RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 HOXC9P31274 260 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 ZMYND15Q9H091 742 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 AKAP12Q02952 1782 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 NBPF14Q5TI25 921 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 BABAM1Q9NWV8 329 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 FAM208AQ9UK61 1670 aaKnown RBP4.69□□□□□ -1.66
PTPN22-211ENST00000538253 PPM1GO15355 546 aaPredicted RBP4.69□□□□□ -1.66
PTPN22-211ENST00000538253 KRT27Q7Z3Y8 459 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 ERBB3P21860 1342 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 MAP3K19Q56UN5 1328 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 SPATA31A1Q5TZJ5 1347 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 ALS2Q96Q42 1657 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 IRX6P78412 446 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 FLAD1Q8NFF5 587 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 ZCRB1Q8TBF4 217 aaKnown RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 TEX13AQ9BXU3 409 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 NCAPD2Q15021 1401 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 SOS1Q07889 1333 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 ONECUT3O60422 494 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 DDX10Q13206 875 aaKnown RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 TRPM3Q9HCF6 1732 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-211ENST00000538253 NUTM2GQ5VZR2 741 aa4.68□□□□□ -1.66
PTPN22-211ENST00000538253 BCL9O00512 1426 aa4.67□□□□□ -1.66
PTPN22-211ENST00000538253 FAM83GA6ND36 823 aa4.67□□□□□ -1.66
PTPN22-211ENST00000538253 CC2D1BQ5T0F9 858 aaKnown RBP4.67□□□□□ -1.66
PTPN22-211ENST00000538253 CD163L1Q9NR16 1453 aa4.67□□□□□ -1.66
PTPN22-211ENST00000538253 U2SURPO15042 1029 aaKnown RBP4.67□□□□□ -1.66
PTPN22-211ENST00000538253 SEPT12Q8IYM1 358 aa4.67□□□□□ -1.66
PTPN22-211ENST00000538253 NRKQ7Z2Y5 1582 aa4.67□□□□□ -1.66
PTPN22-211ENST00000538253 DCAF8L1A6NGE4 600 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 ERVV-2B6SEH9 535 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 SOX12O15370 315 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 PER1O15534 1290 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 PPP2R1AP30153 589 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 MTHFSP49914 203 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 IFFO2Q5TF58 517 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 DCAF5Q96JK2 942 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 POLKQ9UBT6 870 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 COL5A2P05997 1499 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 U2AF1L5P0DN76 240 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 U2AF1Q01081 240 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 TEFQ10587 303 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 CARD14Q9BXL6 1004 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 IGSF1Q8N6C5 1336 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 MAP3K5Q99683 1374 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 KIF20BQ96Q89 1820 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 PHRF1Q9P1Y6 1649 aaKnown RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 HSP90B1P14625 803 aaKnown RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 CDK11BP21127 795 aaKnown RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 TMEM132AQ24JP5 1023 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 AKAP4Q5JQC9 854 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 CABLES1Q8TDN4 633 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
PTPN22-211ENST00000538253 TNS2Q63HR2 1409 aa4.66□□□□□ -1.66
PTPN22-211ENST00000538253 NFAT5O94916 1531 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 CHRNA2Q15822 529 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 SLC27A3Q5K4L6 730 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 TTC5Q8N0Z6 440 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 LTV1Q96GA3 475 aaPredicted RBP4.65□□□□□ -1.66
PTPN22-211ENST00000538253 PRKRIP1Q9H875 184 aaPredicted RBP4.65□□□□□ -1.66
PTPN22-211ENST00000538253 A0A087WZG4 1122 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 ZNF530Q6P9A1 599 aaPredicted RBP4.65□□□□□ -1.66
PTPN22-211ENST00000538253 RUNDC1Q96C34 613 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 HDAC5Q9UQL6 1122 aa4.65□□□□□ -1.66
PTPN22-211ENST00000538253 ANKRD26Q9UPS8 1709 aa4.65□□□□□ -1.67
PTPN22-211ENST00000538253 MRS2Q9HD23 443 aa4.65□□□□□ -1.67
PTPN22-211ENST00000538253 EIF4A2Q14240 407 aaKnown RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 NAP1L5Q96NT1 182 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 TMOD3Q9NYL9 352 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 RGL2O15211 777 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 TNNT2P45379 298 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 CABP4P57796 275 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 FAM98CQ17RN3 349 aaKnown RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 LARP1Q6PKG0 1096 aaKnown RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 BCL9LQ86UU0 1499 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 PIK3C2AO00443 1686 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 LRP6O75581 1613 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 GNAT3A8MTJ3 354 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 RRS1Q15050 365 aaKnown RBP4.64□□□□□ -1.67
PTPN22-211ENST00000538253 MYH16Q9H6N6 1097 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 STK32BQ9NY57 414 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 EMILIN1Q9Y6C2 1016 aa4.64□□□□□ -1.67
PTPN22-211ENST00000538253 MARF1Q9Y4F3 1742 aaKnown RBP4.63□□□□□ -1.67
PTPN22-211ENST00000538253 KDRP35968 1356 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 IL13P35225 146 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 NKX1-1Q15270 411 aaPredicted RBP4.63□□□□□ -1.67
PTPN22-211ENST00000538253 SULT6B1Q6IMI4 303 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 ZNF428Q96B54 188 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 CHMP4BQ9H444 224 aaKnown RBP4.63□□□□□ -1.67
PTPN22-211ENST00000538253 TSHZ2Q9NRE2 1034 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 PDZRN3Q9UPQ7 1066 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 IL16Q14005 1332 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 ERBB4Q15303 1308 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 GNAI1P63096 354 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 NFE2L2Q16236 605 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 ZRANB1Q9UGI0 708 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 PLSCR1O15162 318 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms