RNA–Protein interactions for RNA: ENST00000534992.5

FANCA-204, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-204ENST00000534992 NMRK2Q9NPI5 230 aa19.8■□□□□ 0.76
FANCA-204ENST00000534992 NFAT5O94916 1531 aa19.8■□□□□ 0.76
FANCA-204ENST00000534992 CICQ96RK0 1608 aaPredicted RBP19.8■□□□□ 0.76
FANCA-204ENST00000534992 ERBB3P21860 1342 aa19.79■□□□□ 0.76
FANCA-204ENST00000534992 PCNTO95613 3336 aa19.79■□□□□ 0.76
FANCA-204ENST00000534992 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
FANCA-204ENST00000534992 ANKRD36BQ8N2N9 1353 aa19.78■□□□□ 0.76
FANCA-204ENST00000534992 C5P01031 1676 aa19.78■□□□□ 0.76
FANCA-204ENST00000534992 USP47Q96K76 1375 aa19.76■□□□□ 0.75
FANCA-204ENST00000534992 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
FANCA-204ENST00000534992 FSTL1Q12841 308 aa19.76■□□□□ 0.75
FANCA-204ENST00000534992 LTN1O94822 1766 aa19.75■□□□□ 0.75
FANCA-204ENST00000534992 HSPA1AP0DMV8 641 aaKnown RBP19.75■□□□□ 0.75
FANCA-204ENST00000534992 HSPA1BP0DMV9 641 aaKnown RBP19.75■□□□□ 0.75
FANCA-204ENST00000534992 TTC21BQ7Z4L5 1316 aa19.75■□□□□ 0.75
FANCA-204ENST00000534992 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
FANCA-204ENST00000534992 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
FANCA-204ENST00000534992 TTC21AQ8NDW8 1320 aa19.74■□□□□ 0.75
FANCA-204ENST00000534992 PCDH10Q9P2E7 1040 aa19.73■□□□□ 0.75
FANCA-204ENST00000534992 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
FANCA-204ENST00000534992 ANKRD24Q8TF21 1146 aa19.72■□□□□ 0.75
FANCA-204ENST00000534992 USP54Q70EL1 1684 aa19.7■□□□□ 0.74
FANCA-204ENST00000534992 NSD2O96028 1365 aa19.7■□□□□ 0.74
FANCA-204ENST00000534992 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
FANCA-204ENST00000534992 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
FANCA-204ENST00000534992 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
FANCA-204ENST00000534992 ARHGAP27Q6ZUM4 889 aa19.68■□□□□ 0.74
FANCA-204ENST00000534992 AK7Q96M32 723 aa19.68■□□□□ 0.74
FANCA-204ENST00000534992 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
FANCA-204ENST00000534992 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
FANCA-204ENST00000534992 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
FANCA-204ENST00000534992 PHF14O94880 888 aa19.66■□□□□ 0.74
FANCA-204ENST00000534992 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
FANCA-204ENST00000534992 SMC1BQ8NDV3 1235 aa19.65■□□□□ 0.74
FANCA-204ENST00000534992 PKD1L3Q7Z443 1732 aa19.65■□□□□ 0.74
FANCA-204ENST00000534992 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
FANCA-204ENST00000534992 KTN1Q86UP2 1357 aaKnown RBP19.64■□□□□ 0.73
FANCA-204ENST00000534992 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
FANCA-204ENST00000534992 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
FANCA-204ENST00000534992 N4BP2Q86UW6 1770 aaPredicted RBP19.62■□□□□ 0.73
FANCA-204ENST00000534992 KCPQ6ZWJ8 1503 aa19.62■□□□□ 0.73
FANCA-204ENST00000534992 PXDNLA1KZ92 1463 aa19.61■□□□□ 0.73
FANCA-204ENST00000534992 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
FANCA-204ENST00000534992 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
FANCA-204ENST00000534992 MON2Q7Z3U7 1717 aa19.6■□□□□ 0.73
FANCA-204ENST00000534992 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
FANCA-204ENST00000534992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
FANCA-204ENST00000534992 C10orf71Q711Q0 1435 aa19.59■□□□□ 0.73
FANCA-204ENST00000534992 TOGARAM1Q9Y4F4 1720 aa19.59■□□□□ 0.73
FANCA-204ENST00000534992 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
FANCA-204ENST00000534992 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.59■□□□□ 0.73
FANCA-204ENST00000534992 ZCRB1Q8TBF4 217 aaKnown RBP19.59■□□□□ 0.73
FANCA-204ENST00000534992 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
FANCA-204ENST00000534992 FCHSD2O94868 740 aa19.58■□□□□ 0.72
FANCA-204ENST00000534992 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
FANCA-204ENST00000534992 RRAGCQ9HB90 399 aa19.58■□□□□ 0.72
FANCA-204ENST00000534992 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
FANCA-204ENST00000534992 TGFB2P61812 414 aa19.56■□□□□ 0.72
FANCA-204ENST00000534992 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
FANCA-204ENST00000534992 USP31Q70CQ4 1352 aa19.56■□□□□ 0.72
FANCA-204ENST00000534992 A0A0G2JLW4 131 aa19.54■□□□□ 0.72
FANCA-204ENST00000534992 MMP10P09238 476 aa19.54■□□□□ 0.72
FANCA-204ENST00000534992 SSFA2P28290 1259 aa19.54■□□□□ 0.72
FANCA-204ENST00000534992 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
FANCA-204ENST00000534992 RNF181Q9P0P0 153 aa19.54■□□□□ 0.72
FANCA-204ENST00000534992 NME9Q86XW9 330 aa19.53■□□□□ 0.72
FANCA-204ENST00000534992 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
FANCA-204ENST00000534992 MEGF6O75095 1541 aa19.52■□□□□ 0.72
FANCA-204ENST00000534992 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
FANCA-204ENST00000534992 SMIM5Q71RC9 77 aa19.51■□□□□ 0.71
FANCA-204ENST00000534992 AMIGO3Q86WK7 504 aa19.51■□□□□ 0.71
FANCA-204ENST00000534992 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
FANCA-204ENST00000534992 BRCA1P38398 1863 aaKnown RBP19.51■□□□□ 0.71
FANCA-204ENST00000534992 IP6K1Q92551 441 aa19.5■□□□□ 0.71
FANCA-204ENST00000534992 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
FANCA-204ENST00000534992 DPEP1P16444 411 aa19.48■□□□□ 0.71
FANCA-204ENST00000534992 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
FANCA-204ENST00000534992 GNPATO15228 680 aa19.47■□□□□ 0.71
FANCA-204ENST00000534992 AIDAQ96BJ3 306 aa19.47■□□□□ 0.71
FANCA-204ENST00000534992 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
FANCA-204ENST00000534992 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
FANCA-204ENST00000534992 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
FANCA-204ENST00000534992 ITGB4P16144 1822 aa19.45■□□□□ 0.7
FANCA-204ENST00000534992 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
FANCA-204ENST00000534992 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
FANCA-204ENST00000534992 FOXN1O15353 648 aa19.44■□□□□ 0.7
FANCA-204ENST00000534992 C4AP0C0L4 1744 aa19.43■□□□□ 0.7
FANCA-204ENST00000534992 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
FANCA-204ENST00000534992 AMPHP49418 695 aa19.43■□□□□ 0.7
FANCA-204ENST00000534992 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
FANCA-204ENST00000534992 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
FANCA-204ENST00000534992 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
FANCA-204ENST00000534992 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
FANCA-204ENST00000534992 SBF1O95248 1867 aa19.43■□□□□ 0.7
FANCA-204ENST00000534992 SBNO2Q9Y2G9 1366 aa19.43■□□□□ 0.7
FANCA-204ENST00000534992 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
FANCA-204ENST00000534992 CTCFP49711 727 aaPredicted RBP19.42■□□□□ 0.7
FANCA-204ENST00000534992 MLLT1Q03111 559 aaPredicted RBP19.42■□□□□ 0.7
FANCA-204ENST00000534992 NLGN1Q8N2Q7 840 aa19.42■□□□□ 0.7
FANCA-204ENST00000534992 LINC00116Q8NCU8 138 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms