RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 QSER1Q2KHR3 1735 aa14.2□□□□□ -0.14
CLSTN3-203ENST00000534830 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 MSH5O43196 834 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 KCNQ4P56696 695 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 SLC27A3Q5K4L6 730 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 NLRP2Q9NX02 1062 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
CLSTN3-203ENST00000534830 IL2RBP14784 551 aa14.18□□□□□ -0.14
CLSTN3-203ENST00000534830 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
CLSTN3-203ENST00000534830 TIMELESSQ9UNS1 1208 aa14.17□□□□□ -0.14
CLSTN3-203ENST00000534830 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
CLSTN3-203ENST00000534830 USP47Q96K76 1375 aa14.15□□□□□ -0.14
CLSTN3-203ENST00000534830 ERBB3P21860 1342 aa14.15□□□□□ -0.15
CLSTN3-203ENST00000534830 ANKRD36BQ8N2N9 1353 aa14.14□□□□□ -0.15
CLSTN3-203ENST00000534830 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
CLSTN3-203ENST00000534830 DDX54Q8TDD1 881 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-203ENST00000534830 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-203ENST00000534830 ADCY9O60503 1353 aa14.12□□□□□ -0.15
CLSTN3-203ENST00000534830 TMF1P82094 1093 aa14.12□□□□□ -0.15
CLSTN3-203ENST00000534830 APLP1P51693 650 aa14.11□□□□□ -0.15
CLSTN3-203ENST00000534830 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-203ENST00000534830 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
CLSTN3-203ENST00000534830 IP6K1Q92551 441 aa14.11□□□□□ -0.15
CLSTN3-203ENST00000534830 PRIM1P49642 420 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-203ENST00000534830 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-203ENST00000534830 WWC3Q9ULE0 1092 aa14.1□□□□□ -0.15
CLSTN3-203ENST00000534830 CD2APQ9Y5K6 639 aa14.1□□□□□ -0.15
CLSTN3-203ENST00000534830 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-203ENST00000534830 KIF3CO14782 793 aa14.09□□□□□ -0.15
CLSTN3-203ENST00000534830 FYB1O15117 783 aa14.09□□□□□ -0.15
CLSTN3-203ENST00000534830 CAPN15O75808 1086 aa14.09□□□□□ -0.15
CLSTN3-203ENST00000534830 FBLN1P23142 703 aa14.08□□□□□ -0.16
CLSTN3-203ENST00000534830 COG3Q96JB2 828 aa14.08□□□□□ -0.16
CLSTN3-203ENST00000534830 RGPD2P0DJD1 1756 aa14.08□□□□□ -0.16
CLSTN3-203ENST00000534830 LY75O60449 1722 aa14.07□□□□□ -0.16
CLSTN3-203ENST00000534830 KIF20BQ96Q89 1820 aa14.07□□□□□ -0.16
CLSTN3-203ENST00000534830 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
CLSTN3-203ENST00000534830 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
CLSTN3-203ENST00000534830 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
CLSTN3-203ENST00000534830 HOXC9P31274 260 aa14.06□□□□□ -0.16
CLSTN3-203ENST00000534830 DNAJC5GQ8N7S2 189 aa14.06□□□□□ -0.16
CLSTN3-203ENST00000534830 DOT1LQ8TEK3 1739 aa14.05□□□□□ -0.16
CLSTN3-203ENST00000534830 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-203ENST00000534830 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-203ENST00000534830 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
CLSTN3-203ENST00000534830 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
CLSTN3-203ENST00000534830 NSD2O96028 1365 aa14.04□□□□□ -0.16
CLSTN3-203ENST00000534830 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
CLSTN3-203ENST00000534830 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
CLSTN3-203ENST00000534830 TOMM70O94826 608 aa14.02□□□□□ -0.17
CLSTN3-203ENST00000534830 AMPHP49418 695 aa14.02□□□□□ -0.17
CLSTN3-203ENST00000534830 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-203ENST00000534830 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
CLSTN3-203ENST00000534830 MAP2P11137 1827 aaKnown RBP14□□□□□ -0.17
CLSTN3-203ENST00000534830 TNS4Q8IZW8 715 aa14□□□□□ -0.17
CLSTN3-203ENST00000534830 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
CLSTN3-203ENST00000534830 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
CLSTN3-203ENST00000534830 C5P01031 1676 aa13.99□□□□□ -0.17
CLSTN3-203ENST00000534830 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
CLSTN3-203ENST00000534830 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
CLSTN3-203ENST00000534830 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
CLSTN3-203ENST00000534830 ANKRD26Q9UPS8 1709 aa13.98□□□□□ -0.17
CLSTN3-203ENST00000534830 INSRP06213 1382 aa13.98□□□□□ -0.17
CLSTN3-203ENST00000534830 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
CLSTN3-203ENST00000534830 MEGF6O75095 1541 aa13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 PRELPP51888 382 aa13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 HTRA3P83110 453 aa13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 KLRG1Q96E93 195 aa13.97□□□□□ -0.17
CLSTN3-203ENST00000534830 FLT4P35916 1363 aa13.96□□□□□ -0.17
CLSTN3-203ENST00000534830 PHF14O94880 888 aa13.96□□□□□ -0.17
CLSTN3-203ENST00000534830 AK7Q96M32 723 aa13.96□□□□□ -0.17
CLSTN3-203ENST00000534830 NMRK2Q9NPI5 230 aa13.96□□□□□ -0.17
CLSTN3-203ENST00000534830 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
CLSTN3-203ENST00000534830 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
CLSTN3-203ENST00000534830 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLSTN3-203ENST00000534830 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
CLSTN3-203ENST00000534830 C16orf71Q8IYS4 520 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-203ENST00000534830 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 SLC34A2O95436 690 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
CLSTN3-203ENST00000534830 SMG6Q86US8 1419 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
CLSTN3-203ENST00000534830 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
CLSTN3-203ENST00000534830 ARHGAP27Q6ZUM4 889 aa13.92□□□□□ -0.18
CLSTN3-203ENST00000534830 USHBP1Q8N6Y0 703 aa13.92□□□□□ -0.18
CLSTN3-203ENST00000534830 CICQ96RK0 1608 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-203ENST00000534830 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
CLSTN3-203ENST00000534830 PCNTO95613 3336 aa13.91□□□□□ -0.18
CLSTN3-203ENST00000534830 PKD1L3Q7Z443 1732 aa13.91□□□□□ -0.18
CLSTN3-203ENST00000534830 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms