RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 PLEKHG2Q9H7P9 1386 aa23.34■■□□□ 1.33
SLC3A2-213ENST00000539458 KDRP35968 1356 aa23.33■■□□□ 1.33
SLC3A2-213ENST00000539458 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
SLC3A2-213ENST00000539458 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.32
SLC3A2-213ENST00000539458 FAM182BQ5T319 152 aa23.32■■□□□ 1.32
SLC3A2-213ENST00000539458 EP400Q96L91 3159 aa23.31■■□□□ 1.32
SLC3A2-213ENST00000539458 MARCH10Q8NA82 808 aaPredicted RBP23.31■■□□□ 1.32
SLC3A2-213ENST00000539458 SULT6B1Q6IMI4 303 aa23.3■■□□□ 1.32
SLC3A2-213ENST00000539458 ZCRB1Q8TBF4 217 aaKnown RBP23.3■■□□□ 1.32
SLC3A2-213ENST00000539458 FAM196AQ6ZSG2 479 aa23.29■■□□□ 1.32
SLC3A2-213ENST00000539458 AEBP1Q8IUX7 1158 aa23.29■■□□□ 1.32
SLC3A2-213ENST00000539458 BCL9O00512 1426 aa23.28■■□□□ 1.32
SLC3A2-213ENST00000539458 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
SLC3A2-213ENST00000539458 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
SLC3A2-213ENST00000539458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.26■■□□□ 1.31
SLC3A2-213ENST00000539458 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
SLC3A2-213ENST00000539458 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
SLC3A2-213ENST00000539458 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
SLC3A2-213ENST00000539458 ANP32CO43423 234 aa23.25■■□□□ 1.31
SLC3A2-213ENST00000539458 HMOX1P09601 288 aa23.25■■□□□ 1.31
SLC3A2-213ENST00000539458 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
SLC3A2-213ENST00000539458 PSDA5PKW4 1024 aaPredicted RBP23.23■■□□□ 1.31
SLC3A2-213ENST00000539458 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
SLC3A2-213ENST00000539458 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
SLC3A2-213ENST00000539458 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
SLC3A2-213ENST00000539458 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
SLC3A2-213ENST00000539458 TNS1Q9HBL0 1735 aaKnown RBP23.21■■□□□ 1.31
SLC3A2-213ENST00000539458 CYP27B1O15528 508 aa23.2■■□□□ 1.3
SLC3A2-213ENST00000539458 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
SLC3A2-213ENST00000539458 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
SLC3A2-213ENST00000539458 NHSQ6T4R5 1651 aa23.19■■□□□ 1.3
SLC3A2-213ENST00000539458 LRP5O75197 1615 aa23.19■■□□□ 1.3
SLC3A2-213ENST00000539458 TRIM37O94972 964 aa23.18■■□□□ 1.3
SLC3A2-213ENST00000539458 RSPH6AQ9H0K4 717 aa23.18■■□□□ 1.3
SLC3A2-213ENST00000539458 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
SLC3A2-213ENST00000539458 DOT1LQ8TEK3 1739 aa23.18■■□□□ 1.3
SLC3A2-213ENST00000539458 FCHSD2O94868 740 aa23.16■■□□□ 1.3
SLC3A2-213ENST00000539458 PHKG2P15735 406 aa23.16■■□□□ 1.3
SLC3A2-213ENST00000539458 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
SLC3A2-213ENST00000539458 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
SLC3A2-213ENST00000539458 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
SLC3A2-213ENST00000539458 PRKAR2BP31323 418 aa23.14■■□□□ 1.29
SLC3A2-213ENST00000539458 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
SLC3A2-213ENST00000539458 TOGARAM1Q9Y4F4 1720 aa23.13■■□□□ 1.29
SLC3A2-213ENST00000539458 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
SLC3A2-213ENST00000539458 ACSBG1Q96GR2 724 aa23.13■■□□□ 1.29
SLC3A2-213ENST00000539458 MTHFSDQ2M296 383 aaKnown RBP23.11■■□□□ 1.29
SLC3A2-213ENST00000539458 C1orf141Q5JVX7 400 aa23.11■■□□□ 1.29
SLC3A2-213ENST00000539458 KCNQ2O43526 872 aa23.1■■□□□ 1.29
SLC3A2-213ENST00000539458 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
SLC3A2-213ENST00000539458 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
SLC3A2-213ENST00000539458 APBA3O96018 575 aa23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 WDR43Q15061 677 aaKnown RBP eCLIP23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 EZH2Q15910 746 aaKnown RBP23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
SLC3A2-213ENST00000539458 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
SLC3A2-213ENST00000539458 GAS2L2Q8NHY3 880 aa23.08■■□□□ 1.29
SLC3A2-213ENST00000539458 PHACTR3Q96KR7 559 aa23.08■■□□□ 1.29
SLC3A2-213ENST00000539458 RGPD3A6NKT7 1758 aaPredicted RBP23.08■■□□□ 1.29
SLC3A2-213ENST00000539458 RGPD4Q7Z3J3 1758 aa23.08■■□□□ 1.29
SLC3A2-213ENST00000539458 BTAF1O14981 1849 aa23.08■■□□□ 1.28
SLC3A2-213ENST00000539458 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
SLC3A2-213ENST00000539458 CCDC184Q52MB2 194 aa23.07■■□□□ 1.28
SLC3A2-213ENST00000539458 SYTL4Q96C24 671 aaPredicted RBP23.07■■□□□ 1.28
SLC3A2-213ENST00000539458 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
SLC3A2-213ENST00000539458 NEFMP07197 916 aa23.06■■□□□ 1.28
SLC3A2-213ENST00000539458 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
SLC3A2-213ENST00000539458 ITGB4P16144 1822 aa23.05■■□□□ 1.28
SLC3A2-213ENST00000539458 NBPF14Q5TI25 921 aa23.05■■□□□ 1.28
SLC3A2-213ENST00000539458 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
SLC3A2-213ENST00000539458 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
SLC3A2-213ENST00000539458 MAP3K5Q99683 1374 aa23.04■■□□□ 1.28
SLC3A2-213ENST00000539458 CAMKK2Q96RR4 588 aa23.04■■□□□ 1.28
SLC3A2-213ENST00000539458 PLSCR1O15162 318 aa23.03■■□□□ 1.28
SLC3A2-213ENST00000539458 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
SLC3A2-213ENST00000539458 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
SLC3A2-213ENST00000539458 ADAMTS8Q9UP79 889 aa23.03■■□□□ 1.28
SLC3A2-213ENST00000539458 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
SLC3A2-213ENST00000539458 ERVV-2B6SEH9 535 aa23.02■■□□□ 1.28
SLC3A2-213ENST00000539458 RREB1Q92766 1687 aa23.01■■□□□ 1.27
SLC3A2-213ENST00000539458 GNAT3A8MTJ3 354 aa23.01■■□□□ 1.27
SLC3A2-213ENST00000539458 MRC1P22897 1456 aa23■■□□□ 1.27
SLC3A2-213ENST00000539458 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
SLC3A2-213ENST00000539458 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
SLC3A2-213ENST00000539458 RNMTO43148 476 aaKnown RBP22.99■■□□□ 1.27
SLC3A2-213ENST00000539458 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
SLC3A2-213ENST00000539458 PIGBQ92521 554 aa22.98■■□□□ 1.27
SLC3A2-213ENST00000539458 RUNDC1Q96C34 613 aa22.98■■□□□ 1.27
SLC3A2-213ENST00000539458 LGR6Q9HBX8 967 aa22.98■■□□□ 1.27
SLC3A2-213ENST00000539458 CABP4P57796 275 aa22.97■■□□□ 1.27
SLC3A2-213ENST00000539458 NFE2L2Q16236 605 aa22.97■■□□□ 1.27
SLC3A2-213ENST00000539458 LY75O60449 1722 aa22.96■■□□□ 1.27
SLC3A2-213ENST00000539458 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
SLC3A2-213ENST00000539458 NUP188Q5SRE5 1749 aa22.96■■□□□ 1.27
SLC3A2-213ENST00000539458 HTATSF1O43719 755 aaKnown RBP22.95■■□□□ 1.26
SLC3A2-213ENST00000539458 DLG5Q8TDM6 1919 aa22.95■■□□□ 1.26
SLC3A2-213ENST00000539458 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
SLC3A2-213ENST00000539458 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms