RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
DDB1-208ENST00000537120 SLC15A2Q16348 729 aa11.54□□□□□ -0.56
DDB1-208ENST00000537120 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
DDB1-208ENST00000537120 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
DDB1-208ENST00000537120 NSD3Q9BZ95 1437 aa11.53□□□□□ -0.56
DDB1-208ENST00000537120 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
DDB1-208ENST00000537120 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
DDB1-208ENST00000537120 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
DDB1-208ENST00000537120 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.56
DDB1-208ENST00000537120 EMILIN1Q9Y6C2 1016 aa11.52□□□□□ -0.57
DDB1-208ENST00000537120 RREB1Q92766 1687 aa11.52□□□□□ -0.57
DDB1-208ENST00000537120 PANK3Q9H999 370 aa11.51□□□□□ -0.57
DDB1-208ENST00000537120 INSRP06213 1382 aa11.51□□□□□ -0.57
DDB1-208ENST00000537120 FLT4P35916 1363 aa11.51□□□□□ -0.57
DDB1-208ENST00000537120 SLC27A3Q5K4L6 730 aa11.5□□□□□ -0.57
DDB1-208ENST00000537120 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
DDB1-208ENST00000537120 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
DDB1-208ENST00000537120 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
DDB1-208ENST00000537120 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
DDB1-208ENST00000537120 FAM208AQ9UK61 1670 aaKnown RBP11.49□□□□□ -0.57
DDB1-208ENST00000537120 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
DDB1-208ENST00000537120 KCNQ4P56696 695 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 KNSTRNQ9Y448 316 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
DDB1-208ENST00000537120 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
DDB1-208ENST00000537120 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 HMGB2P26583 209 aaKnown RBP11.47□□□□□ -0.57
DDB1-208ENST00000537120 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 POLKQ9UBT6 870 aa11.47□□□□□ -0.57
DDB1-208ENST00000537120 CCNL1Q9UK58 526 aaPredicted RBP11.47□□□□□ -0.57
DDB1-208ENST00000537120 NHSQ6T4R5 1651 aa11.46□□□□□ -0.57
DDB1-208ENST00000537120 EYA1Q99502 592 aa11.46□□□□□ -0.57
DDB1-208ENST00000537120 BTAF1O14981 1849 aa11.46□□□□□ -0.58
DDB1-208ENST00000537120 MEGF6O75095 1541 aa11.45□□□□□ -0.58
DDB1-208ENST00000537120 POLD1P28340 1107 aa11.45□□□□□ -0.58
DDB1-208ENST00000537120 ZNF827Q17R98 1081 aa11.45□□□□□ -0.58
DDB1-208ENST00000537120 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
DDB1-208ENST00000537120 MAP2P11137 1827 aaKnown RBP11.44□□□□□ -0.58
DDB1-208ENST00000537120 SLC16A10Q8TF71 515 aa11.44□□□□□ -0.58
DDB1-208ENST00000537120 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
DDB1-208ENST00000537120 ARXQ96QS3 562 aa11.44□□□□□ -0.58
DDB1-208ENST00000537120 CYP27B1O15528 508 aa11.43□□□□□ -0.58
DDB1-208ENST00000537120 PTGER2P43116 358 aa11.43□□□□□ -0.58
DDB1-208ENST00000537120 EIF4A2Q14240 407 aaKnown RBP11.43□□□□□ -0.58
DDB1-208ENST00000537120 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
DDB1-208ENST00000537120 YY1P25490 414 aa11.42□□□□□ -0.58
DDB1-208ENST00000537120 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
DDB1-208ENST00000537120 IFNL2Q8IZJ0 200 aa11.42□□□□□ -0.58
DDB1-208ENST00000537120 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
DDB1-208ENST00000537120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDB1-208ENST00000537120 TMOD3Q9NYL9 352 aa11.42□□□□□ -0.58
DDB1-208ENST00000537120 MYOM1P52179 1685 aa11.42□□□□□ -0.58
DDB1-208ENST00000537120 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
DDB1-208ENST00000537120 SYT17Q9BSW7 474 aa11.41□□□□□ -0.58
DDB1-208ENST00000537120 PIGBQ92521 554 aa11.4□□□□□ -0.58
DDB1-208ENST00000537120 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 PHKG2P15735 406 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
DDB1-208ENST00000537120 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
DDB1-208ENST00000537120 FLAD1Q8NFF5 587 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 AK7Q96M32 723 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 NSD2O96028 1365 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 CASZ1Q86V15 1759 aa11.39□□□□□ -0.59
DDB1-208ENST00000537120 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
DDB1-208ENST00000537120 GPR162Q16538 588 aa11.38□□□□□ -0.59
DDB1-208ENST00000537120 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
DDB1-208ENST00000537120 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
DDB1-208ENST00000537120 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
DDB1-208ENST00000537120 CABP4P57796 275 aa11.37□□□□□ -0.59
DDB1-208ENST00000537120 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
DDB1-208ENST00000537120 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
DDB1-208ENST00000537120 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
DDB1-208ENST00000537120 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
DDB1-208ENST00000537120 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
DDB1-208ENST00000537120 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 PHF14O94880 888 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 MTHFSP49914 203 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 SIK1P57059 783 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
DDB1-208ENST00000537120 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
DDB1-208ENST00000537120 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
DDB1-208ENST00000537120 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
DDB1-208ENST00000537120 DCAF5Q96JK2 942 aa11.35□□□□□ -0.59
DDB1-208ENST00000537120 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
DDB1-208ENST00000537120 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
DDB1-208ENST00000537120 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
DDB1-208ENST00000537120 LY75O60449 1722 aa11.33□□□□□ -0.6
DDB1-208ENST00000537120 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
DDB1-208ENST00000537120 IL13P35225 146 aa11.33□□□□□ -0.6
DDB1-208ENST00000537120 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms