RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 ILDR2Q71H61 639 aa19.39■□□□□ 0.69
SOD2-209ENST00000535561 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
SOD2-209ENST00000535561 BCL9O00512 1426 aa19.39■□□□□ 0.69
SOD2-209ENST00000535561 FCHSD2O94868 740 aa19.38■□□□□ 0.69
SOD2-209ENST00000535561 RGPD2P0DJD1 1756 aa19.38■□□□□ 0.69
SOD2-209ENST00000535561 PCDH11XQ9BZA7 1347 aa19.37■□□□□ 0.69
SOD2-209ENST00000535561 PCDH11YQ9BZA8 1340 aa19.37■□□□□ 0.69
SOD2-209ENST00000535561 U2AF1L5P0DN76 240 aaPredicted RBP19.37■□□□□ 0.69
SOD2-209ENST00000535561 U2AF1Q01081 240 aaKnown RBP eCLIP19.37■□□□□ 0.69
SOD2-209ENST00000535561 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
SOD2-209ENST00000535561 FAM196AQ6ZSG2 479 aa19.37■□□□□ 0.69
SOD2-209ENST00000535561 AEBP1Q8IUX7 1158 aa19.37■□□□□ 0.69
SOD2-209ENST00000535561 PNNQ9H307 717 aaKnown RBP19.37■□□□□ 0.69
SOD2-209ENST00000535561 PLEKHO1Q53GL0 409 aaPredicted RBP19.36■□□□□ 0.69
SOD2-209ENST00000535561 HMOX1P09601 288 aa19.34■□□□□ 0.69
SOD2-209ENST00000535561 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
SOD2-209ENST00000535561 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
SOD2-209ENST00000535561 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.68
SOD2-209ENST00000535561 PKD1L3Q7Z443 1732 aa19.33■□□□□ 0.68
SOD2-209ENST00000535561 BRWD3Q6RI45 1802 aa19.32■□□□□ 0.68
SOD2-209ENST00000535561 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
SOD2-209ENST00000535561 NKX1-1Q15270 411 aaPredicted RBP19.31■□□□□ 0.68
SOD2-209ENST00000535561 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
SOD2-209ENST00000535561 NEFMP07197 916 aa19.3■□□□□ 0.68
SOD2-209ENST00000535561 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
SOD2-209ENST00000535561 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
SOD2-209ENST00000535561 IFNL2Q8IZJ0 200 aa19.3■□□□□ 0.68
SOD2-209ENST00000535561 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
SOD2-209ENST00000535561 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
SOD2-209ENST00000535561 CYP27B1O15528 508 aa19.29■□□□□ 0.68
SOD2-209ENST00000535561 GAS2L2Q8NHY3 880 aa19.29■□□□□ 0.68
SOD2-209ENST00000535561 PHKG2P15735 406 aa19.28■□□□□ 0.68
SOD2-209ENST00000535561 C1orf141Q5JVX7 400 aa19.28■□□□□ 0.68
SOD2-209ENST00000535561 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
SOD2-209ENST00000535561 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
SOD2-209ENST00000535561 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
SOD2-209ENST00000535561 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
SOD2-209ENST00000535561 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
SOD2-209ENST00000535561 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
SOD2-209ENST00000535561 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
SOD2-209ENST00000535561 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
SOD2-209ENST00000535561 MTHFSDQ2M296 383 aaKnown RBP19.24■□□□□ 0.67
SOD2-209ENST00000535561 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
SOD2-209ENST00000535561 FAM182BQ5T319 152 aa19.24■□□□□ 0.67
SOD2-209ENST00000535561 PHACTR3Q96KR7 559 aa19.24■□□□□ 0.67
SOD2-209ENST00000535561 BCL11BQ9C0K0 894 aaPredicted RBP19.24■□□□□ 0.67
SOD2-209ENST00000535561 SOCS7O14512 581 aa19.22■□□□□ 0.67
SOD2-209ENST00000535561 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
SOD2-209ENST00000535561 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
SOD2-209ENST00000535561 EP400Q96L91 3159 aa19.22■□□□□ 0.67
SOD2-209ENST00000535561 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
SOD2-209ENST00000535561 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
SOD2-209ENST00000535561 SF3B2Q13435 895 aaKnown RBP19.21■□□□□ 0.67
SOD2-209ENST00000535561 UPF1Q92900 1129 aaKnown RBP eCLIP19.21■□□□□ 0.67
SOD2-209ENST00000535561 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
SOD2-209ENST00000535561 TRIM37O94972 964 aa19.19■□□□□ 0.66
SOD2-209ENST00000535561 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
SOD2-209ENST00000535561 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
SOD2-209ENST00000535561 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
SOD2-209ENST00000535561 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
SOD2-209ENST00000535561 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
SOD2-209ENST00000535561 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
SOD2-209ENST00000535561 MIER1Q8N108 512 aa19.16■□□□□ 0.66
SOD2-209ENST00000535561 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
SOD2-209ENST00000535561 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
SOD2-209ENST00000535561 RNMTO43148 476 aaKnown RBP19.15■□□□□ 0.66
SOD2-209ENST00000535561 KCNQ2O43526 872 aa19.15■□□□□ 0.66
SOD2-209ENST00000535561 BAG6P46379 1132 aa19.15■□□□□ 0.66
SOD2-209ENST00000535561 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
SOD2-209ENST00000535561 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
SOD2-209ENST00000535561 CEMIPQ8WUJ3 1361 aa19.15■□□□□ 0.66
SOD2-209ENST00000535561 PLSCR1O15162 318 aa19.14■□□□□ 0.65
SOD2-209ENST00000535561 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
SOD2-209ENST00000535561 CABP4P57796 275 aa19.14■□□□□ 0.65
SOD2-209ENST00000535561 SYTL4Q96C24 671 aaPredicted RBP19.14■□□□□ 0.65
SOD2-209ENST00000535561 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
SOD2-209ENST00000535561 APBA3O96018 575 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
SOD2-209ENST00000535561 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 SLC52A2Q9HAB3 445 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 MRC1P22897 1456 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 DOT1LQ8TEK3 1739 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 SBF2Q86WG5 1849 aa19.13■□□□□ 0.65
SOD2-209ENST00000535561 NGEFQ8N5V2 710 aa19.12■□□□□ 0.65
SOD2-209ENST00000535561 PIGBQ92521 554 aa19.12■□□□□ 0.65
SOD2-209ENST00000535561 SMARCC1Q92922 1105 aaPredicted RBP19.12■□□□□ 0.65
SOD2-209ENST00000535561 TNS1Q9HBL0 1735 aaKnown RBP19.11■□□□□ 0.65
SOD2-209ENST00000535561 RIPK4P57078 832 aa19.11■□□□□ 0.65
SOD2-209ENST00000535561 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
SOD2-209ENST00000535561 LGR6Q9HBX8 967 aa19.11■□□□□ 0.65
SOD2-209ENST00000535561 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
SOD2-209ENST00000535561 TEFQ10587 303 aa19.1■□□□□ 0.65
SOD2-209ENST00000535561 PTF1AQ7RTS3 328 aa19.1■□□□□ 0.65
SOD2-209ENST00000535561 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
SOD2-209ENST00000535561 NFATC2IPQ8NCF5 419 aa19.09■□□□□ 0.65
SOD2-209ENST00000535561 RGPD3A6NKT7 1758 aaPredicted RBP19.09■□□□□ 0.65
SOD2-209ENST00000535561 RGPD4Q7Z3J3 1758 aa19.09■□□□□ 0.65
SOD2-209ENST00000535561 APAF1O14727 1248 aa19.08■□□□□ 0.64
SOD2-209ENST00000535561 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
SOD2-209ENST00000535561 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms