ 0.95
UBE3B-211ENST00000539843 EYA1Q99502 592 aa20.97■□□□□ 0.95
UBE3B-211ENST00000539843 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
UBE3B-211ENST00000539843 PANK3Q9H999 370 aa20.96■□□□□ 0.95
UBE3B-211ENST00000539843 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
UBE3B-211ENST00000539843 IFNL2Q8IZJ0 200 aa20.95■□□□□ 0.94
UBE3B-211ENST00000539843 PLEKHG2Q9H7P9 1386 aa20.95■□□□□ 0.94
UBE3B-211ENST00000539843 GPR162Q16538 588 aa20.94■□□□□ 0.94
UBE3B-211ENST00000539843 AK7Q96M32 723 aa20.94■□□□□ 0.94
UBE3B-211ENST00000539843 TMOD3Q9NYL9 352 aa20.94■□□□□ 0.94
UBE3B-211ENST00000539843 PKD1L3Q7Z443 1732 aa20.93■□□□□ 0.94
UBE3B-211ENST00000539843 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
UBE3B-211ENST00000539843 KNSTRNQ9Y448 316 aa20.93■□□□□ 0.94
UBE3B-211ENST00000539843 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
UBE3B-211ENST00000539843 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
UBE3B-211ENST00000539843 HSP90AB1P08238 724 aaKnown RBP20.91■□□□□ 0.94
UBE3B-211ENST00000539843 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
UBE3B-211ENST00000539843 COL23A1Q86Y22 540 aaPredicted RBP20.9■□□□□ 0.94
UBE3B-211ENST00000539843 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
UBE3B-211ENST00000539843 PIGBQ92521 554 aa20.9■□□□□ 0.94
UBE3B-211ENST00000539843 C5P01031 1676 aa20.89■□□□□ 0.94
UBE3B-211ENST00000539843 PHKG2P15735 406 aa20.89■□□□□ 0.93
UBE3B-211ENST00000539843 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
UBE3B-211ENST00000539843 LOC102724428A0A0B4J2F2 783 aa20.87■□□□□ 0.93
UBE3B-211ENST00000539843 SIK1P57059 783 aa20.87■□□□□ 0.93
UBE3B-211ENST00000539843 AMOTQ4VCS5 1084 aa20.87■□□□□ 0.93
UBE3B-211ENST00000539843 TUBGCP6Q96RT7 1819 aa20.87■□□□□ 0.93
UBE3B-211ENST00000539843 IGSF1Q8N6C5 1336 aa20.86■□□□□ 0.93
UBE3B-211ENST00000539843 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
UBE3B-211ENST00000539843 TOGARAM1Q9Y4F4 1720 aa20.85■□□□□ 0.93
UBE3B-211ENST00000539843 PHF14O94880 888 aa20.84■□□□□ 0.93
UBE3B-211ENST00000539843 SSFA2P28290 1259 aa20.84■□□□□ 0.93
UBE3B-211ENST00000539843 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
UBE3B-211ENST00000539843 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
UBE3B-211ENST00000539843 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
UBE3B-211ENST00000539843 ERVV-2B6SEH9 535 aa20.83■□□□□ 0.93
UBE3B-211ENST00000539843 GRIN3BO60391 1043 aa20.83■□□□□ 0.93
UBE3B-211ENST00000539843 C4BP0C0L5 1744 aa20.83■□□□□ 0.92
UBE3B-211ENST00000539843 COL24A1Q17RW2 1714 aa20.83■□□□□ 0.92
UBE3B-211ENST00000539843 ITGB4P16144 1822 aa20.83■□□□□ 0.92
UBE3B-211ENST00000539843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
UBE3B-211ENST00000539843 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
UBE3B-211ENST00000539843 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
UBE3B-211ENST00000539843 CD2APQ9Y5K6 639 aa20.81■□□□□ 0.92
UBE3B-211ENST00000539843 GNPATO15228 680 aa20.8■□□□□ 0.92
UBE3B-211ENST00000539843 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
UBE3B-211ENST00000539843 ASAP1Q9ULH1 1129 aa20.8■□□□□ 0.92
UBE3B-211ENST00000539843 CABP4P57796 275 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms